RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 STN1Q9H668 368 aaKnown RBP5.33□□□□□ -1.56
SCN3A-203ENST00000409101 NHEJ1Q9H9Q4 299 aaPredicted RBP5.33□□□□□ -1.56
SCN3A-203ENST00000409101 DPP3Q9NY33 737 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 SLC25A13Q9UJS0 675 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 DDX41Q9UJV9 622 aaKnown RBP5.33□□□□□ -1.56
SCN3A-203ENST00000409101 PPP2R2CQ9Y2T4 447 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 JRKLQ9Y4A0 524 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 EMSYQ7Z589 1322 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 GOLGA8QA0A0J9YX86 632 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 GOLGA8OA6NCC3 632 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 GOLGA8NF8WBI6 632 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 TTI1O43156 1089 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 SYNCRIPO60506 623 aaKnown RBP5.33□□□□□ -1.56
SCN3A-203ENST00000409101 MYL4P12829 197 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 ZFXP17010 805 aaPredicted RBP5.33□□□□□ -1.56
SCN3A-203ENST00000409101 STX2P32856 288 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 EIF4A3P38919 411 aaKnown RBP5.33□□□□□ -1.56
SCN3A-203ENST00000409101 MSH2P43246 934 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 ACADSBP45954 432 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 SLC12A1Q13621 1099 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 PREPLQ4J6C6 727 aaPredicted RBP5.33□□□□□ -1.56
SCN3A-203ENST00000409101 TTC19Q6DKK2 380 aaPredicted RBP5.33□□□□□ -1.56
SCN3A-203ENST00000409101 IQSEC1Q6DN90 963 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 CDKL3Q8IVW4 592 aaPredicted RBP5.33□□□□□ -1.56
SCN3A-203ENST00000409101 TTC13Q8NBP0 860 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 VPS39Q96JC1 886 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 PHF20Q9BVI0 1012 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 DDX56Q9NY93 547 aaKnown RBP5.33□□□□□ -1.56
SCN3A-203ENST00000409101 KIAA1210Q9ULL0 1709 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 NWD1Q149M9 1564 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 DNAJC6O75061 913 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 CHEK2O96017 543 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 TAC1P20366 129 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 SNRPFP62306 86 aaKnown RBP5.33□□□□□ -1.56
SCN3A-203ENST00000409101 RPL10AP62906 217 aaKnown RBP5.33□□□□□ -1.56
SCN3A-203ENST00000409101 PPM1LQ5SGD2 360 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 FKBP1CQ5VVH2 108 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 SPOPLQ6IQ16 392 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 ZNF280DQ6N043 979 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 PDXDC1Q6P996 788 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 METTL7BQ6UX53 244 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 TXNRD3Q86VQ6 643 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 NLGN2Q8NFZ4 835 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 TRPM4Q8TD43 1214 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 EXT2Q93063 718 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 DHX35Q9H5Z1 703 aaKnown RBP5.33□□□□□ -1.56
SCN3A-203ENST00000409101 KCNQ5Q9NR82 932 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 BAG5Q9UL15 447 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 RAB23Q9ULC3 237 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 CLCA2Q9UQC9 943 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 TRPV2Q9Y5S1 764 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 FAM205AQ6ZU69 1335 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 PP2D1A8MPX8 630 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 EIF3DO15371 548 aaKnown RBP eCLIP5.33□□□□□ -1.56
SCN3A-203ENST00000409101 GPC4O75487 556 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 HOXA10P31260 410 aaPredicted RBP5.33□□□□□ -1.56
SCN3A-203ENST00000409101 SERPINB6P35237 376 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 RFX5P48382 616 aaPredicted RBP5.33□□□□□ -1.56
SCN3A-203ENST00000409101 ATXN3P54252 364 aaPredicted RBP5.33□□□□□ -1.56
SCN3A-203ENST00000409101 LY6KQ17RY6 165 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 CES5AQ6NT32 575 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 PBKQ96KB5 322 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 DRC3Q9H069 523 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 SETD4Q9NVD3 440 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 ZNF212Q9UDV6 495 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 ANAPC7Q9UJX3 599 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 SLC13A4Q9UKG4 626 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 PCDHA13Q9Y5I0 950 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 H0Y626 953 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 HSPA6P17066 643 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 PTPRAP18433 802 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 ALDH5A1P51649 535 aaPredicted RBP5.33□□□□□ -1.56
SCN3A-203ENST00000409101 GPC5P78333 572 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 ZBED6P86452 979 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 ATP2C1P98194 919 aaPredicted RBP5.33□□□□□ -1.56
SCN3A-203ENST00000409101 KCNH2Q12809 1159 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 KIZQ2M2Z5 673 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 GOLGA7BQ2TAP0 167 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 KRT71Q3SY84 523 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 ENOX1Q8TC92 643 aaKnown RBP5.33□□□□□ -1.56
SCN3A-203ENST00000409101 ZBTB9Q96C00 473 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 L3MBTL3Q96JM7 780 aaPredicted RBP5.33□□□□□ -1.56
SCN3A-203ENST00000409101 SH2D3AQ9BRG2 576 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 CARD6Q9BX69 1037 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 FAM114A2Q9NRY5 505 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 HEY1Q9Y5J3 304 aa5.33□□□□□ -1.56
SCN3A-203ENST00000409101 POC1B-GALNT4F8VUJ3 575 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 PIK3R2O00459 728 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 KDM1AO60341 852 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 TMCC1O94876 653 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 AVPR1AP37288 418 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 APLP1P51693 650 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 CREMQ03060 361 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 YWHAHQ04917 246 aaPredicted RBP5.32□□□□□ -1.56
SCN3A-203ENST00000409101 CDH18Q13634 790 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 NCOA4Q13772 614 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 HERC6Q8IVU3 1022 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 SLC7A14Q8TBB6 771 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 ASAP3Q8TDY4 903 aa5.32□□□□□ -1.56
SCN3A-203ENST00000409101 HVCN1Q96D96 273 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms