RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 NBPF7P0C2Y1 421 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P13-201ENST00000406019 C5AR1P21730 350 aa6.25□□□□□ -1.41
HMGB1P13-201ENST00000406019 NEK3P51956 506 aa6.25□□□□□ -1.41
HMGB1P13-201ENST00000406019 SRSF2Q01130 221 aaKnown RBP6.25□□□□□ -1.41
HMGB1P13-201ENST00000406019 PPARAQ07869 468 aa6.25□□□□□ -1.41
HMGB1P13-201ENST00000406019 PICALMQ13492 652 aa6.25□□□□□ -1.41
HMGB1P13-201ENST00000406019 SAFBQ15424 915 aaKnown RBP eCLIP6.25□□□□□ -1.41
HMGB1P13-201ENST00000406019 COBLL1Q53SF7 1204 aa6.25□□□□□ -1.41
HMGB1P13-201ENST00000406019 IFIT1BQ5T764 474 aaKnown RBP6.25□□□□□ -1.41
HMGB1P13-201ENST00000406019 CCDC62Q6P9F0 684 aa6.25□□□□□ -1.41
HMGB1P13-201ENST00000406019 SPICE1Q8N0Z3 855 aa6.25□□□□□ -1.41
HMGB1P13-201ENST00000406019 TMEM176AQ96HP8 235 aa6.25□□□□□ -1.41
HMGB1P13-201ENST00000406019 STRBPQ96SI9 672 aaKnown RBP6.25□□□□□ -1.41
HMGB1P13-201ENST00000406019 CSRNP2Q9H175 543 aa6.25□□□□□ -1.41
HMGB1P13-201ENST00000406019 KCTD10Q9H3F6 313 aa6.25□□□□□ -1.41
HMGB1P13-201ENST00000406019 ING3Q9NXR8 418 aa6.25□□□□□ -1.41
HMGB1P13-201ENST00000406019 SAP30BPQ9UHR5 308 aaKnown RBP6.25□□□□□ -1.41
HMGB1P13-201ENST00000406019 SYNPO2Q9UMS6 1093 aa6.25□□□□□ -1.41
HMGB1P13-201ENST00000406019 USP18Q9UMW8 372 aa6.25□□□□□ -1.41
HMGB1P13-201ENST00000406019 DNM3Q9UQ16 869 aa6.25□□□□□ -1.41
HMGB1P13-201ENST00000406019 CDY2AQ9Y6F7 541 aa6.25□□□□□ -1.41
HMGB1P13-201ENST00000406019 EIF5BO60841 1220 aaKnown RBP6.24□□□□□ -1.41
HMGB1P13-201ENST00000406019 OFD1O75665 1012 aa6.24□□□□□ -1.41
HMGB1P13-201ENST00000406019 POU2F2P09086 479 aa6.24□□□□□ -1.41
HMGB1P13-201ENST00000406019 IFIT2P09913 472 aaKnown RBP6.24□□□□□ -1.41
HMGB1P13-201ENST00000406019 ZNF280AP59817 542 aaPredicted RBP6.24□□□□□ -1.41
HMGB1P13-201ENST00000406019 DHX8Q14562 1220 aaKnown RBP6.24□□□□□ -1.41
HMGB1P13-201ENST00000406019 ZNF267Q14586 743 aaPredicted RBP6.24□□□□□ -1.41
HMGB1P13-201ENST00000406019 PUM1Q14671 1186 aaKnown RBP eCLIP6.24□□□□□ -1.41
HMGB1P13-201ENST00000406019 PRKD1Q15139 912 aaPredicted RBP6.24□□□□□ -1.41
HMGB1P13-201ENST00000406019 HS1BP3Q53T59 392 aa6.24□□□□□ -1.41
HMGB1P13-201ENST00000406019 CT83Q5H943 113 aa6.24□□□□□ -1.41
HMGB1P13-201ENST00000406019 TOR2AQ5JU69 321 aa6.24□□□□□ -1.41
HMGB1P13-201ENST00000406019 C1QL3Q5VWW1 255 aa6.24□□□□□ -1.41
HMGB1P13-201ENST00000406019 RNF207Q6ZRF8 634 aa6.24□□□□□ -1.41
HMGB1P13-201ENST00000406019 TAS1R1Q7RTX1 841 aa6.24□□□□□ -1.41
HMGB1P13-201ENST00000406019 Q8N1X5 172 aa6.24□□□□□ -1.41
HMGB1P13-201ENST00000406019 LILRA3Q8N6C8 439 aaPredicted RBP6.24□□□□□ -1.41
HMGB1P13-201ENST00000406019 SH3RF3Q8TEJ3 882 aaPredicted RBP6.24□□□□□ -1.41
HMGB1P13-201ENST00000406019 HPS3Q969F9 1004 aa6.24□□□□□ -1.41
HMGB1P13-201ENST00000406019 BORCS6Q96GS4 357 aa6.24□□□□□ -1.41
HMGB1P13-201ENST00000406019 MPHOSPH9Q99550 1183 aa6.24□□□□□ -1.41
HMGB1P13-201ENST00000406019 TLR9Q9NR96 1032 aa6.24□□□□□ -1.41
HMGB1P13-201ENST00000406019 TUBD1Q9UJT1 453 aa6.24□□□□□ -1.41
HMGB1P13-201ENST00000406019 KRTAP23-1A1A580 65 aa6.23□□□□□ -1.41
HMGB1P13-201ENST00000406019 A6NNZ2 444 aa6.23□□□□□ -1.41
HMGB1P13-201ENST00000406019 CTNND1O60716 968 aaKnown RBP6.23□□□□□ -1.41
HMGB1P13-201ENST00000406019 ALDH1A2O94788 518 aa6.23□□□□□ -1.41
HMGB1P13-201ENST00000406019 HRGP04196 525 aa6.23□□□□□ -1.41
HMGB1P13-201ENST00000406019 LPLP06858 475 aa6.23□□□□□ -1.41
HMGB1P13-201ENST00000406019 ACRV1P26436 265 aa6.23□□□□□ -1.41
HMGB1P13-201ENST00000406019 MRPS9P82933 396 aaKnown RBP6.23□□□□□ -1.41
HMGB1P13-201ENST00000406019 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.23□□□□□ -1.41
HMGB1P13-201ENST00000406019 C10orf62Q5T681 223 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P13-201ENST00000406019 CRIP3Q6Q6R5 217 aa6.23□□□□□ -1.41
HMGB1P13-201ENST00000406019 FAM111BQ6SJ93 734 aa6.23□□□□□ -1.41
HMGB1P13-201ENST00000406019 HTR3DQ70Z44 454 aa6.23□□□□□ -1.41
HMGB1P13-201ENST00000406019 C11orf96Q7Z7L8 435 aa6.23□□□□□ -1.41
HMGB1P13-201ENST00000406019 CMTM4Q8IZR5 234 aa6.23□□□□□ -1.41
HMGB1P13-201ENST00000406019 OR14C36Q8NHC7 312 aa6.23□□□□□ -1.41
HMGB1P13-201ENST00000406019 IL17DQ8TAD2 202 aa6.23□□□□□ -1.41
HMGB1P13-201ENST00000406019 TSPEARQ8WU66 669 aa6.23□□□□□ -1.41
HMGB1P13-201ENST00000406019 EAF2Q96CJ1 260 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P13-201ENST00000406019 FAM89AQ96GI7 184 aa6.23□□□□□ -1.41
HMGB1P13-201ENST00000406019 ZNF747Q9BV97 191 aa6.23□□□□□ -1.41
HMGB1P13-201ENST00000406019 GTPBP4Q9BZE4 634 aaKnown RBP6.23□□□□□ -1.41
HMGB1P13-201ENST00000406019 TAGLN3Q9UI15 199 aa6.23□□□□□ -1.41
HMGB1P13-201ENST00000406019 KCNG1Q9UIX4 513 aa6.23□□□□□ -1.41
HMGB1P13-201ENST00000406019 DAPK3O43293 454 aa6.22□□□□□ -1.41
HMGB1P13-201ENST00000406019 NRP2O60462 931 aa6.22□□□□□ -1.41
HMGB1P13-201ENST00000406019 NDUFS2O75306 463 aa6.22□□□□□ -1.41
HMGB1P13-201ENST00000406019 STC2O76061 302 aa6.22□□□□□ -1.41
HMGB1P13-201ENST00000406019 OSMP13725 252 aa6.22□□□□□ -1.41
HMGB1P13-201ENST00000406019 RHCEP18577 417 aa6.22□□□□□ -1.41
HMGB1P13-201ENST00000406019 RHDQ02161 417 aa6.22□□□□□ -1.41
HMGB1P13-201ENST00000406019 SPIDRQ14159 915 aa6.22□□□□□ -1.41
HMGB1P13-201ENST00000406019 UGT8Q16880 541 aa6.22□□□□□ -1.41
HMGB1P13-201ENST00000406019 SRGAP1Q7Z6B7 1085 aa6.22□□□□□ -1.41
HMGB1P13-201ENST00000406019 MIER2Q8N344 545 aa6.22□□□□□ -1.41
HMGB1P13-201ENST00000406019 D2HGDHQ8N465 521 aa6.22□□□□□ -1.41
HMGB1P13-201ENST00000406019 PRR18Q8N4B5 295 aa6.22□□□□□ -1.41
HMGB1P13-201ENST00000406019 DIS3LQ8TF46 1054 aaKnown RBP6.22□□□□□ -1.41
HMGB1P13-201ENST00000406019 EXTL1Q92935 676 aa6.22□□□□□ -1.41
HMGB1P13-201ENST00000406019 RAX2Q96IS3 184 aa6.22□□□□□ -1.41
HMGB1P13-201ENST00000406019 FAM193BQ96PV7 902 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P13-201ENST00000406019 UIMC1Q96RL1 719 aa6.22□□□□□ -1.41
HMGB1P13-201ENST00000406019 QRSL1Q9H0R6 528 aaKnown RBP6.22□□□□□ -1.41
HMGB1P13-201ENST00000406019 SERPINB13Q9UIV8 391 aa6.22□□□□□ -1.41
HMGB1P13-201ENST00000406019 TPP1O14773 563 aa6.21□□□□□ -1.42
HMGB1P13-201ENST00000406019 ZBED1O96006 694 aa6.21□□□□□ -1.42
HMGB1P13-201ENST00000406019 MTHFD2P13995 350 aa6.21□□□□□ -1.42
HMGB1P13-201ENST00000406019 RABGGTBP53611 331 aa6.21□□□□□ -1.42
HMGB1P13-201ENST00000406019 LGALS4P56470 323 aa6.21□□□□□ -1.42
HMGB1P13-201ENST00000406019 MGAT5Q09328 741 aa6.21□□□□□ -1.42
HMGB1P13-201ENST00000406019 MIIPQ5JXC2 388 aa6.21□□□□□ -1.42
HMGB1P13-201ENST00000406019 CATIPQ7Z7H3 387 aa6.21□□□□□ -1.42
HMGB1P13-201ENST00000406019 MORC1Q86VD1 984 aa6.21□□□□□ -1.42
HMGB1P13-201ENST00000406019 GJA10Q969M2 543 aa6.21□□□□□ -1.42
HMGB1P13-201ENST00000406019 EVI5LQ96CN4 794 aa6.21□□□□□ -1.42
HMGB1P13-201ENST00000406019 ZNF503Q96F45 646 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms