RNA–Protein interactions for RNA: ENST00000405636.6

TOMM40-202, Transcript of translocase of outer mitochondrial membrane 40, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TOMM40, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40-202ENST00000405636 CCDC127Q96BQ5 260 aa28.4■■■□□ 2.14
TOMM40-202ENST00000405636 IFIH1Q9BYX4 1025 aaKnown RBP28.4■■■□□ 2.14
TOMM40-202ENST00000405636 NXF3Q9H4D5 531 aaKnown RBP28.4■■■□□ 2.14
TOMM40-202ENST00000405636 IBSPP21815 317 aaPredicted RBP28.39■■■□□ 2.14
TOMM40-202ENST00000405636 ITGB8P26012 769 aa28.39■■■□□ 2.14
TOMM40-202ENST00000405636 UBASH3AP57075 661 aa28.39■■■□□ 2.14
TOMM40-202ENST00000405636 APOL6Q9BWW8 343 aa28.39■■■□□ 2.14
TOMM40-202ENST00000405636 RBAKQ9NYW8 714 aaPredicted RBP28.39■■■□□ 2.14
TOMM40-202ENST00000405636 CPSF3Q9UKF6 684 aaKnown RBP28.39■■■□□ 2.14
TOMM40-202ENST00000405636 ZNF233A6NK53 670 aa28.38■■■□□ 2.13
TOMM40-202ENST00000405636 KIAA0391O15091 583 aaKnown RBP28.38■■■□□ 2.13
TOMM40-202ENST00000405636 MEFVO15553 781 aaPredicted RBP28.38■■■□□ 2.13
TOMM40-202ENST00000405636 STAG3L1P0CL83 205 aa28.38■■■□□ 2.13
TOMM40-202ENST00000405636 BFSP1Q12934 665 aa28.38■■■□□ 2.13
TOMM40-202ENST00000405636 TCTN1Q2MV58 587 aa28.38■■■□□ 2.13
TOMM40-202ENST00000405636 DCAF4L1Q3SXM0 396 aa28.38■■■□□ 2.13
TOMM40-202ENST00000405636 USP38Q8NB14 1042 aa28.38■■■□□ 2.13
TOMM40-202ENST00000405636 MFSD14AQ96MC6 490 aa28.38■■■□□ 2.13
TOMM40-202ENST00000405636 POP1Q99575 1024 aaKnown RBP28.38■■■□□ 2.13
TOMM40-202ENST00000405636 MMRN2Q9H8L6 949 aa28.38■■■□□ 2.13
TOMM40-202ENST00000405636 TOPORSQ9NS56 1045 aaPredicted RBP28.38■■■□□ 2.13
TOMM40-202ENST00000405636 SQORQ9Y6N5 450 aa28.38■■■□□ 2.13
TOMM40-202ENST00000405636 ANK1P16157 1881 aa28.38■■■□□ 2.13
TOMM40-202ENST00000405636 TEX33O43247 280 aa28.38■■■□□ 2.13
TOMM40-202ENST00000405636 LDHAP00338 332 aaKnown RBP28.38■■■□□ 2.13
TOMM40-202ENST00000405636 CXCL8P10145 99 aa28.38■■■□□ 2.13
TOMM40-202ENST00000405636 ENOX2Q16206 610 aaKnown RBP28.38■■■□□ 2.13
TOMM40-202ENST00000405636 MAN2A1Q16706 1144 aa28.38■■■□□ 2.13
TOMM40-202ENST00000405636 C1orf220Q5T0J3 134 aa28.38■■■□□ 2.13
TOMM40-202ENST00000405636 SLC35C1Q96A29 364 aa28.38■■■□□ 2.13
TOMM40-202ENST00000405636 FAM212AQ96EL1 285 aa28.38■■■□□ 2.13
TOMM40-202ENST00000405636 TRIM6Q9C030 488 aaPredicted RBP28.38■■■□□ 2.13
TOMM40-202ENST00000405636 METTL14Q9HCE5 456 aaKnown RBP28.38■■■□□ 2.13
TOMM40-202ENST00000405636 PDE11AQ9HCR9 933 aa28.38■■■□□ 2.13
TOMM40-202ENST00000405636 UTP18Q9Y5J1 556 aaKnown RBP eCLIP28.38■■■□□ 2.13
TOMM40-202ENST00000405636 A0A1B0GTH6 734 aa28.37■■■□□ 2.13
TOMM40-202ENST00000405636 LRRC10BA6NIK2 292 aa28.37■■■□□ 2.13
TOMM40-202ENST00000405636 ADCY5O95622 1261 aa28.37■■■□□ 2.13
TOMM40-202ENST00000405636 KRT13P13646 458 aa28.37■■■□□ 2.13
TOMM40-202ENST00000405636 VAMP7P51809 220 aa28.37■■■□□ 2.13
TOMM40-202ENST00000405636 ZNF75DP51815 510 aa28.37■■■□□ 2.13
TOMM40-202ENST00000405636 DSC3Q14574 896 aa28.37■■■□□ 2.13
TOMM40-202ENST00000405636 LMBRD2Q68DH5 695 aaPredicted RBP28.37■■■□□ 2.13
TOMM40-202ENST00000405636 KIAA1586Q9HCI6 787 aa28.37■■■□□ 2.13
TOMM40-202ENST00000405636 SNTG2Q9NY99 539 aa28.37■■■□□ 2.13
TOMM40-202ENST00000405636 MAPK13O15264 365 aa28.36■■■□□ 2.13
TOMM40-202ENST00000405636 DLATP10515 647 aaKnown RBP28.36■■■□□ 2.13
TOMM40-202ENST00000405636 VWA3BQ502W6 1294 aa28.36■■■□□ 2.13
TOMM40-202ENST00000405636 INTS8Q75QN2 995 aaKnown RBP28.36■■■□□ 2.13
TOMM40-202ENST00000405636 DEFB128Q7Z7B8 93 aa28.36■■■□□ 2.13
TOMM40-202ENST00000405636 ADAM2Q99965 735 aa28.36■■■□□ 2.13
TOMM40-202ENST00000405636 CXCL16Q9H2A7 254 aa28.36■■■□□ 2.13
TOMM40-202ENST00000405636 RNF39Q9H2S5 420 aa28.36■■■□□ 2.13
TOMM40-202ENST00000405636 CCDC85CA6NKD9 419 aa28.35■■■□□ 2.13
TOMM40-202ENST00000405636 BRSK2Q8IWQ3 736 aa28.35■■■□□ 2.13
TOMM40-202ENST00000405636 SMG8Q8ND04 991 aaKnown RBP28.35■■■□□ 2.13
TOMM40-202ENST00000405636 LINC01599Q8WXQ3 324 aa28.35■■■□□ 2.13
TOMM40-202ENST00000405636 CCDC51Q96ER9 411 aa28.35■■■□□ 2.13
TOMM40-202ENST00000405636 RTN4Q9NQC3 1192 aaKnown RBP28.35■■■□□ 2.13
TOMM40-202ENST00000405636 IPPQ9Y573 584 aa28.35■■■□□ 2.13
TOMM40-202ENST00000405636 CITO14578 2027 aa28.35■■■□□ 2.13
TOMM40-202ENST00000405636 PTPRJQ12913 1337 aa28.35■■■□□ 2.13
TOMM40-202ENST00000405636 TRIP11Q15643 1979 aa28.35■■■□□ 2.13
TOMM40-202ENST00000405636 LRRIQ3A6PVS8 624 aaPredicted RBP28.35■■■□□ 2.13
TOMM40-202ENST00000405636 ZSCAN20P17040 1043 aaPredicted RBP28.35■■■□□ 2.13
TOMM40-202ENST00000405636 AKAP5P24588 427 aa28.35■■■□□ 2.13
TOMM40-202ENST00000405636 GRM5P41594 1212 aa28.35■■■□□ 2.13
TOMM40-202ENST00000405636 DBF4BQ8NFT6 615 aa28.35■■■□□ 2.13
TOMM40-202ENST00000405636 PARD3BQ8TEW8 1205 aa28.35■■■□□ 2.13
TOMM40-202ENST00000405636 NDST4Q9H3R1 872 aa28.35■■■□□ 2.13
TOMM40-202ENST00000405636 CHST12Q9NRB3 414 aa28.35■■■□□ 2.13
TOMM40-202ENST00000405636 RNF19AQ9NV58 838 aa28.35■■■□□ 2.13
TOMM40-202ENST00000405636 PCDHB2Q9Y5E7 798 aa28.35■■■□□ 2.13
TOMM40-202ENST00000405636 LGALS16A8MUM7 142 aa28.34■■■□□ 2.13
TOMM40-202ENST00000405636 CLTAP09496 248 aa28.34■■■□□ 2.13
TOMM40-202ENST00000405636 KCNH2Q12809 1159 aa28.34■■■□□ 2.13
TOMM40-202ENST00000405636 PSMD6Q15008 389 aa28.34■■■□□ 2.13
TOMM40-202ENST00000405636 RTN4RL1Q86UN2 441 aaPredicted RBP28.34■■■□□ 2.13
TOMM40-202ENST00000405636 FAM105AQ9NUU6 356 aa28.34■■■□□ 2.13
TOMM40-202ENST00000405636 MEIS3P2A8K0S8 358 aa28.33■■■□□ 2.13
TOMM40-202ENST00000405636 KIAA0355O15063 1070 aa28.33■■■□□ 2.13
TOMM40-202ENST00000405636 PPP3CAQ08209 521 aa28.33■■■□□ 2.13
TOMM40-202ENST00000405636 NR1I3Q14994 352 aa28.33■■■□□ 2.13
TOMM40-202ENST00000405636 PLEKHG4Q58EX7 1191 aa28.33■■■□□ 2.13
TOMM40-202ENST00000405636 APBB1IPQ7Z5R6 666 aaPredicted RBP28.33■■■□□ 2.13
TOMM40-202ENST00000405636 RPF1Q9H9Y2 349 aaKnown RBP28.33■■■□□ 2.13
TOMM40-202ENST00000405636 TPM2P07951 284 aa28.32■■■□□ 2.12
TOMM40-202ENST00000405636 GCLMP48507 274 aa28.32■■■□□ 2.12
TOMM40-202ENST00000405636 UBXN1Q04323 297 aa28.32■■■□□ 2.12
TOMM40-202ENST00000405636 SLC10A6Q3KNW5 377 aa28.32■■■□□ 2.12
TOMM40-202ENST00000405636 FILIP1LQ4L180 1135 aa28.32■■■□□ 2.12
TOMM40-202ENST00000405636 TMEM130Q8N3G9 435 aa28.32■■■□□ 2.12
TOMM40-202ENST00000405636 LPPQ93052 612 aa28.32■■■□□ 2.12
TOMM40-202ENST00000405636 VWCEQ96DN2 955 aa28.32■■■□□ 2.12
TOMM40-202ENST00000405636 ACAP3Q96P50 834 aa28.32■■■□□ 2.12
TOMM40-202ENST00000405636 CCDC94Q9BW85 323 aaPredicted RBP28.32■■■□□ 2.12
TOMM40-202ENST00000405636 LACTBL1A8MY62 500 aa28.32■■■□□ 2.12
TOMM40-202ENST00000405636 RECQL4O94761 1208 aa28.32■■■□□ 2.12
TOMM40-202ENST00000405636 TIMP1P01033 207 aa28.32■■■□□ 2.12
TOMM40-202ENST00000405636 AFPP02771 609 aaKnown RBP28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms