RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 LIMCH1Q9UPQ0 1083 aa6.11□□□□□ -1.43
CLK1-202ENST00000409403 PIEZO1Q92508 2521 aa6.11□□□□□ -1.43
CLK1-202ENST00000409403 AOX1Q06278 1338 aa6.11□□□□□ -1.43
CLK1-202ENST00000409403 MYH14Q7Z406 1995 aaKnown RBP6.11□□□□□ -1.43
CLK1-202ENST00000409403 SLX4Q8IY92 1834 aa6.1□□□□□ -1.43
CLK1-202ENST00000409403 ZNF891A8MT65 544 aaPredicted RBP6.1□□□□□ -1.43
CLK1-202ENST00000409403 PES1O00541 588 aaKnown RBP6.1□□□□□ -1.43
CLK1-202ENST00000409403 MAP2K7O14733 419 aa6.1□□□□□ -1.43
CLK1-202ENST00000409403 ZEB2O60315 1214 aa6.1□□□□□ -1.43
CLK1-202ENST00000409403 DGKIO75912 1065 aa6.1□□□□□ -1.43
CLK1-202ENST00000409403 CELF2O95319 508 aaKnown RBP6.1□□□□□ -1.43
CLK1-202ENST00000409403 BPIP17213 487 aa6.1□□□□□ -1.43
CLK1-202ENST00000409403 SYT1P21579 422 aa6.1□□□□□ -1.43
CLK1-202ENST00000409403 NF2P35240 595 aa6.1□□□□□ -1.43
CLK1-202ENST00000409403 MECP2P51608 486 aaKnown RBP6.1□□□□□ -1.43
CLK1-202ENST00000409403 DSG1Q02413 1049 aa6.1□□□□□ -1.43
CLK1-202ENST00000409403 MVKQ03426 396 aa6.1□□□□□ -1.43
CLK1-202ENST00000409403 STAT4Q14765 748 aa6.1□□□□□ -1.43
CLK1-202ENST00000409403 ZMYM1Q5SVZ6 1142 aa6.1□□□□□ -1.43
CLK1-202ENST00000409403 MROH9Q5TGP6 573 aa6.1□□□□□ -1.43
CLK1-202ENST00000409403 RIOX2Q8IUF8 465 aa6.1□□□□□ -1.43
CLK1-202ENST00000409403 CEP57L1Q8IYX8 460 aa6.1□□□□□ -1.43
CLK1-202ENST00000409403 NXPE1Q8N323 547 aa6.1□□□□□ -1.43
CLK1-202ENST00000409403 CEP112Q8N8E3 955 aa6.1□□□□□ -1.43
CLK1-202ENST00000409403 C2orf69Q8N8R5 385 aa6.1□□□□□ -1.43
CLK1-202ENST00000409403 AGBL5Q8NDL9 886 aa6.1□□□□□ -1.43
CLK1-202ENST00000409403 NUP43Q8NFH3 380 aa6.1□□□□□ -1.43
CLK1-202ENST00000409403 CTCFLQ8NI51 663 aaPredicted RBP6.1□□□□□ -1.43
CLK1-202ENST00000409403 ANO10Q9NW15 660 aa6.1□□□□□ -1.43
CLK1-202ENST00000409403 MTMR10Q9NXD2 777 aa6.1□□□□□ -1.43
CLK1-202ENST00000409403 B4GALT6Q9UBX8 382 aa6.1□□□□□ -1.43
CLK1-202ENST00000409403 ACSL6Q9UKU0 697 aa6.1□□□□□ -1.43
CLK1-202ENST00000409403 USP27XA6NNY8 438 aa6.1□□□□□ -1.43
CLK1-202ENST00000409403 NOTOA8MTQ0 251 aa6.1□□□□□ -1.43
CLK1-202ENST00000409403 NPHP1O15259 732 aa6.1□□□□□ -1.43
CLK1-202ENST00000409403 GPR39O43194 453 aa6.1□□□□□ -1.43
CLK1-202ENST00000409403 PDE6AP16499 860 aa6.1□□□□□ -1.43
CLK1-202ENST00000409403 PRKCAP17252 672 aa6.1□□□□□ -1.43
CLK1-202ENST00000409403 MCM3P25205 808 aa6.1□□□□□ -1.43
CLK1-202ENST00000409403 MTHFSP49914 203 aa6.1□□□□□ -1.43
CLK1-202ENST00000409403 LACTBP83111 547 aaPredicted RBP6.1□□□□□ -1.43
CLK1-202ENST00000409403 CRYMQ14894 314 aa6.1□□□□□ -1.43
CLK1-202ENST00000409403 PLCL1Q15111 1095 aa6.1□□□□□ -1.43
CLK1-202ENST00000409403 ARHGAP44Q17R89 818 aa6.1□□□□□ -1.43
CLK1-202ENST00000409403 PLEKHG6Q3KR16 790 aa6.1□□□□□ -1.43
CLK1-202ENST00000409403 RNF219Q5W0B1 726 aaPredicted RBP6.1□□□□□ -1.43
CLK1-202ENST00000409403 PNMA8AQ86V59 439 aaPredicted RBP6.1□□□□□ -1.43
CLK1-202ENST00000409403 SIRT2Q8IXJ6 389 aa6.1□□□□□ -1.43
CLK1-202ENST00000409403 TEX11Q8IYF3 940 aa6.1□□□□□ -1.43
CLK1-202ENST00000409403 PAIP2Q9BPZ3 127 aaKnown RBP6.1□□□□□ -1.43
CLK1-202ENST00000409403 FUT8Q9BYC5 575 aa6.1□□□□□ -1.43
CLK1-202ENST00000409403 KRTAP9-9Q9BYP9 154 aa6.1□□□□□ -1.43
CLK1-202ENST00000409403 KRTAP9-4Q9BYQ2 154 aa6.1□□□□□ -1.43
CLK1-202ENST00000409403 IRF2BPLQ9H1B7 796 aa6.1□□□□□ -1.43
CLK1-202ENST00000409403 VEZTQ9HBM0 779 aa6.1□□□□□ -1.43
CLK1-202ENST00000409403 PDRG1Q9NUG6 133 aa6.1□□□□□ -1.43
CLK1-202ENST00000409403 TRMT1Q9NXH9 659 aaKnown RBP6.1□□□□□ -1.43
CLK1-202ENST00000409403 VPS18Q9P253 973 aa6.1□□□□□ -1.43
CLK1-202ENST00000409403 EXOC6BQ9Y2D4 811 aa6.1□□□□□ -1.43
CLK1-202ENST00000409403 TTC21AQ8NDW8 1320 aa6.09□□□□□ -1.43
CLK1-202ENST00000409403 CACNA1GO43497 2377 aa6.09□□□□□ -1.43
CLK1-202ENST00000409403 TCHHQ07283 1943 aa6.09□□□□□ -1.43
CLK1-202ENST00000409403 A0A1B0GUA9 196 aa6.09□□□□□ -1.43
CLK1-202ENST00000409403 A0A1W2PQJ5 194 aa6.09□□□□□ -1.43
CLK1-202ENST00000409403 PTPDC1A2A3K4 754 aa6.09□□□□□ -1.43
CLK1-202ENST00000409403 ZNF561-AS1K7EIQ3 104 aa6.09□□□□□ -1.43
CLK1-202ENST00000409403 NEMP1O14524 444 aa6.09□□□□□ -1.43
CLK1-202ENST00000409403 URI1O94763 535 aaPredicted RBP6.09□□□□□ -1.43
CLK1-202ENST00000409403 HPXP02790 462 aa6.09□□□□□ -1.43
CLK1-202ENST00000409403 GCFC2P16383 781 aaKnown RBP6.09□□□□□ -1.43
CLK1-202ENST00000409403 TACR1P25103 407 aa6.09□□□□□ -1.43
CLK1-202ENST00000409403 ELF1P32519 619 aa6.09□□□□□ -1.43
CLK1-202ENST00000409403 GDNFP39905 211 aa6.09□□□□□ -1.43
CLK1-202ENST00000409403 GUCY2FP51841 1108 aa6.09□□□□□ -1.43
CLK1-202ENST00000409403 IL2P60568 153 aa6.09□□□□□ -1.43
CLK1-202ENST00000409403 ICA1Q05084 483 aa6.09□□□□□ -1.43
CLK1-202ENST00000409403 PPP2R5AQ15172 486 aa6.09□□□□□ -1.43
CLK1-202ENST00000409403 GPR19Q15760 415 aa6.09□□□□□ -1.43
CLK1-202ENST00000409403 MAP9Q49MG5 647 aa6.09□□□□□ -1.43
CLK1-202ENST00000409403 AP1ARQ63HQ0 302 aa6.09□□□□□ -1.43
CLK1-202ENST00000409403 EP400NLQ6ZTU2 488 aa6.09□□□□□ -1.43
CLK1-202ENST00000409403 OTOP3Q7RTS5 596 aa6.09□□□□□ -1.43
CLK1-202ENST00000409403 NECAB2Q7Z6G3 386 aa6.09□□□□□ -1.43
CLK1-202ENST00000409403 ANKRD18AQ8IVF6 992 aa6.09□□□□□ -1.43
CLK1-202ENST00000409403 CCDC50Q8IVM0 306 aa6.09□□□□□ -1.43
CLK1-202ENST00000409403 TP53INP2Q8IXH6 220 aa6.09□□□□□ -1.43
CLK1-202ENST00000409403 ITFG2Q969R8 447 aa6.09□□□□□ -1.43
CLK1-202ENST00000409403 CABS1Q96KC9 395 aa6.09□□□□□ -1.43
CLK1-202ENST00000409403 PCMTD2Q9NV79 361 aa6.09□□□□□ -1.43
CLK1-202ENST00000409403 C19orf73Q9NVV2 129 aa6.09□□□□□ -1.43
CLK1-202ENST00000409403 FBLN5Q9UBX5 448 aa6.09□□□□□ -1.43
CLK1-202ENST00000409403 APOBEC2Q9Y235 224 aaKnown RBP6.09□□□□□ -1.43
CLK1-202ENST00000409403 BAHCC1Q9P281 2608 aa6.09□□□□□ -1.44
CLK1-202ENST00000409403 CHUKO15111 745 aa6.08□□□□□ -1.44
CLK1-202ENST00000409403 WNT11O96014 354 aa6.08□□□□□ -1.44
CLK1-202ENST00000409403 MSL3P1P0C860 447 aa6.08□□□□□ -1.44
CLK1-202ENST00000409403 RAC2P15153 192 aa6.08□□□□□ -1.44
CLK1-202ENST00000409403 ADCYAP1R1P41586 468 aa6.08□□□□□ -1.44
CLK1-202ENST00000409403 GNAI1P63096 354 aa6.08□□□□□ -1.44
CLK1-202ENST00000409403 EXOSC10Q01780 885 aaKnown RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms