RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 ODR4Q5SWX8 454 aa21.3■■□□□ 1
CCDC47-202ENST00000403162 RUNDC3BQ96NL0 473 aa21.3■■□□□ 1
CCDC47-202ENST00000403162 NACC1Q96RE7 527 aa21.3■■□□□ 1
CCDC47-202ENST00000403162 SEMA4AQ9H3S1 761 aa21.3■■□□□ 1
CCDC47-202ENST00000403162 EXOC3O60645 756 aa21.3■■□□□ 1
CCDC47-202ENST00000403162 MTA2O94776 668 aa21.3■■□□□ 1
CCDC47-202ENST00000403162 PEX5P50542 639 aa21.3■■□□□ 1
CCDC47-202ENST00000403162 SLMAPQ14BN4 828 aa21.3■■□□□ 1
CCDC47-202ENST00000403162 TTC27Q6P3X3 843 aa21.3■■□□□ 1
CCDC47-202ENST00000403162 SPICE1Q8N0Z3 855 aa21.3■■□□□ 1
CCDC47-202ENST00000403162 INTS9Q9NV88 658 aaKnown RBP21.3■■□□□ 1
CCDC47-202ENST00000403162 DOCK1Q14185 1865 aa21.29■■□□□ 1
CCDC47-202ENST00000403162 TLDC2A0PJX2 215 aa21.29■■□□□ 1
CCDC47-202ENST00000403162 MGRN1O60291 552 aa21.29■■□□□ 1
CCDC47-202ENST00000403162 IREB2P48200 963 aaKnown RBP21.29■■□□□ 1
CCDC47-202ENST00000403162 MARCKSL1P49006 195 aa21.29■■□□□ 1
CCDC47-202ENST00000403162 IFI35P80217 286 aaPredicted RBP21.29■■□□□ 1
CCDC47-202ENST00000403162 SEL1L2Q5TEA6 688 aa21.29■■□□□ 1
CCDC47-202ENST00000403162 CCDC137Q6PK04 289 aaKnown RBP21.29■■□□□ 1
CCDC47-202ENST00000403162 FAM228AQ86W67 206 aa21.29■■□□□ 1
CCDC47-202ENST00000403162 ZDHHC14Q8IZN3 488 aa21.29■■□□□ 1
CCDC47-202ENST00000403162 WNT8AQ9H1J5 351 aa21.29■■□□□ 1
CCDC47-202ENST00000403162 CXorf56Q9H5V9 222 aa21.29■■□□□ 1
CCDC47-202ENST00000403162 TPX2Q9ULW0 747 aaKnown RBP21.29■■□□□ 1
CCDC47-202ENST00000403162 P4HA2O15460 535 aa21.29■■□□□ 1
CCDC47-202ENST00000403162 CHMP2AO43633 222 aa21.29■■□□□ 1
CCDC47-202ENST00000403162 RTN2O75298 545 aa21.29■■□□□ 1
CCDC47-202ENST00000403162 PTPRAP18433 802 aa21.29■■□□□ 1
CCDC47-202ENST00000403162 NEDD9Q14511 834 aa21.29■■□□□ 1
CCDC47-202ENST00000403162 GPATCH11Q8N954 259 aa21.29■■□□□ 1
CCDC47-202ENST00000403162 UBE2TQ9NPD8 197 aaPredicted RBP21.29■■□□□ 1
CCDC47-202ENST00000403162 MCM8Q9UJA3 840 aa21.29■■□□□ 1
CCDC47-202ENST00000403162 SLC12A4Q9UP95 1085 aa21.29■■□□□ 1
CCDC47-202ENST00000403162 RIPK2O43353 540 aa21.28■■□□□ 1
CCDC47-202ENST00000403162 RARGP13631 454 aa21.28■■□□□ 1
CCDC47-202ENST00000403162 NOL9Q5SY16 702 aaKnown RBP21.28■■□□□ 1
CCDC47-202ENST00000403162 LRRC34Q8IZ02 419 aa21.28■■□□□ 1
CCDC47-202ENST00000403162 TMEM174Q8WUU8 243 aa21.28■■□□□ 1
CCDC47-202ENST00000403162 CD101Q93033 1021 aa21.28■■□□□ 1
CCDC47-202ENST00000403162 ZNF408Q9H9D4 720 aa21.28■■□□□ 1
CCDC47-202ENST00000403162 VGLL4Q14135 290 aa21.27■■□□□ 1
CCDC47-202ENST00000403162 MFSD5Q6N075 450 aa21.27■■□□□ 1
CCDC47-202ENST00000403162 SLC30A10Q6XR72 485 aa21.27■■□□□ 1
CCDC47-202ENST00000403162 MOB2Q70IA6 237 aa21.27■■□□□ 1
CCDC47-202ENST00000403162 INTS8Q75QN2 995 aaKnown RBP21.27■■□□□ 1
CCDC47-202ENST00000403162 CYFIP1Q7L576 1253 aa21.27■■□□□ 1
CCDC47-202ENST00000403162 SYCP3Q8IZU3 236 aa21.27■■□□□ 1
CCDC47-202ENST00000403162 ART4Q93070 314 aa21.27■■□□□ 1
CCDC47-202ENST00000403162 WRAP73Q9P2S5 460 aaPredicted RBP21.27■■□□□ 1
CCDC47-202ENST00000403162 CSADQ9Y600 493 aa21.27■■□□□ 1
CCDC47-202ENST00000403162 GAS7O60861 476 aa21.27■■□□□ 1
CCDC47-202ENST00000403162 ATP2C2O75185 946 aa21.27■■□□□ 1
CCDC47-202ENST00000403162 COMTP21964 271 aa21.27■■□□□ 1
CCDC47-202ENST00000403162 CETN1Q12798 172 aa21.27■■□□□ 1
CCDC47-202ENST00000403162 TRAF1Q13077 416 aa21.27■■□□□ 1
CCDC47-202ENST00000403162 ARHGEF19Q8IW93 802 aa21.27■■□□□ 1
CCDC47-202ENST00000403162 RPUSD2Q8IZ73 545 aaKnown RBP21.27■■□□□ 1
CCDC47-202ENST00000403162 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.27■■□□□ 1
CCDC47-202ENST00000403162 SAMD15Q9P1V8 674 aa21.27■■□□□ 1
CCDC47-202ENST00000403162 PRR12Q9ULL5 1215 aa21.27■■□□□ 1
CCDC47-202ENST00000403162 ZHX2Q9Y6X8 837 aa21.27■■□□□ 1
CCDC47-202ENST00000403162 SMCHD1A6NHR9 2005 aa21.27■■□□□ 1
CCDC47-202ENST00000403162 EMSYQ7Z589 1322 aa21.27■□□□□ 0.99
CCDC47-202ENST00000403162 LOC102724159A0A0B4J2E5 919 aa21.26■□□□□ 0.99
CCDC47-202ENST00000403162 SMIM23A6NLE4 172 aa21.26■□□□□ 0.99
CCDC47-202ENST00000403162 COILP38432 576 aaPredicted RBP21.26■□□□□ 0.99
CCDC47-202ENST00000403162 PWP2Q15269 919 aaKnown RBP21.26■□□□□ 0.99
CCDC47-202ENST00000403162 EPC2Q52LR7 807 aa21.26■□□□□ 0.99
CCDC47-202ENST00000403162 BANK1Q8NDB2 785 aa21.26■□□□□ 0.99
CCDC47-202ENST00000403162 EPS8L3Q8TE67 593 aaKnown RBP21.26■□□□□ 0.99
CCDC47-202ENST00000403162 WDR11Q9BZH6 1224 aa21.26■□□□□ 0.99
CCDC47-202ENST00000403162 ROPN1BQ9BZX4 212 aaPredicted RBP21.26■□□□□ 0.99
CCDC47-202ENST00000403162 NSRP1Q9H0G5 558 aaKnown RBP21.26■□□□□ 0.99
CCDC47-202ENST00000403162 ROPN1Q9HAT0 212 aaPredicted RBP21.26■□□□□ 0.99
CCDC47-202ENST00000403162 AS3MTQ9HBK9 375 aa21.26■□□□□ 0.99
CCDC47-202ENST00000403162 MTUS1Q9ULD2 1270 aa21.26■□□□□ 0.99
CCDC47-202ENST00000403162 TMEM110-MUSTN1A8MSY1 372 aa21.26■□□□□ 0.99
CCDC47-202ENST00000403162 TULP1O00294 542 aaPredicted RBP21.26■□□□□ 0.99
CCDC47-202ENST00000403162 RASGRF2O14827 1237 aa21.26■□□□□ 0.99
CCDC47-202ENST00000403162 GZMAP12544 262 aa21.26■□□□□ 0.99
CCDC47-202ENST00000403162 SLC8A1P32418 973 aa21.26■□□□□ 0.99
CCDC47-202ENST00000403162 SPP2Q13103 211 aa21.26■□□□□ 0.99
CCDC47-202ENST00000403162 AUHQ13825 339 aaKnown RBP21.26■□□□□ 0.99
CCDC47-202ENST00000403162 UBAP2Q5T6F2 1119 aaKnown RBP21.26■□□□□ 0.99
CCDC47-202ENST00000403162 TAOK1Q7L7X3 1001 aa21.26■□□□□ 0.99
CCDC47-202ENST00000403162 C12orf50Q8NA57 414 aaPredicted RBP21.26■□□□□ 0.99
CCDC47-202ENST00000403162 PRMT1Q99873 361 aaKnown RBP21.26■□□□□ 0.99
CCDC47-202ENST00000403162 SNCAIPQ9Y6H5 919 aa21.26■□□□□ 0.99
CCDC47-202ENST00000403162 PASKQ96RG2 1323 aa21.25■□□□□ 0.99
CCDC47-202ENST00000403162 FAM170AA1A519 330 aa21.25■□□□□ 0.99
CCDC47-202ENST00000403162 HIP1RO75146 1068 aa21.25■□□□□ 0.99
CCDC47-202ENST00000403162 PYGMP11217 842 aa21.25■□□□□ 0.99
CCDC47-202ENST00000403162 FGFR4P22455 802 aa21.25■□□□□ 0.99
CCDC47-202ENST00000403162 DLG4P78352 724 aa21.25■□□□□ 0.99
CCDC47-202ENST00000403162 ELF3P78545 371 aaPredicted RBP21.25■□□□□ 0.99
CCDC47-202ENST00000403162 MTMR2Q13614 643 aa21.25■□□□□ 0.99
CCDC47-202ENST00000403162 MESDQ14696 234 aa21.25■□□□□ 0.99
CCDC47-202ENST00000403162 CHADLQ6NUI6 762 aa21.25■□□□□ 0.99
CCDC47-202ENST00000403162 SLC13A5Q86YT5 568 aaPredicted RBP21.25■□□□□ 0.99
CCDC47-202ENST00000403162 RDH13Q8NBN7 331 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms