RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 SCAND2PQ9GZW5 306 aaPredicted RBP5.54□□□□□ -1.52
PMS1-203ENST00000409593 POGKQ9P215 609 aa5.54□□□□□ -1.52
PMS1-203ENST00000409593 CLCA2Q9UQC9 943 aa5.54□□□□□ -1.52
PMS1-203ENST00000409593 SHTN1A0MZ66 631 aa5.53□□□□□ -1.52
PMS1-203ENST00000409593 FAM171A2A8MVW0 826 aa5.53□□□□□ -1.52
PMS1-203ENST00000409593 GABRDO14764 452 aa5.53□□□□□ -1.52
PMS1-203ENST00000409593 RECQL4O94761 1208 aa5.53□□□□□ -1.52
PMS1-203ENST00000409593 APOBEC3AP31941 199 aaPredicted RBP5.53□□□□□ -1.52
PMS1-203ENST00000409593 SREBF1P36956 1147 aa5.53□□□□□ -1.52
PMS1-203ENST00000409593 RAP2BP61225 183 aa5.53□□□□□ -1.52
PMS1-203ENST00000409593 SLC25A3Q00325 362 aa5.53□□□□□ -1.52
PMS1-203ENST00000409593 MGAT2Q10469 447 aa5.53□□□□□ -1.52
PMS1-203ENST00000409593 METTL24Q5JXM2 366 aa5.53□□□□□ -1.52
PMS1-203ENST00000409593 IGFL4Q6B9Z1 124 aa5.53□□□□□ -1.52
PMS1-203ENST00000409593 ZNF572Q7Z3I7 529 aaPredicted RBP5.53□□□□□ -1.52
PMS1-203ENST00000409593 PNMA8AQ86V59 439 aaPredicted RBP5.53□□□□□ -1.52
PMS1-203ENST00000409593 OR10H5Q8NGA6 315 aa5.53□□□□□ -1.52
PMS1-203ENST00000409593 SLC35B2Q8TB61 432 aa5.53□□□□□ -1.52
PMS1-203ENST00000409593 NRG4Q8WWG1 115 aa5.53□□□□□ -1.52
PMS1-203ENST00000409593 STON2Q8WXE9 905 aa5.53□□□□□ -1.52
PMS1-203ENST00000409593 SSH1Q8WYL5 1049 aa5.53□□□□□ -1.52
PMS1-203ENST00000409593 JADE3Q92613 823 aa5.53□□□□□ -1.52
PMS1-203ENST00000409593 DPF2Q92785 391 aa5.53□□□□□ -1.52
PMS1-203ENST00000409593 FAXDC2Q96IV6 333 aa5.53□□□□□ -1.52
PMS1-203ENST00000409593 SLC2A4RGQ9NR83 387 aa5.53□□□□□ -1.52
PMS1-203ENST00000409593 SRRDQ9UH36 339 aa5.53□□□□□ -1.52
PMS1-203ENST00000409593 MRFAP1Q9Y605 127 aa5.53□□□□□ -1.52
PMS1-203ENST00000409593 KLHL33A6NCF5 533 aa5.53□□□□□ -1.52
PMS1-203ENST00000409593 TBKBP1A7MCY6 615 aa5.53□□□□□ -1.52
PMS1-203ENST00000409593 CXorf49A8MYA2 514 aaPredicted RBP5.53□□□□□ -1.52
PMS1-203ENST00000409593 NDUFS2O75306 463 aa5.53□□□□□ -1.52
PMS1-203ENST00000409593 ABHD18Q0P651 414 aa5.53□□□□□ -1.52
PMS1-203ENST00000409593 SEPT2Q15019 361 aa5.53□□□□□ -1.52
PMS1-203ENST00000409593 PTPN21Q16825 1174 aa5.53□□□□□ -1.52
PMS1-203ENST00000409593 FAM47AQ5JRC9 791 aa5.53□□□□□ -1.52
PMS1-203ENST00000409593 AFMIDQ63HM1 303 aa5.53□□□□□ -1.52
PMS1-203ENST00000409593 EFCAB12Q6NXP0 572 aa5.53□□□□□ -1.52
PMS1-203ENST00000409593 ZNF276Q8N554 614 aa5.53□□□□□ -1.52
PMS1-203ENST00000409593 SLC16A11Q8NCK7 471 aa5.53□□□□□ -1.52
PMS1-203ENST00000409593 CCHCR1Q8TD31 782 aa5.53□□□□□ -1.52
PMS1-203ENST00000409593 ZNF483Q8TF39 744 aaPredicted RBP5.53□□□□□ -1.52
PMS1-203ENST00000409593 HOXB13Q92826 284 aaPredicted RBP5.53□□□□□ -1.52
PMS1-203ENST00000409593 NDC1Q9BTX1 674 aa5.53□□□□□ -1.52
PMS1-203ENST00000409593 HOMER2Q9NSB8 354 aa5.53□□□□□ -1.52
PMS1-203ENST00000409593 TMEM140Q9NV12 185 aa5.53□□□□□ -1.52
PMS1-203ENST00000409593 AJAP1Q9UKB5 411 aaPredicted RBP5.53□□□□□ -1.52
PMS1-203ENST00000409593 INTUQ9ULD6 942 aa5.53□□□□□ -1.52
PMS1-203ENST00000409593 LEFTY2O00292 366 aa5.52□□□□□ -1.53
PMS1-203ENST00000409593 RBP3P10745 1247 aa5.52□□□□□ -1.53
PMS1-203ENST00000409593 IL2RBP14784 551 aa5.52□□□□□ -1.53
PMS1-203ENST00000409593 ALOX15P16050 662 aaPredicted RBP5.52□□□□□ -1.53
PMS1-203ENST00000409593 MGAT1P26572 445 aa5.52□□□□□ -1.53
PMS1-203ENST00000409593 SP140Q13342 867 aa5.52□□□□□ -1.53
PMS1-203ENST00000409593 PCBP2Q15366 365 aaKnown RBP eCLIP5.52□□□□□ -1.53
PMS1-203ENST00000409593 BMT2Q1RMZ1 405 aa5.52□□□□□ -1.53
PMS1-203ENST00000409593 GPRIN1Q7Z2K8 1008 aa5.52□□□□□ -1.53
PMS1-203ENST00000409593 ZFPM1Q8IX07 1006 aa5.52□□□□□ -1.53
PMS1-203ENST00000409593 OR2I1PQ8NGU4 316 aa5.52□□□□□ -1.53
PMS1-203ENST00000409593 ZFP28Q8NHY6 868 aa5.52□□□□□ -1.53
PMS1-203ENST00000409593 SLC25A43Q8WUT9 341 aaPredicted RBP5.52□□□□□ -1.53
PMS1-203ENST00000409593 FUBP3Q96I24 572 aaKnown RBP eCLIP5.52□□□□□ -1.53
PMS1-203ENST00000409593 GPATCH3Q96I76 525 aa5.52□□□□□ -1.53
PMS1-203ENST00000409593 PHACTR3Q96KR7 559 aa5.52□□□□□ -1.53
PMS1-203ENST00000409593 C7orf25Q9BPX7 421 aa5.52□□□□□ -1.53
PMS1-203ENST00000409593 KCNH6Q9H252 994 aa5.52□□□□□ -1.53
PMS1-203ENST00000409593 NRDE2Q9H7Z3 1164 aa5.52□□□□□ -1.53
PMS1-203ENST00000409593 MMRN2Q9H8L6 949 aa5.52□□□□□ -1.53
PMS1-203ENST00000409593 MOCS1Q9NZB8 636 aa5.52□□□□□ -1.53
PMS1-203ENST00000409593 TRPM5Q9NZQ8 1165 aa5.52□□□□□ -1.53
PMS1-203ENST00000409593 SAP30BPQ9UHR5 308 aaKnown RBP5.52□□□□□ -1.53
PMS1-203ENST00000409593 TUBD1Q9UJT1 453 aa5.52□□□□□ -1.53
PMS1-203ENST00000409593 WASHC2CQ9Y4E1 1318 aa5.52□□□□□ -1.53
PMS1-203ENST00000409593 GRXCR1A8MXD5 290 aa5.51□□□□□ -1.53
PMS1-203ENST00000409593 WNT10BO00744 389 aa5.51□□□□□ -1.53
PMS1-203ENST00000409593 TRIM24O15164 1050 aa5.51□□□□□ -1.53
PMS1-203ENST00000409593 NARSO43776 548 aaKnown RBP5.51□□□□□ -1.53
PMS1-203ENST00000409593 SNRPA1P09661 255 aaKnown RBP5.51□□□□□ -1.53
PMS1-203ENST00000409593 FPR1P21462 350 aa5.51□□□□□ -1.53
PMS1-203ENST00000409593 C5AR1P21730 350 aa5.51□□□□□ -1.53
PMS1-203ENST00000409593 MCM7P33993 719 aa5.51□□□□□ -1.53
PMS1-203ENST00000409593 ALDH1A3P47895 512 aa5.51□□□□□ -1.53
PMS1-203ENST00000409593 SLC16A1P53985 500 aa5.51□□□□□ -1.53
PMS1-203ENST00000409593 CLRN1P58418 232 aa5.51□□□□□ -1.53
PMS1-203ENST00000409593 NHLH2Q02577 135 aa5.51□□□□□ -1.53
PMS1-203ENST00000409593 CSRP2Q16527 193 aa5.51□□□□□ -1.53
PMS1-203ENST00000409593 ATXN7L2Q5T6C5 722 aaPredicted RBP5.51□□□□□ -1.53
PMS1-203ENST00000409593 MIGA2Q7L4E1 593 aa5.51□□□□□ -1.53
PMS1-203ENST00000409593 RHOT1Q8IXI2 618 aa5.51□□□□□ -1.53
PMS1-203ENST00000409593 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.51□□□□□ -1.53
PMS1-203ENST00000409593 CLIP3Q96DZ5 547 aa5.51□□□□□ -1.53
PMS1-203ENST00000409593 TEKT5Q96M29 485 aa5.51□□□□□ -1.53
PMS1-203ENST00000409593 RUVBL1Q9Y265 456 aaKnown RBP5.51□□□□□ -1.53
PMS1-203ENST00000409593 SIK3Q9Y2K2 1263 aa5.51□□□□□ -1.53
PMS1-203ENST00000409593 PJA2O43164 708 aa5.5□□□□□ -1.53
PMS1-203ENST00000409593 AKAP8O43823 692 aaKnown RBP5.5□□□□□ -1.53
PMS1-203ENST00000409593 PCDHGA12O60330 932 aa5.5□□□□□ -1.53
PMS1-203ENST00000409593 GPR32O75388 356 aa5.5□□□□□ -1.53
PMS1-203ENST00000409593 ADH4P08319 380 aa5.5□□□□□ -1.53
PMS1-203ENST00000409593 ATP5JP18859 108 aa5.5□□□□□ -1.53
PMS1-203ENST00000409593 MAKP20794 623 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms