RNA–Protein interactions for RNA: ENST00000405240.5

RTN4-209, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,061 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-209ENST00000405240 ENOSF1Q7L5Y1 443 aa4.15□□□□□ -1.74
RTN4-209ENST00000405240 ZNF677Q86XU0 584 aa4.15□□□□□ -1.74
RTN4-209ENST00000405240 GLG1Q92896 1179 aa4.15□□□□□ -1.74
RTN4-209ENST00000405240 KAT5Q92993 513 aa4.15□□□□□ -1.74
RTN4-209ENST00000405240 SEC16BQ96JE7 1060 aa4.15□□□□□ -1.74
RTN4-209ENST00000405240 FAM81BQ96LP2 452 aa4.15□□□□□ -1.74
RTN4-209ENST00000405240 XPO6Q96QU8 1125 aaKnown RBP4.15□□□□□ -1.74
RTN4-209ENST00000405240 TMX4Q9H1E5 349 aaPredicted RBP4.15□□□□□ -1.74
RTN4-209ENST00000405240 ACTR5Q9H9F9 607 aaPredicted RBP4.15□□□□□ -1.74
RTN4-209ENST00000405240 MROH7Q68CQ1 1323 aa4.15□□□□□ -1.74
RTN4-209ENST00000405240 GOLGA6L10A0A0M3HER8 536 aa4.15□□□□□ -1.75
RTN4-209ENST00000405240 TCRBV7S2A1N4TA0A589 114 aa4.15□□□□□ -1.75
RTN4-209ENST00000405240 TMCO5BA8MYB1 307 aa4.15□□□□□ -1.75
RTN4-209ENST00000405240 ANKRD65E5RJM6 399 aa4.15□□□□□ -1.75
RTN4-209ENST00000405240 G3V3G9 751 aa4.15□□□□□ -1.75
RTN4-209ENST00000405240 NFIBO00712 420 aa4.15□□□□□ -1.75
RTN4-209ENST00000405240 CHMP2AO43633 222 aa4.15□□□□□ -1.75
RTN4-209ENST00000405240 MMEP08473 750 aa4.15□□□□□ -1.75
RTN4-209ENST00000405240 ACO1P21399 889 aaKnown RBP4.15□□□□□ -1.75
RTN4-209ENST00000405240 RBM5P52756 815 aaKnown RBP eCLIP4.15□□□□□ -1.75
RTN4-209ENST00000405240 MFAP3P55082 362 aa4.15□□□□□ -1.75
RTN4-209ENST00000405240 MAGOHP61326 146 aaKnown RBP4.15□□□□□ -1.75
RTN4-209ENST00000405240 CYP24A1Q07973 514 aa4.15□□□□□ -1.75
RTN4-209ENST00000405240 XRCC4Q13426 336 aa4.15□□□□□ -1.75
RTN4-209ENST00000405240 AUHQ13825 339 aaKnown RBP4.15□□□□□ -1.75
RTN4-209ENST00000405240 PTK6Q13882 451 aa4.15□□□□□ -1.75
RTN4-209ENST00000405240 SLMAPQ14BN4 828 aa4.15□□□□□ -1.75
RTN4-209ENST00000405240 ANKRD20A8PQ5CZ79 823 aa4.15□□□□□ -1.75
RTN4-209ENST00000405240 C6orf118Q5T5N4 469 aa4.15□□□□□ -1.75
RTN4-209ENST00000405240 DCAF8Q5TAQ9 597 aa4.15□□□□□ -1.75
RTN4-209ENST00000405240 KRT39Q6A163 491 aa4.15□□□□□ -1.75
RTN4-209ENST00000405240 ANO5Q75V66 913 aa4.15□□□□□ -1.75
RTN4-209ENST00000405240 TRMT10CQ7L0Y3 403 aaKnown RBP4.15□□□□□ -1.75
RTN4-209ENST00000405240 SLC47A2Q86VL8 602 aa4.15□□□□□ -1.75
RTN4-209ENST00000405240 HOOK3Q86VS8 718 aa4.15□□□□□ -1.75
RTN4-209ENST00000405240 CDAN1Q8IWY9 1227 aa4.15□□□□□ -1.75
RTN4-209ENST00000405240 FBXO25Q8TCJ0 367 aa4.15□□□□□ -1.75
RTN4-209ENST00000405240 BSNDQ8WZ55 320 aa4.15□□□□□ -1.75
RTN4-209ENST00000405240 ZNF622Q969S3 477 aaKnown RBP eCLIP4.15□□□□□ -1.75
RTN4-209ENST00000405240 MAGOHBQ96A72 148 aaKnown RBP4.15□□□□□ -1.75
RTN4-209ENST00000405240 FAM212AQ96EL1 285 aa4.15□□□□□ -1.75
RTN4-209ENST00000405240 JPH2Q9BR39 696 aaPredicted RBP4.15□□□□□ -1.75
RTN4-209ENST00000405240 PXMP2Q9NR77 195 aa4.15□□□□□ -1.75
RTN4-209ENST00000405240 FBXO28Q9NVF7 368 aa4.15□□□□□ -1.75
RTN4-209ENST00000405240 LGALS13Q9UHV8 139 aa4.15□□□□□ -1.75
RTN4-209ENST00000405240 NOVA2Q9UNW9 492 aaKnown RBP4.15□□□□□ -1.75
RTN4-209ENST00000405240 SLC12A4Q9UP95 1085 aa4.15□□□□□ -1.75
RTN4-209ENST00000405240 UMODL1Q5DID0 1318 aa4.15□□□□□ -1.75
RTN4-209ENST00000405240 TCRBV5S1A1TA0A578 114 aa4.15□□□□□ -1.75
RTN4-209ENST00000405240 GOLGA6L10A6NI86 522 aa4.15□□□□□ -1.75
RTN4-209ENST00000405240 TCP10L2B9ZVM9 353 aa4.15□□□□□ -1.75
RTN4-209ENST00000405240 DNM1LO00429 736 aa4.15□□□□□ -1.75
RTN4-209ENST00000405240 ATP2A1O14983 1001 aa4.15□□□□□ -1.75
RTN4-209ENST00000405240 MAFGO15525 162 aa4.15□□□□□ -1.75
RTN4-209ENST00000405240 ATG7O95352 703 aa4.15□□□□□ -1.75
RTN4-209ENST00000405240 FDX1P10109 184 aa4.15□□□□□ -1.75
RTN4-209ENST00000405240 MYBL1P10243 752 aa4.15□□□□□ -1.75
RTN4-209ENST00000405240 TMOD1P28289 359 aa4.15□□□□□ -1.75
RTN4-209ENST00000405240 CHRNA5P30532 468 aa4.15□□□□□ -1.75
RTN4-209ENST00000405240 ABCD1P33897 745 aa4.15□□□□□ -1.75
RTN4-209ENST00000405240 PTPN7P35236 360 aa4.15□□□□□ -1.75
RTN4-209ENST00000405240 SLC1A1P43005 524 aa4.15□□□□□ -1.75
RTN4-209ENST00000405240 GCLMP48507 274 aa4.15□□□□□ -1.75
RTN4-209ENST00000405240 DNA2P51530 1060 aa4.15□□□□□ -1.75
RTN4-209ENST00000405240 GSCP56915 257 aaPredicted RBP4.15□□□□□ -1.75
RTN4-209ENST00000405240 ZNF280AP59817 542 aaPredicted RBP4.15□□□□□ -1.75
RTN4-209ENST00000405240 KRT76Q01546 638 aa4.15□□□□□ -1.75
RTN4-209ENST00000405240 CENPCQ03188 943 aa4.15□□□□□ -1.75
RTN4-209ENST00000405240 ADCY2Q08462 1091 aa4.15□□□□□ -1.75
RTN4-209ENST00000405240 HLTFQ14527 1009 aaKnown RBP eCLIP4.15□□□□□ -1.751e-8■■□□□ 13
RTN4-209ENST00000405240 SNRNP35Q16560 246 aaKnown RBP4.15□□□□□ -1.75
RTN4-209ENST00000405240 SPRED3Q2MJR0 410 aa4.15□□□□□ -1.75
RTN4-209ENST00000405240 MEX3CQ5U5Q3 659 aaKnown RBP4.15□□□□□ -1.75
RTN4-209ENST00000405240 RTKN2Q8IZC4 609 aa4.15□□□□□ -1.75
RTN4-209ENST00000405240 UBLCP1Q8WVY7 318 aaPredicted RBP4.15□□□□□ -1.75
RTN4-209ENST00000405240 ZNF516Q92618 1163 aa4.15□□□□□ -1.75
RTN4-209ENST00000405240 GPRASP2Q96D09 838 aa4.15□□□□□ -1.75
RTN4-209ENST00000405240 DDX27Q96GQ7 796 aaKnown RBP4.15□□□□□ -1.75
RTN4-209ENST00000405240 YY1AP1Q9H869 796 aa4.15□□□□□ -1.75
RTN4-209ENST00000405240 TMOD4Q9NZQ9 345 aa4.15□□□□□ -1.75
RTN4-209ENST00000405240 ARHGAP28Q9P2N2 729 aa4.15□□□□□ -1.75
RTN4-209ENST00000405240 RASAL2Q9UJF2 1139 aa4.15□□□□□ -1.75
RTN4-209ENST00000405240 ZNF112Q9UJU3 913 aa4.15□□□□□ -1.75
RTN4-209ENST00000405240 CCDC169A6NNP5 214 aa4.14□□□□□ -1.75
RTN4-209ENST00000405240 SORBS3O60504 671 aa4.14□□□□□ -1.75
RTN4-209ENST00000405240 ATP9AO75110 1047 aa4.14□□□□□ -1.75
RTN4-209ENST00000405240 RGS20O76081 388 aa4.14□□□□□ -1.75
RTN4-209ENST00000405240 C4BPAP04003 597 aaKnown RBP4.14□□□□□ -1.75
RTN4-209ENST00000405240 ASNSP08243 561 aa4.14□□□□□ -1.75
RTN4-209ENST00000405240 GSTA1P08263 222 aa4.14□□□□□ -1.75
RTN4-209ENST00000405240 KCNA2P16389 499 aa4.14□□□□□ -1.75
RTN4-209ENST00000405240 ABCB4P21439 1286 aa4.14□□□□□ -1.75
RTN4-209ENST00000405240 MAN1A1P33908 653 aa4.14□□□□□ -1.75
RTN4-209ENST00000405240 NPTX2P47972 431 aa4.14□□□□□ -1.75
RTN4-209ENST00000405240 MXI1P50539 228 aa4.14□□□□□ -1.75
RTN4-209ENST00000405240 UBXN2AP68543 259 aa4.14□□□□□ -1.75
RTN4-209ENST00000405240 CETN1Q12798 172 aa4.14□□□□□ -1.75
RTN4-209ENST00000405240 ZNF211Q13398 564 aaPredicted RBP4.14□□□□□ -1.75
RTN4-209ENST00000405240 ARHGAP44Q17R89 818 aa4.14□□□□□ -1.75
RTN4-209ENST00000405240 GALNTL6Q49A17 601 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms