RNA–Protein interactions for RNA: ENST00000402989.5

SMC6-203, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMC6, Length 3,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-203ENST00000402989 CHRNB2P17787 502 aa4.68□□□□□ -1.66
SMC6-203ENST00000402989 ECHS1P30084 290 aa4.68□□□□□ -1.66
SMC6-203ENST00000402989 HSPA9P38646 679 aaKnown RBP4.68□□□□□ -1.66
SMC6-203ENST00000402989 MDH1P40925 334 aaKnown RBP4.68□□□□□ -1.66
SMC6-203ENST00000402989 PSMC4P43686 418 aa4.68□□□□□ -1.66
SMC6-203ENST00000402989 RPL21P46778 160 aaKnown RBP4.68□□□□□ -1.66
SMC6-203ENST00000402989 HSD17B4P51659 736 aa4.68□□□□□ -1.66
SMC6-203ENST00000402989 PPATQ06203 517 aa4.68□□□□□ -1.66
SMC6-203ENST00000402989 ORC1Q13415 861 aa4.68□□□□□ -1.66
SMC6-203ENST00000402989 PCNX4Q63HM2 1172 aa4.68□□□□□ -1.66
SMC6-203ENST00000402989 KRT39Q6A163 491 aa4.68□□□□□ -1.66
SMC6-203ENST00000402989 SCARA3Q6AZY7 606 aa4.68□□□□□ -1.66
SMC6-203ENST00000402989 FOXR2Q6PJQ5 311 aa4.68□□□□□ -1.66
SMC6-203ENST00000402989 TMEM270Q6UE05 265 aa4.68□□□□□ -1.66
SMC6-203ENST00000402989 GSTA5Q7RTV2 222 aa4.68□□□□□ -1.66
SMC6-203ENST00000402989 TMC3Q7Z5M5 1100 aa4.68□□□□□ -1.66
SMC6-203ENST00000402989 PACS2Q86VP3 889 aa4.68□□□□□ -1.66
SMC6-203ENST00000402989 NLRP14Q86W24 1093 aa4.68□□□□□ -1.66
SMC6-203ENST00000402989 ANKRD35Q8N283 1001 aa4.68□□□□□ -1.66
SMC6-203ENST00000402989 LMO3Q8TAP4 145 aa4.68□□□□□ -1.66
SMC6-203ENST00000402989 ZNF473Q8WTR7 871 aaKnown RBP4.68□□□□□ -1.66
SMC6-203ENST00000402989 DYDC1Q8WWB3 177 aa4.68□□□□□ -1.66
SMC6-203ENST00000402989 RNF25Q96BH1 459 aaPredicted RBP4.68□□□□□ -1.66
SMC6-203ENST00000402989 CCT8L2Q96SF2 557 aa4.68□□□□□ -1.66
SMC6-203ENST00000402989 ZSWIM1Q9BR11 485 aa4.68□□□□□ -1.66
SMC6-203ENST00000402989 TARS2Q9BW92 718 aaKnown RBP4.68□□□□□ -1.66
SMC6-203ENST00000402989 RAB17Q9H0T7 212 aa4.68□□□□□ -1.66
SMC6-203ENST00000402989 SEMA4AQ9H3S1 761 aa4.68□□□□□ -1.66
SMC6-203ENST00000402989 SLC38A10Q9HBR0 1119 aa4.68□□□□□ -1.66
SMC6-203ENST00000402989 TBC1D22BQ9NU19 505 aa4.68□□□□□ -1.66
SMC6-203ENST00000402989 RAB20Q9NX57 234 aa4.68□□□□□ -1.66
SMC6-203ENST00000402989 RASAL2Q9UJF2 1139 aa4.68□□□□□ -1.66
SMC6-203ENST00000402989 STXBP5LQ9Y2K9 1186 aa4.68□□□□□ -1.66
SMC6-203ENST00000402989 PCDHB4Q9Y5E5 795 aa4.68□□□□□ -1.66
SMC6-203ENST00000402989 PCDHA10Q9Y5I2 948 aa4.68□□□□□ -1.66
SMC6-203ENST00000402989 UBIAD1Q9Y5Z9 338 aa4.68□□□□□ -1.66
SMC6-203ENST00000402989 DOCK5Q9H7D0 1870 aa4.67□□□□□ -1.66
SMC6-203ENST00000402989 GOLGA6L7A0A1B0GV03 622 aa4.67□□□□□ -1.66
SMC6-203ENST00000402989 RTN2O75298 545 aa4.67□□□□□ -1.66
SMC6-203ENST00000402989 CSDE1O75534 798 aaKnown RBP4.67□□□□□ -1.66
SMC6-203ENST00000402989 VIMP08670 466 aaKnown RBP4.67□□□□□ -1.66
SMC6-203ENST00000402989 ATF7P17544 494 aaPredicted RBP4.67□□□□□ -1.66
SMC6-203ENST00000402989 RRM1P23921 792 aa4.67□□□□□ -1.66
SMC6-203ENST00000402989 CCND2P30279 289 aa4.67□□□□□ -1.66
SMC6-203ENST00000402989 HOXA7P31268 230 aaPredicted RBP4.67□□□□□ -1.66
SMC6-203ENST00000402989 PMS2P54278 862 aa4.67□□□□□ -1.66
SMC6-203ENST00000402989 WNT7BP56706 349 aa4.67□□□□□ -1.66
SMC6-203ENST00000402989 NLRP11P59045 1033 aaKnown RBP4.67□□□□□ -1.66
SMC6-203ENST00000402989 IFI35P80217 286 aaPredicted RBP4.67□□□□□ -1.66
SMC6-203ENST00000402989 FMO1Q01740 532 aa4.67□□□□□ -1.66
SMC6-203ENST00000402989 STRN3Q13033 797 aa4.67□□□□□ -1.66
SMC6-203ENST00000402989 SLC29A2Q14542 456 aa4.67□□□□□ -1.66
SMC6-203ENST00000402989 PTGISQ16647 500 aa4.67□□□□□ -1.66
SMC6-203ENST00000402989 LONRF1Q17RB8 773 aa4.67□□□□□ -1.66
SMC6-203ENST00000402989 SGO2Q562F6 1265 aa4.67□□□□□ -1.66
SMC6-203ENST00000402989 ARHGAP27Q6ZUM4 889 aa4.67□□□□□ -1.66
SMC6-203ENST00000402989 TRIM50Q86XT4 487 aa4.67□□□□□ -1.66
SMC6-203ENST00000402989 PRELID2Q8N945 189 aa4.67□□□□□ -1.66
SMC6-203ENST00000402989 TMEM161BQ8NDZ6 487 aa4.67□□□□□ -1.66
SMC6-203ENST00000402989 FBXL13Q8NEE6 735 aa4.67□□□□□ -1.66
SMC6-203ENST00000402989 DEPTORQ8TB45 409 aa4.67□□□□□ -1.66
SMC6-203ENST00000402989 PARD3BQ8TEW8 1205 aa4.67□□□□□ -1.66
SMC6-203ENST00000402989 ZNF526Q8TF50 670 aaPredicted RBP4.67□□□□□ -1.66
SMC6-203ENST00000402989 ATP8B4Q8TF62 1192 aa4.67□□□□□ -1.66
SMC6-203ENST00000402989 THOC1Q96FV9 657 aaKnown RBP4.67□□□□□ -1.66
SMC6-203ENST00000402989 PAIP2Q9BPZ3 127 aaKnown RBP4.67□□□□□ -1.66
SMC6-203ENST00000402989 ERP44Q9BS26 406 aa4.67□□□□□ -1.66
SMC6-203ENST00000402989 DDX23Q9BUQ8 820 aaKnown RBP4.67□□□□□ -1.66
SMC6-203ENST00000402989 TMBIM4Q9HC24 238 aa4.67□□□□□ -1.66
SMC6-203ENST00000402989 KCNK9Q9NPC2 374 aa4.67□□□□□ -1.66
SMC6-203ENST00000402989 TMEM51Q9NW97 253 aa4.67□□□□□ -1.66
SMC6-203ENST00000402989 PIM2Q9P1W9 311 aa4.67□□□□□ -1.66
SMC6-203ENST00000402989 TTC7AQ9ULT0 858 aaPredicted RBP4.67□□□□□ -1.66
SMC6-203ENST00000402989 EXOC7Q9UPT5 735 aa4.67□□□□□ -1.66
SMC6-203ENST00000402989 CD2APQ9Y5K6 639 aa4.67□□□□□ -1.66
SMC6-203ENST00000402989 NCANO14594 1321 aa4.67□□□□□ -1.66
SMC6-203ENST00000402989 HMGB1P1B2RPK0 211 aaPredicted RBP4.67□□□□□ -1.66
SMC6-203ENST00000402989 RGS16O15492 202 aaPredicted RBP4.67□□□□□ -1.66
SMC6-203ENST00000402989 THAP12O43422 761 aa4.67□□□□□ -1.66
SMC6-203ENST00000402989 CTNND1O60716 968 aaKnown RBP4.67□□□□□ -1.66
SMC6-203ENST00000402989 ABCB7O75027 752 aa4.67□□□□□ -1.66
SMC6-203ENST00000402989 RARAP10276 462 aa4.67□□□□□ -1.66
SMC6-203ENST00000402989 ACTR2P61160 394 aa4.67□□□□□ -1.66
SMC6-203ENST00000402989 DYNLT1P63172 113 aa4.67□□□□□ -1.66
SMC6-203ENST00000402989 KRT76Q01546 638 aa4.67□□□□□ -1.66
SMC6-203ENST00000402989 CALCOCO2Q13137 446 aa4.67□□□□□ -1.66
SMC6-203ENST00000402989 KIF22Q14807 665 aa4.67□□□□□ -1.66
SMC6-203ENST00000402989 ZKSCAN8Q15776 578 aaPredicted RBP4.67□□□□□ -1.66
SMC6-203ENST00000402989 QPCTQ16769 361 aa4.67□□□□□ -1.66
SMC6-203ENST00000402989 DALRD3Q5D0E6 543 aaKnown RBP4.67□□□□□ -1.66
SMC6-203ENST00000402989 WDR44Q5JSH3 913 aa4.67□□□□□ -1.66
SMC6-203ENST00000402989 SYCP2LQ5T4T6 812 aa4.67□□□□□ -1.66
SMC6-203ENST00000402989 CYP4F22Q6NT55 531 aa4.67□□□□□ -1.66
SMC6-203ENST00000402989 RUFY4Q6ZNE9 571 aa4.67□□□□□ -1.66
SMC6-203ENST00000402989 NCAPG2Q86XI2 1143 aa4.67□□□□□ -1.66
SMC6-203ENST00000402989 RHOT2Q8IXI1 618 aa4.67□□□□□ -1.66
SMC6-203ENST00000402989 ZDHHC14Q8IZN3 488 aa4.67□□□□□ -1.66
SMC6-203ENST00000402989 LRRC71Q8N4P6 559 aa4.67□□□□□ -1.66
SMC6-203ENST00000402989 MSL3Q8N5Y2 521 aaKnown RBP4.67□□□□□ -1.66
SMC6-203ENST00000402989 GDAP1Q8TB36 358 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms