RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 FZD8Q9H461 694 aa9.14□□□□□ -0.95
GPC3-203ENST00000406757 ST6GALNAC4Q9H4F1 302 aa9.14□□□□□ -0.95
GPC3-203ENST00000406757 EPHX3Q9H6B9 360 aa9.14□□□□□ -0.95
GPC3-203ENST00000406757 TMEM134Q9H6X4 195 aa9.14□□□□□ -0.95
GPC3-203ENST00000406757 SAMSN1Q9NSI8 373 aaKnown RBP9.14□□□□□ -0.95
GPC3-203ENST00000406757 DACH1Q9UI36 760 aa9.14□□□□□ -0.95
GPC3-203ENST00000406757 MTUS1Q9ULD2 1270 aa9.14□□□□□ -0.95
GPC3-203ENST00000406757 COG5Q9UP83 839 aa9.14□□□□□ -0.95
GPC3-203ENST00000406757 MYO9BQ13459 2157 aa9.14□□□□□ -0.95
GPC3-203ENST00000406757 EIF3DO15371 548 aaKnown RBP eCLIP9.13□□□□□ -0.95
GPC3-203ENST00000406757 CALUO43852 315 aaPredicted RBP9.13□□□□□ -0.95
GPC3-203ENST00000406757 TSPAN1O60635 241 aa9.13□□□□□ -0.95
GPC3-203ENST00000406757 NUDT7P0C024 238 aa9.13□□□□□ -0.95
GPC3-203ENST00000406757 EIF4BP23588 611 aaKnown RBP9.13□□□□□ -0.95
GPC3-203ENST00000406757 CD52P31358 61 aa9.13□□□□□ -0.95
GPC3-203ENST00000406757 PLA2G5P39877 138 aa9.13□□□□□ -0.95
GPC3-203ENST00000406757 MATR3P43243 847 aaKnown RBP eCLIP9.13□□□□□ -0.951e-6■■■■□ 21.9
GPC3-203ENST00000406757 LIG4P49917 911 aa9.13□□□□□ -0.95
GPC3-203ENST00000406757 CYP2J2P51589 502 aa9.13□□□□□ -0.95
GPC3-203ENST00000406757 NFX1Q12986 1120 aaKnown RBP9.13□□□□□ -0.95
GPC3-203ENST00000406757 PRPF4BQ13523 1007 aaKnown RBP9.13□□□□□ -0.95
GPC3-203ENST00000406757 NCAPHQ15003 741 aa9.13□□□□□ -0.95
GPC3-203ENST00000406757 MAPK6Q16659 721 aa9.13□□□□□ -0.95
GPC3-203ENST00000406757 AMHR2Q16671 573 aa9.13□□□□□ -0.95
GPC3-203ENST00000406757 TPD52L1Q16890 204 aaPredicted RBP9.13□□□□□ -0.95
GPC3-203ENST00000406757 COBLL1Q53SF7 1204 aa9.13□□□□□ -0.95
GPC3-203ENST00000406757 CENPPQ6IPU0 288 aa9.13□□□□□ -0.95
GPC3-203ENST00000406757 TTI2Q6NXR4 508 aa9.13□□□□□ -0.95
GPC3-203ENST00000406757 FAM117BQ6P1L5 589 aa9.13□□□□□ -0.95
GPC3-203ENST00000406757 CNKSR3Q6P9H4 555 aa9.13□□□□□ -0.95
GPC3-203ENST00000406757 TRAF7Q6Q0C0 670 aa9.13□□□□□ -0.95
GPC3-203ENST00000406757 STXBP4Q6ZWJ1 553 aa9.13□□□□□ -0.95
GPC3-203ENST00000406757 CATSPER4Q7RTX7 472 aa9.13□□□□□ -0.95
GPC3-203ENST00000406757 SRGAP1Q7Z6B7 1085 aa9.13□□□□□ -0.95
GPC3-203ENST00000406757 ZNF410Q86VK4 478 aa9.13□□□□□ -0.95
GPC3-203ENST00000406757 FAM228AQ86W67 206 aa9.13□□□□□ -0.95
GPC3-203ENST00000406757 MAP4K3Q8IVH8 894 aa9.13□□□□□ -0.95
GPC3-203ENST00000406757 RDH13Q8NBN7 331 aa9.13□□□□□ -0.95
GPC3-203ENST00000406757 FAM122AQ96E09 287 aa9.13□□□□□ -0.95
GPC3-203ENST00000406757 SAAL1Q96ER3 474 aa9.13□□□□□ -0.95
GPC3-203ENST00000406757 ACO2Q99798 780 aaKnown RBP9.13□□□□□ -0.95
GPC3-203ENST00000406757 TSG101Q99816 390 aa9.13□□□□□ -0.95
GPC3-203ENST00000406757 CBWD1Q9BRT8 395 aa9.13□□□□□ -0.95
GPC3-203ENST00000406757 SRRTQ9BXP5 876 aaKnown RBP9.13□□□□□ -0.95
GPC3-203ENST00000406757 HAPLN2Q9GZV7 340 aa9.13□□□□□ -0.95
GPC3-203ENST00000406757 NAT10Q9H0A0 1025 aaKnown RBP9.13□□□□□ -0.95
GPC3-203ENST00000406757 TMEM206Q9H813 350 aa9.13□□□□□ -0.95
GPC3-203ENST00000406757 AGO3Q9H9G7 860 aaKnown RBP9.13□□□□□ -0.95
GPC3-203ENST00000406757 AGPAT3Q9NRZ7 376 aa9.13□□□□□ -0.95
GPC3-203ENST00000406757 FANCLQ9NW38 375 aa9.13□□□□□ -0.95
GPC3-203ENST00000406757 ANKFY1Q9P2R3 1169 aa9.13□□□□□ -0.95
GPC3-203ENST00000406757 KCNG1Q9UIX4 513 aa9.13□□□□□ -0.95
GPC3-203ENST00000406757 RWDD2AQ9UIY3 292 aa9.13□□□□□ -0.95
GPC3-203ENST00000406757 PTPRSQ13332 1948 aa9.13□□□□□ -0.95
GPC3-203ENST00000406757 COL4A4P53420 1690 aaPredicted RBP9.13□□□□□ -0.95
GPC3-203ENST00000406757 PHLPP2Q6ZVD8 1323 aa9.12□□□□□ -0.95
GPC3-203ENST00000406757 BECN2A8MW95 431 aa9.12□□□□□ -0.95
GPC3-203ENST00000406757 H0YCG3 227 aa9.12□□□□□ -0.95
GPC3-203ENST00000406757 ACKR2O00590 384 aa9.12□□□□□ -0.95
GPC3-203ENST00000406757 HNRNPDLO14979 420 aaKnown RBP9.12□□□□□ -0.95
GPC3-203ENST00000406757 RPS6KA5O75582 802 aa9.12□□□□□ -0.95
GPC3-203ENST00000406757 ERLIN2O94905 339 aa9.12□□□□□ -0.95
GPC3-203ENST00000406757 KIF20AO95235 890 aa9.12□□□□□ -0.95
GPC3-203ENST00000406757 GJB5O95377 273 aa9.12□□□□□ -0.95
GPC3-203ENST00000406757 CXCL10P02778 98 aa9.12□□□□□ -0.95
GPC3-203ENST00000406757 NR3C1P04150 777 aa9.12□□□□□ -0.95
GPC3-203ENST00000406757 ARF4P18085 180 aaPredicted RBP9.12□□□□□ -0.95
GPC3-203ENST00000406757 ERCC5P28715 1186 aaPredicted RBP9.12□□□□□ -0.95
GPC3-203ENST00000406757 ADSSP30520 456 aa9.12□□□□□ -0.95
GPC3-203ENST00000406757 CASP4P49662 377 aa9.12□□□□□ -0.95
GPC3-203ENST00000406757 EFNA5P52803 228 aa9.12□□□□□ -0.95
GPC3-203ENST00000406757 OSTNP61366 133 aa9.12□□□□□ -0.95
GPC3-203ENST00000406757 POU5F1BQ06416 359 aa9.12□□□□□ -0.95
GPC3-203ENST00000406757 RBL2Q08999 1139 aa9.12□□□□□ -0.95
GPC3-203ENST00000406757 ADAM9Q13443 819 aa9.12□□□□□ -0.95
GPC3-203ENST00000406757 ALCAMQ13740 583 aa9.12□□□□□ -0.95
GPC3-203ENST00000406757 LPIN1Q14693 890 aa9.12□□□□□ -0.95
GPC3-203ENST00000406757 MBTPS1Q14703 1052 aa9.12□□□□□ -0.95
GPC3-203ENST00000406757 ZCWPW2Q504Y3 356 aa9.12□□□□□ -0.95
GPC3-203ENST00000406757 FBXO47Q5MNV8 452 aa9.12□□□□□ -0.95
GPC3-203ENST00000406757 ZBTB41Q5SVQ8 909 aa9.12□□□□□ -0.95
GPC3-203ENST00000406757 ATF7IP2Q5U623 682 aa9.12□□□□□ -0.95
GPC3-203ENST00000406757 SPATA1Q5VX52 437 aa9.12□□□□□ -0.95
GPC3-203ENST00000406757 CSGALNACT2Q8N6G5 542 aa9.12□□□□□ -0.95
GPC3-203ENST00000406757 ENOX1Q8TC92 643 aaKnown RBP9.12□□□□□ -0.95
GPC3-203ENST00000406757 FAM200AQ8TCP9 573 aa9.12□□□□□ -0.95
GPC3-203ENST00000406757 HVCN1Q96D96 273 aa9.12□□□□□ -0.95
GPC3-203ENST00000406757 RAD9AQ99638 391 aa9.12□□□□□ -0.95
GPC3-203ENST00000406757 TCHPQ9BT92 498 aa9.12□□□□□ -0.95
GPC3-203ENST00000406757 MRPL4Q9BYD3 311 aaKnown RBP9.12□□□□□ -0.95
GPC3-203ENST00000406757 GTPBP4Q9BZE4 634 aaKnown RBP9.12□□□□□ -0.95
GPC3-203ENST00000406757 GBP3Q9H0R5 595 aa9.12□□□□□ -0.95
GPC3-203ENST00000406757 TYW1Q9NV66 732 aaKnown RBP9.12□□□□□ -0.95
GPC3-203ENST00000406757 PRMT7Q9NVM4 692 aaPredicted RBP9.12□□□□□ -0.95
GPC3-203ENST00000406757 ST3GAL5Q9UNP4 418 aa9.12□□□□□ -0.95
GPC3-203ENST00000406757 EXOC7Q9UPT5 735 aa9.12□□□□□ -0.95
GPC3-203ENST00000406757 NFE2L3Q9Y4A8 694 aa9.12□□□□□ -0.95
GPC3-203ENST00000406757 PRRC2BQ5JSZ5 2229 aaKnown RBP9.12□□□□□ -0.95
GPC3-203ENST00000406757 TET1Q8NFU7 2136 aa9.11□□□□□ -0.95
GPC3-203ENST00000406757 UBE4BO95155 1302 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms