RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 ERAP1Q9NZ08 941 aa13.24□□□□□ -0.29
CLIP4-203ENST00000401617 CNTNAP2Q9UHC6 1331 aa13.24□□□□□ -0.29
CLIP4-203ENST00000401617 TTLL13PA6NNM8 815 aa13.24□□□□□ -0.29
CLIP4-203ENST00000401617 ABLIM1O14639 778 aa13.24□□□□□ -0.29
CLIP4-203ENST00000401617 CHRNB2P17787 502 aa13.24□□□□□ -0.29
CLIP4-203ENST00000401617 TCEAL1Q15170 157 aa13.24□□□□□ -0.29
CLIP4-203ENST00000401617 ZNF484Q5JVG2 852 aa13.24□□□□□ -0.29
CLIP4-203ENST00000401617 CST9Q5W186 159 aa13.24□□□□□ -0.29
CLIP4-203ENST00000401617 EPS8L1Q8TE68 723 aa13.24□□□□□ -0.29
CLIP4-203ENST00000401617 SLC20A1Q8WUM9 679 aa13.24□□□□□ -0.29
CLIP4-203ENST00000401617 HNRNPLLQ8WVV9 542 aaKnown RBP13.24□□□□□ -0.29
CLIP4-203ENST00000401617 PNKPQ96T60 521 aa13.24□□□□□ -0.29
CLIP4-203ENST00000401617 ACO2Q99798 780 aaKnown RBP13.24□□□□□ -0.29
CLIP4-203ENST00000401617 MRPL4Q9BYD3 311 aaKnown RBP13.24□□□□□ -0.29
CLIP4-203ENST00000401617 ISCUQ9H1K1 167 aa13.24□□□□□ -0.29
CLIP4-203ENST00000401617 SUGCTQ9HAC7 445 aa13.24□□□□□ -0.29
CLIP4-203ENST00000401617 PDE11AQ9HCR9 933 aa13.24□□□□□ -0.29
CLIP4-203ENST00000401617 SUCLA2Q9P2R7 463 aaPredicted RBP13.24□□□□□ -0.29
CLIP4-203ENST00000401617 IVNS1ABPQ9Y6Y0 642 aa13.24□□□□□ -0.29
CLIP4-203ENST00000401617 KAT6AQ92794 2004 aa13.23□□□□□ -0.29
CLIP4-203ENST00000401617 ANKRD62A6NC57 917 aa13.23□□□□□ -0.29
CLIP4-203ENST00000401617 CES2O00748 559 aa13.23□□□□□ -0.29
CLIP4-203ENST00000401617 ASAP2O43150 1006 aa13.23□□□□□ -0.29
CLIP4-203ENST00000401617 TOM1L1O75674 476 aa13.23□□□□□ -0.29
CLIP4-203ENST00000401617 LGALS2P05162 132 aa13.23□□□□□ -0.29
CLIP4-203ENST00000401617 HOXD8P13378 290 aaPredicted RBP13.23□□□□□ -0.29
CLIP4-203ENST00000401617 GRM1Q13255 1194 aa13.23□□□□□ -0.29
CLIP4-203ENST00000401617 ZBTB41Q5SVQ8 909 aa13.23□□□□□ -0.29
CLIP4-203ENST00000401617 CC2D1AQ6P1N0 951 aaPredicted RBP13.23□□□□□ -0.29
CLIP4-203ENST00000401617 WDR93Q6P2C0 686 aa13.23□□□□□ -0.29
CLIP4-203ENST00000401617 TMCO3Q6UWJ1 677 aa13.23□□□□□ -0.29
CLIP4-203ENST00000401617 PALB2Q86YC2 1186 aa13.23□□□□□ -0.29
CLIP4-203ENST00000401617 LRRC71Q8N4P6 559 aa13.23□□□□□ -0.29
CLIP4-203ENST00000401617 MMGT1Q8N4V1 131 aa13.23□□□□□ -0.29
CLIP4-203ENST00000401617 LINC01465Q8N7H1 131 aa13.23□□□□□ -0.29
CLIP4-203ENST00000401617 TATDN2Q93075 761 aa13.23□□□□□ -0.29
CLIP4-203ENST00000401617 MAML3Q96JK9 1138 aa13.23□□□□□ -0.29
CLIP4-203ENST00000401617 FNBP1Q96RU3 617 aa13.23□□□□□ -0.29
CLIP4-203ENST00000401617 CGRRF1Q99675 332 aa13.23□□□□□ -0.29
CLIP4-203ENST00000401617 RNPEPQ9H4A4 650 aa13.23□□□□□ -0.29
CLIP4-203ENST00000401617 TAS2R14Q9NYV8 317 aa13.23□□□□□ -0.29
CLIP4-203ENST00000401617 RBAKQ9NYW8 714 aaPredicted RBP13.23□□□□□ -0.29
CLIP4-203ENST00000401617 STXBP5LQ9Y2K9 1186 aa13.23□□□□□ -0.29
CLIP4-203ENST00000401617 ANK1P16157 1881 aa13.23□□□□□ -0.29
CLIP4-203ENST00000401617 PTPRJQ12913 1337 aa13.23□□□□□ -0.29
CLIP4-203ENST00000401617 ATP8B1O43520 1251 aa13.22□□□□□ -0.29
CLIP4-203ENST00000401617 SGPL1O95470 568 aa13.22□□□□□ -0.29
CLIP4-203ENST00000401617 VNN1O95497 513 aa13.22□□□□□ -0.29
CLIP4-203ENST00000401617 C22orf31O95567 290 aa13.22□□□□□ -0.29
CLIP4-203ENST00000401617 FTCDO95954 541 aa13.22□□□□□ -0.29
CLIP4-203ENST00000401617 GZMAP12544 262 aa13.22□□□□□ -0.29
CLIP4-203ENST00000401617 PROZP22891 400 aa13.22□□□□□ -0.29
CLIP4-203ENST00000401617 MAPK4P31152 587 aa13.22□□□□□ -0.29
CLIP4-203ENST00000401617 HADHBP55084 474 aaKnown RBP13.22□□□□□ -0.29
CLIP4-203ENST00000401617 POU5F1BQ06416 359 aa13.22□□□□□ -0.29
CLIP4-203ENST00000401617 MCL1Q07820 350 aa13.22□□□□□ -0.29
CLIP4-203ENST00000401617 GJC2Q5T442 439 aaPredicted RBP13.22□□□□□ -0.29
CLIP4-203ENST00000401617 TDRD10Q5VZ19 366 aaKnown RBP13.22□□□□□ -0.29
CLIP4-203ENST00000401617 ILDR2Q71H61 639 aa13.22□□□□□ -0.29
CLIP4-203ENST00000401617 PLEKHH3Q7Z736 793 aa13.22□□□□□ -0.29
CLIP4-203ENST00000401617 NOP9Q86U38 636 aaKnown RBP13.22□□□□□ -0.29
CLIP4-203ENST00000401617 BRSK2Q8IWQ3 736 aa13.22□□□□□ -0.29
CLIP4-203ENST00000401617 ZBTB8OSQ8IWT0 167 aa13.22□□□□□ -0.29
CLIP4-203ENST00000401617 RNF149Q8NC42 400 aa13.22□□□□□ -0.29
CLIP4-203ENST00000401617 LMBR1Q8WVP7 490 aa13.22□□□□□ -0.29
CLIP4-203ENST00000401617 TRAPPC12Q8WVT3 735 aa13.22□□□□□ -0.29
CLIP4-203ENST00000401617 RFFLQ8WZ73 363 aa13.22□□□□□ -0.29
CLIP4-203ENST00000401617 NFKBIZQ9BYH8 718 aa13.22□□□□□ -0.29
CLIP4-203ENST00000401617 FZD8Q9H461 694 aa13.22□□□□□ -0.29
CLIP4-203ENST00000401617 TRPC6Q9Y210 931 aa13.22□□□□□ -0.29
CLIP4-203ENST00000401617 TARSL2A2RTX5 802 aaKnown RBP13.22□□□□□ -0.29
CLIP4-203ENST00000401617 SLC15A5A6NIM6 579 aa13.22□□□□□ -0.29
CLIP4-203ENST00000401617 CLDN3O15551 220 aa13.22□□□□□ -0.29
CLIP4-203ENST00000401617 CYP26A1O43174 497 aa13.22□□□□□ -0.29
CLIP4-203ENST00000401617 ITGBL1O95965 494 aaPredicted RBP13.22□□□□□ -0.29
CLIP4-203ENST00000401617 HLA-DRAP01903 254 aa13.22□□□□□ -0.29
CLIP4-203ENST00000401617 PRKCBP05771 671 aa13.22□□□□□ -0.29
CLIP4-203ENST00000401617 SRGAP2CP0DJJ0 459 aa13.22□□□□□ -0.29
CLIP4-203ENST00000401617 PTENP60484 403 aa13.22□□□□□ -0.29
CLIP4-203ENST00000401617 TFDP1Q14186 410 aa13.22□□□□□ -0.29
CLIP4-203ENST00000401617 MAPK6Q16659 721 aa13.22□□□□□ -0.29
CLIP4-203ENST00000401617 EFCAB12Q6NXP0 572 aa13.22□□□□□ -0.29
CLIP4-203ENST00000401617 IFNLR1Q8IU57 520 aaPredicted RBP13.22□□□□□ -0.29
CLIP4-203ENST00000401617 RPUSD2Q8IZ73 545 aaKnown RBP13.22□□□□□ -0.29
CLIP4-203ENST00000401617 CAGE1Q8TC20 777 aa13.22□□□□□ -0.29
CLIP4-203ENST00000401617 PCDHB18PQ96TA0 734 aa13.22□□□□□ -0.29
CLIP4-203ENST00000401617 C16orf70Q9BSU1 422 aa13.22□□□□□ -0.29
CLIP4-203ENST00000401617 PTPRHQ9HD43 1115 aa13.22□□□□□ -0.29
CLIP4-203ENST00000401617 ABCB6Q9NP58 842 aa13.22□□□□□ -0.29
CLIP4-203ENST00000401617 MGAMO43451 1857 aa13.22□□□□□ -0.29
CLIP4-203ENST00000401617 COL1A2P08123 1366 aa13.21□□□□□ -0.29
CLIP4-203ENST00000401617 ACKR2O00590 384 aa13.21□□□□□ -0.29
CLIP4-203ENST00000401617 PPFIA4O75335 1185 aa13.21□□□□□ -0.29
CLIP4-203ENST00000401617 RHOXF2BP0C7M4 288 aa13.21□□□□□ -0.29
CLIP4-203ENST00000401617 INSRRP14616 1297 aa13.21□□□□□ -0.29
CLIP4-203ENST00000401617 TNNI1P19237 187 aa13.21□□□□□ -0.29
CLIP4-203ENST00000401617 CXCR5P32302 372 aa13.21□□□□□ -0.29
CLIP4-203ENST00000401617 ADCYAP1R1P41586 468 aa13.21□□□□□ -0.29
CLIP4-203ENST00000401617 NOP2P46087 812 aaKnown RBP13.21□□□□□ -0.29
CLIP4-203ENST00000401617 TSHZ1Q6ZSZ6 1077 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms