RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 HARSP12081 509 aaKnown RBP19.66■□□□□ 0.74
PDLIM2-206ENST00000409141 IDEP14735 1019 aa19.66■□□□□ 0.74
PDLIM2-206ENST00000409141 KCNA5P22460 613 aa19.66■□□□□ 0.74
PDLIM2-206ENST00000409141 GRM5P41594 1212 aa19.66■□□□□ 0.74
PDLIM2-206ENST00000409141 MATR3P43243 847 aaKnown RBP eCLIP19.66■□□□□ 0.74
PDLIM2-206ENST00000409141 OSTNP61366 133 aa19.66■□□□□ 0.74
PDLIM2-206ENST00000409141 BMS1Q14692 1282 aaKnown RBP19.66■□□□□ 0.74
PDLIM2-206ENST00000409141 E2F4Q16254 413 aa19.66■□□□□ 0.74
PDLIM2-206ENST00000409141 TJAP1Q5JTD0 557 aa19.66■□□□□ 0.74
PDLIM2-206ENST00000409141 VPS52Q8N1B4 723 aa19.66■□□□□ 0.74
PDLIM2-206ENST00000409141 CEP120Q8N960 986 aa19.66■□□□□ 0.74
PDLIM2-206ENST00000409141 KCNN1Q92952 543 aa19.66■□□□□ 0.74
PDLIM2-206ENST00000409141 CUEDC2Q9H467 287 aa19.66■□□□□ 0.74
PDLIM2-206ENST00000409141 ANKFY1Q9P2R3 1169 aa19.66■□□□□ 0.74
PDLIM2-206ENST00000409141 ABLIM1O14639 778 aa19.65■□□□□ 0.74
PDLIM2-206ENST00000409141 CLDN3O15551 220 aa19.65■□□□□ 0.74
PDLIM2-206ENST00000409141 THP07101 528 aa19.65■□□□□ 0.74
PDLIM2-206ENST00000409141 GAP43P17677 238 aa19.65■□□□□ 0.74
PDLIM2-206ENST00000409141 ABCD1P33897 745 aa19.65■□□□□ 0.74
PDLIM2-206ENST00000409141 CA8P35219 290 aa19.65■□□□□ 0.74
PDLIM2-206ENST00000409141 YARSP54577 528 aaKnown RBP19.65■□□□□ 0.74
PDLIM2-206ENST00000409141 RESP18Q5W5W9 173 aa19.65■□□□□ 0.74
PDLIM2-206ENST00000409141 SFR1Q86XK3 245 aa19.65■□□□□ 0.74
PDLIM2-206ENST00000409141 LEO1Q8WVC0 666 aaPredicted RBP19.65■□□□□ 0.74
PDLIM2-206ENST00000409141 STAMQ92783 540 aa19.65■□□□□ 0.74
PDLIM2-206ENST00000409141 FIZ1Q96SL8 496 aa19.65■□□□□ 0.74
PDLIM2-206ENST00000409141 COLEC11Q9BWP8 271 aa19.65■□□□□ 0.74
PDLIM2-206ENST00000409141 LRRC27Q9C0I9 530 aa19.65■□□□□ 0.74
PDLIM2-206ENST00000409141 CXCL16Q9H2A7 254 aa19.65■□□□□ 0.74
PDLIM2-206ENST00000409141 HIDE1A8MVS5 230 aa19.64■□□□□ 0.73
PDLIM2-206ENST00000409141 PTGESO14684 152 aa19.64■□□□□ 0.73
PDLIM2-206ENST00000409141 PER2O15055 1255 aa19.64■□□□□ 0.73
PDLIM2-206ENST00000409141 POLR2DO15514 142 aaKnown RBP19.64■□□□□ 0.73
PDLIM2-206ENST00000409141 CXCL14O95715 111 aa19.64■□□□□ 0.73
PDLIM2-206ENST00000409141 LIG4P49917 911 aa19.64■□□□□ 0.73
PDLIM2-206ENST00000409141 GTF2BQ00403 316 aa19.64■□□□□ 0.73
PDLIM2-206ENST00000409141 ADAM15Q13444 863 aa19.64■□□□□ 0.73
PDLIM2-206ENST00000409141 SMC1AQ14683 1233 aaKnown RBP19.64■□□□□ 0.73
PDLIM2-206ENST00000409141 NOLC1Q14978 699 aaKnown RBP eCLIP19.64■□□□□ 0.73
PDLIM2-206ENST00000409141 COL19A1Q14993 1142 aa19.64■□□□□ 0.73
PDLIM2-206ENST00000409141 ZC2HC1CQ53FD0 456 aaPredicted RBP19.64■□□□□ 0.73
PDLIM2-206ENST00000409141 ACAP3Q96P50 834 aa19.64■□□□□ 0.73
PDLIM2-206ENST00000409141 TNMDQ9H2S6 317 aa19.64■□□□□ 0.73
PDLIM2-206ENST00000409141 TOPORSQ9NS56 1045 aaPredicted RBP19.64■□□□□ 0.73
PDLIM2-206ENST00000409141 SEL1LQ9UBV2 794 aa19.64■□□□□ 0.73
PDLIM2-206ENST00000409141 REV3LO60673 3130 aa19.64■□□□□ 0.73
PDLIM2-206ENST00000409141 HNRNPDLO14979 420 aaKnown RBP19.63■□□□□ 0.73
PDLIM2-206ENST00000409141 LINC01565O15544 149 aa19.63■□□□□ 0.73
PDLIM2-206ENST00000409141 KCNQ1P51787 676 aa19.63■□□□□ 0.73
PDLIM2-206ENST00000409141 AMPD3Q01432 767 aa19.63■□□□□ 0.73
PDLIM2-206ENST00000409141 CTC1Q2NKJ3 1217 aa19.63■□□□□ 0.73
PDLIM2-206ENST00000409141 HERC4Q5GLZ8 1057 aaPredicted RBP19.63■□□□□ 0.73
PDLIM2-206ENST00000409141 ZNF720Q7Z2F6 126 aa19.63■□□□□ 0.73
PDLIM2-206ENST00000409141 EFHBQ8N7U6 833 aa19.63■□□□□ 0.73
PDLIM2-206ENST00000409141 MRPL43Q8N983 215 aaKnown RBP19.63■□□□□ 0.73
PDLIM2-206ENST00000409141 ST6GALNAC4Q9H4F1 302 aa19.63■□□□□ 0.73
PDLIM2-206ENST00000409141 MRPL44Q9H9J2 332 aaKnown RBP19.63■□□□□ 0.73
PDLIM2-206ENST00000409141 PANK4Q9NVE7 773 aa19.63■□□□□ 0.73
PDLIM2-206ENST00000409141 KBTBD4Q9NVX7 518 aa19.63■□□□□ 0.73
PDLIM2-206ENST00000409141 TBC1D7Q9P0N9 293 aa19.63■□□□□ 0.73
PDLIM2-206ENST00000409141 STK39Q9UEW8 545 aa19.63■□□□□ 0.73
PDLIM2-206ENST00000409141 ATG2AQ2TAZ0 1938 aa19.63■□□□□ 0.73
PDLIM2-206ENST00000409141 H3BQ06 376 aaPredicted RBP19.62■□□□□ 0.73
PDLIM2-206ENST00000409141 NUCB2P80303 420 aa19.62■□□□□ 0.73
PDLIM2-206ENST00000409141 MCL1Q07820 350 aa19.62■□□□□ 0.73
PDLIM2-206ENST00000409141 TUSC3Q13454 348 aa19.62■□□□□ 0.73
PDLIM2-206ENST00000409141 RABGGTAQ92696 567 aa19.62■□□□□ 0.73
PDLIM2-206ENST00000409141 CDCA3Q99618 268 aaPredicted RBP19.62■□□□□ 0.73
PDLIM2-206ENST00000409141 VN1R3Q9BXE9 311 aa19.62■□□□□ 0.73
PDLIM2-206ENST00000409141 SCAND2PQ9GZW5 306 aaPredicted RBP19.62■□□□□ 0.73
PDLIM2-206ENST00000409141 ZBP1Q9H171 429 aa19.62■□□□□ 0.73
PDLIM2-206ENST00000409141 MARCH5Q9NX47 278 aa19.62■□□□□ 0.73
PDLIM2-206ENST00000409141 KCNH3Q9ULD8 1083 aa19.62■□□□□ 0.73
PDLIM2-206ENST00000409141 UNC80Q8N2C7 3258 aa19.62■□□□□ 0.73
PDLIM2-206ENST00000409141 C2orf71A6NGG8 1288 aa19.61■□□□□ 0.73
PDLIM2-206ENST00000409141 PIGRP01833 764 aa19.61■□□□□ 0.73
PDLIM2-206ENST00000409141 CTSAP10619 480 aa19.61■□□□□ 0.73
PDLIM2-206ENST00000409141 LTBRP36941 435 aa19.61■□□□□ 0.73
PDLIM2-206ENST00000409141 DUSP6Q16828 381 aa19.61■□□□□ 0.73
PDLIM2-206ENST00000409141 LEXMQ3ZCV2 418 aa19.61■□□□□ 0.73
PDLIM2-206ENST00000409141 SEZ6Q53EL9 994 aa19.61■□□□□ 0.73
PDLIM2-206ENST00000409141 GLRA4Q5JXX5 417 aa19.61■□□□□ 0.73
PDLIM2-206ENST00000409141 ADALQ6DHV7 355 aa19.61■□□□□ 0.73
PDLIM2-206ENST00000409141 MAP4K3Q8IVH8 894 aa19.61■□□□□ 0.73
PDLIM2-206ENST00000409141 CCDC65Q8IXS2 484 aa19.61■□□□□ 0.73
PDLIM2-206ENST00000409141 TMEM87AQ8NBN3 555 aa19.61■□□□□ 0.73
PDLIM2-206ENST00000409141 AUTS2Q8WXX7 1259 aa19.61■□□□□ 0.73
PDLIM2-206ENST00000409141 PYM1Q9BRP8 204 aaKnown RBP19.61■□□□□ 0.73
PDLIM2-206ENST00000409141 A0A0C4DFX4 3053 aa19.61■□□□□ 0.73
PDLIM2-206ENST00000409141 SMIM28A0A1B0GU29 152 aa19.6■□□□□ 0.73
PDLIM2-206ENST00000409141 FSD2A1L4K1 749 aa19.6■□□□□ 0.73
PDLIM2-206ENST00000409141 CASTOR2A6NHX0 329 aa19.6■□□□□ 0.73
PDLIM2-206ENST00000409141 F8W810 466 aa19.6■□□□□ 0.73
PDLIM2-206ENST00000409141 BMP1P13497 986 aa19.6■□□□□ 0.73
PDLIM2-206ENST00000409141 CMA1P23946 247 aa19.6■□□□□ 0.73
PDLIM2-206ENST00000409141 NDUFV1P49821 464 aa19.6■□□□□ 0.73
PDLIM2-206ENST00000409141 NAB2Q15742 525 aa19.6■□□□□ 0.73
PDLIM2-206ENST00000409141 ALKAL1Q6UXT8 129 aa19.6■□□□□ 0.73
PDLIM2-206ENST00000409141 TRIM9Q9C026 710 aa19.6■□□□□ 0.73
PDLIM2-206ENST00000409141 HAPLN2Q9GZV7 340 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms