RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 SGPL1O95470 568 aa16.1■□□□□ 0.17
ATG4B-206ENST00000405546 YWHABP31946 246 aaKnown RBP16.1■□□□□ 0.17
ATG4B-206ENST00000405546 SSTR3P32745 418 aaPredicted RBP16.1■□□□□ 0.17
ATG4B-206ENST00000405546 C2CD6Q53TS8 623 aa16.1■□□□□ 0.17
ATG4B-206ENST00000405546 LMBRD2Q68DH5 695 aaPredicted RBP16.1■□□□□ 0.17
ATG4B-206ENST00000405546 STYK1Q6J9G0 422 aa16.1■□□□□ 0.17
ATG4B-206ENST00000405546 ZC3H3Q8IXZ2 948 aaKnown RBP16.1■□□□□ 0.17
ATG4B-206ENST00000405546 RUBCNQ92622 972 aa16.1■□□□□ 0.17
ATG4B-206ENST00000405546 PDGFDQ9GZP0 370 aaPredicted RBP16.1■□□□□ 0.17
ATG4B-206ENST00000405546 KDM4CQ9H3R0 1056 aa16.1■□□□□ 0.17
ATG4B-206ENST00000405546 SEMA4AQ9H3S1 761 aa16.1■□□□□ 0.17
ATG4B-206ENST00000405546 PIDD1Q9HB75 910 aa16.1■□□□□ 0.17
ATG4B-206ENST00000405546 CAP2P40123 477 aa16.09■□□□□ 0.17
ATG4B-206ENST00000405546 ARHGEF16Q5VV41 709 aa16.09■□□□□ 0.17
ATG4B-206ENST00000405546 NUGGCQ68CJ6 796 aa16.09■□□□□ 0.17
ATG4B-206ENST00000405546 INTS8Q75QN2 995 aaKnown RBP16.09■□□□□ 0.17
ATG4B-206ENST00000405546 FAM160B2Q86V87 743 aa16.09■□□□□ 0.17
ATG4B-206ENST00000405546 CBWD2Q8IUF1 395 aa16.09■□□□□ 0.17
ATG4B-206ENST00000405546 UBL4BQ8N7F7 174 aa16.09■□□□□ 0.17
ATG4B-206ENST00000405546 RMDN3Q96TC7 470 aa16.09■□□□□ 0.17
ATG4B-206ENST00000405546 FEM1BQ9UK73 627 aa16.09■□□□□ 0.17
ATG4B-206ENST00000405546 ZMYND8Q9ULU4 1186 aaPredicted RBP16.09■□□□□ 0.17
ATG4B-206ENST00000405546 TCP11X1B4DZS4 312 aa16.09■□□□□ 0.17
ATG4B-206ENST00000405546 ASNSP08243 561 aa16.09■□□□□ 0.17
ATG4B-206ENST00000405546 TMEM253P0C7T8 217 aa16.09■□□□□ 0.17
ATG4B-206ENST00000405546 NQO1P15559 274 aaKnown RBP16.09■□□□□ 0.17
ATG4B-206ENST00000405546 KCNJ1P48048 391 aa16.09■□□□□ 0.17
ATG4B-206ENST00000405546 MARCKSL1P49006 195 aa16.09■□□□□ 0.17
ATG4B-206ENST00000405546 GRIK3Q13003 919 aa16.09■□□□□ 0.17
ATG4B-206ENST00000405546 DPY19L2P1Q6NXN4 242 aa16.09■□□□□ 0.17
ATG4B-206ENST00000405546 LRIG3Q6UXM1 1119 aa16.09■□□□□ 0.17
ATG4B-206ENST00000405546 DAW1Q8N136 415 aa16.09■□□□□ 0.17
ATG4B-206ENST00000405546 FBXO25Q8TCJ0 367 aa16.09■□□□□ 0.17
ATG4B-206ENST00000405546 POMGNT1Q8WZA1 660 aa16.09■□□□□ 0.17
ATG4B-206ENST00000405546 KRT35Q92764 455 aa16.09■□□□□ 0.17
ATG4B-206ENST00000405546 GTPBP10A4D1E9 387 aaKnown RBP16.09■□□□□ 0.17
ATG4B-206ENST00000405546 ANKRD62A6NC57 917 aa16.09■□□□□ 0.17
ATG4B-206ENST00000405546 VPS41P49754 854 aa16.09■□□□□ 0.17
ATG4B-206ENST00000405546 EN1Q05925 392 aaPredicted RBP16.09■□□□□ 0.17
ATG4B-206ENST00000405546 LACTB2Q53H82 288 aaPredicted RBP16.09■□□□□ 0.17
ATG4B-206ENST00000405546 PRAMEF18Q5VWM3 479 aa16.09■□□□□ 0.17
ATG4B-206ENST00000405546 TTLL6Q8N841 843 aa16.09■□□□□ 0.17
ATG4B-206ENST00000405546 PI4K2AQ9BTU6 479 aa16.09■□□□□ 0.17
ATG4B-206ENST00000405546 MKNK1Q9BUB5 465 aa16.09■□□□□ 0.17
ATG4B-206ENST00000405546 OSBPL1AQ9BXW6 950 aa16.09■□□□□ 0.17
ATG4B-206ENST00000405546 TMEM206Q9H813 350 aa16.09■□□□□ 0.17
ATG4B-206ENST00000405546 ERVK-5Q9HDB9 667 aa16.09■□□□□ 0.17
ATG4B-206ENST00000405546 TOPORSQ9NS56 1045 aaPredicted RBP16.09■□□□□ 0.17
ATG4B-206ENST00000405546 IRAK4Q9NWZ3 460 aa16.09■□□□□ 0.17
ATG4B-206ENST00000405546 TBK1Q9UHD2 729 aa16.09■□□□□ 0.17
ATG4B-206ENST00000405546 FRMPD4Q14CM0 1322 aa16.09■□□□□ 0.17
ATG4B-206ENST00000405546 HARSP12081 509 aaKnown RBP16.08■□□□□ 0.17
ATG4B-206ENST00000405546 ABL2P42684 1182 aa16.08■□□□□ 0.17
ATG4B-206ENST00000405546 NCALDP61601 193 aa16.08■□□□□ 0.17
ATG4B-206ENST00000405546 RPS6P62753 249 aaKnown RBP16.08■□□□□ 0.17
ATG4B-206ENST00000405546 PRKG1Q13976 671 aa16.08■□□□□ 0.17
ATG4B-206ENST00000405546 C18orf8Q96DM3 657 aa16.08■□□□□ 0.17
ATG4B-206ENST00000405546 RANBP17Q9H2T7 1088 aaKnown RBP16.08■□□□□ 0.17
ATG4B-206ENST00000405546 FZD1Q9UP38 647 aa16.08■□□□□ 0.17
ATG4B-206ENST00000405546 COG5Q9UP83 839 aa16.08■□□□□ 0.17
ATG4B-206ENST00000405546 NHSQ6T4R5 1651 aa16.08■□□□□ 0.16
ATG4B-206ENST00000405546 ATP9AO75110 1047 aa16.08■□□□□ 0.16
ATG4B-206ENST00000405546 RARRES1P49788 294 aa16.08■□□□□ 0.16
ATG4B-206ENST00000405546 RASA3Q14644 834 aa16.08■□□□□ 0.16
ATG4B-206ENST00000405546 TKFCQ3LXA3 575 aa16.08■□□□□ 0.16
ATG4B-206ENST00000405546 DENND2CQ68D51 928 aa16.08■□□□□ 0.16
ATG4B-206ENST00000405546 SLC47A2Q86VL8 602 aa16.08■□□□□ 0.16
ATG4B-206ENST00000405546 ALG3Q92685 438 aa16.08■□□□□ 0.16
ATG4B-206ENST00000405546 RNF25Q96BH1 459 aaPredicted RBP16.08■□□□□ 0.16
ATG4B-206ENST00000405546 ZNF653Q96CK0 615 aa16.08■□□□□ 0.16
ATG4B-206ENST00000405546 RAB17Q9H0T7 212 aa16.08■□□□□ 0.16
ATG4B-206ENST00000405546 G3BP2Q9UN86 482 aaKnown RBP16.08■□□□□ 0.16
ATG4B-206ENST00000405546 C5orf60A6NFR6 353 aa16.07■□□□□ 0.16
ATG4B-206ENST00000405546 CALRP27797 417 aaKnown RBP16.07■□□□□ 0.16
ATG4B-206ENST00000405546 PCK1P35558 622 aa16.07■□□□□ 0.16
ATG4B-206ENST00000405546 LONRF1Q17RB8 773 aa16.07■□□□□ 0.16
ATG4B-206ENST00000405546 ANKRD20A2Q5SQ80 823 aa16.07■□□□□ 0.16
ATG4B-206ENST00000405546 SEL1L2Q5TEA6 688 aa16.07■□□□□ 0.16
ATG4B-206ENST00000405546 ANKRD20A1Q5TYW2 823 aa16.07■□□□□ 0.16
ATG4B-206ENST00000405546 ANKRD20A3Q5VUR7 823 aa16.07■□□□□ 0.16
ATG4B-206ENST00000405546 CPNE8Q86YQ8 564 aa16.07■□□□□ 0.16
ATG4B-206ENST00000405546 NIM1KQ8IY84 436 aa16.07■□□□□ 0.16
ATG4B-206ENST00000405546 BORCS6Q96GS4 357 aa16.07■□□□□ 0.16
ATG4B-206ENST00000405546 CEP170P1Q96L14 293 aa16.07■□□□□ 0.16
ATG4B-206ENST00000405546 ZNF317Q96PQ6 595 aaPredicted RBP16.07■□□□□ 0.16
ATG4B-206ENST00000405546 NAP1L3Q99457 506 aaPredicted RBP16.07■□□□□ 0.16
ATG4B-206ENST00000405546 COMTP21964 271 aa16.07■□□□□ 0.16
ATG4B-206ENST00000405546 TUBP50607 506 aa16.07■□□□□ 0.16
ATG4B-206ENST00000405546 GPC5P78333 572 aa16.07■□□□□ 0.16
ATG4B-206ENST00000405546 MIS18BP1Q6P0N0 1132 aa16.07■□□□□ 0.16
ATG4B-206ENST00000405546 LONP2Q86WA8 852 aa16.07■□□□□ 0.16
ATG4B-206ENST00000405546 DHX38Q92620 1227 aaKnown RBP16.07■□□□□ 0.16
ATG4B-206ENST00000405546 FIZ1Q96SL8 496 aa16.07■□□□□ 0.16
ATG4B-206ENST00000405546 EBF2Q9HAK2 575 aa16.07■□□□□ 0.16
ATG4B-206ENST00000405546 CTNNAL1Q9UBT7 734 aa16.07■□□□□ 0.16
ATG4B-206ENST00000405546 TAF1LQ8IZX4 1826 aa16.07■□□□□ 0.16
ATG4B-206ENST00000405546 DENND3A2RUS2 1198 aa16.07■□□□□ 0.16
ATG4B-206ENST00000405546 SPDYE5A6NIY4 337 aa16.07■□□□□ 0.16
ATG4B-206ENST00000405546 HNRNPDLO14979 420 aaKnown RBP16.07■□□□□ 0.16
ATG4B-206ENST00000405546 SMIM24O75264 130 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms