RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 MTMR12Q9C0I1 747 aa12.7□□□□□ -0.38
SKA3-203ENST00000400018 UPF3AQ9H1J1 476 aaKnown RBP12.7□□□□□ -0.38
SKA3-203ENST00000400018 FZD8Q9H461 694 aa12.7□□□□□ -0.38
SKA3-203ENST00000400018 GOLGA2P5Q9HBQ8 144 aa12.7□□□□□ -0.38
SKA3-203ENST00000400018 LRRC53A6NM62 1247 aa12.7□□□□□ -0.38
SKA3-203ENST00000400018 FAM189A1O60320 539 aa12.7□□□□□ -0.38
SKA3-203ENST00000400018 SFPQP23246 707 aaKnown RBP eCLIP12.7□□□□□ -0.38
SKA3-203ENST00000400018 PON1P27169 355 aa12.7□□□□□ -0.38
SKA3-203ENST00000400018 CD52P31358 61 aa12.7□□□□□ -0.38
SKA3-203ENST00000400018 FMO5P49326 533 aa12.7□□□□□ -0.38
SKA3-203ENST00000400018 FKBP15Q5T1M5 1219 aa12.7□□□□□ -0.38
SKA3-203ENST00000400018 PPFIBP1Q86W92 1011 aa12.7□□□□□ -0.38
SKA3-203ENST00000400018 FAM114A1Q8IWE2 563 aa12.7□□□□□ -0.38
SKA3-203ENST00000400018 PARD3BQ8TEW8 1205 aa12.7□□□□□ -0.38
SKA3-203ENST00000400018 GLT1D1Q96MS3 346 aa12.7□□□□□ -0.38
SKA3-203ENST00000400018 TIPINQ9BVW5 301 aa12.7□□□□□ -0.38
SKA3-203ENST00000400018 MRPL4Q9BYD3 311 aaKnown RBP12.7□□□□□ -0.38
SKA3-203ENST00000400018 PPP1R12CQ9BZL4 782 aa12.7□□□□□ -0.38
SKA3-203ENST00000400018 ST6GALNAC4Q9H4F1 302 aa12.7□□□□□ -0.38
SKA3-203ENST00000400018 SAGE1Q9NXZ1 904 aa12.7□□□□□ -0.38
SKA3-203ENST00000400018 ACKR2O00590 384 aa12.69□□□□□ -0.38
SKA3-203ENST00000400018 MAGEB2O15479 319 aa12.69□□□□□ -0.38
SKA3-203ENST00000400018 PHKA2P46019 1235 aa12.69□□□□□ -0.38
SKA3-203ENST00000400018 RTP1P59025 263 aa12.69□□□□□ -0.38
SKA3-203ENST00000400018 TFAMQ00059 246 aaKnown RBP12.69□□□□□ -0.38
SKA3-203ENST00000400018 CYP24A1Q07973 514 aa12.69□□□□□ -0.38
SKA3-203ENST00000400018 EPC2Q52LR7 807 aa12.69□□□□□ -0.38
SKA3-203ENST00000400018 CT47A1Q5JQC4 288 aaPredicted RBP12.69□□□□□ -0.38
SKA3-203ENST00000400018 PHLDB3Q6NSJ2 640 aa12.69□□□□□ -0.38
SKA3-203ENST00000400018 TMCO2Q7Z6W1 182 aaPredicted RBP12.69□□□□□ -0.38
SKA3-203ENST00000400018 FAM228AQ86W67 206 aa12.69□□□□□ -0.38
SKA3-203ENST00000400018 EFCAB13Q8IY85 973 aa12.69□□□□□ -0.38
SKA3-203ENST00000400018 C17orf75Q9HAS0 396 aa12.69□□□□□ -0.38
SKA3-203ENST00000400018 PHLPP2Q6ZVD8 1323 aa12.69□□□□□ -0.38
SKA3-203ENST00000400018 SPDYE4A6NLX3 237 aa12.69□□□□□ -0.38
SKA3-203ENST00000400018 MGEA5O60502 916 aa12.69□□□□□ -0.38
SKA3-203ENST00000400018 NFICP08651 508 aa12.69□□□□□ -0.38
SKA3-203ENST00000400018 EIF4BP23588 611 aaKnown RBP12.69□□□□□ -0.38
SKA3-203ENST00000400018 CCL23P55773 120 aa12.69□□□□□ -0.38
SKA3-203ENST00000400018 BIRC3Q13489 604 aa12.69□□□□□ -0.38
SKA3-203ENST00000400018 RAD9BQ6WBX8 426 aa12.69□□□□□ -0.38
SKA3-203ENST00000400018 SV2AQ7L0J3 742 aa12.69□□□□□ -0.38
SKA3-203ENST00000400018 FRMD5Q7Z6J6 570 aa12.69□□□□□ -0.38
SKA3-203ENST00000400018 SESTD1Q86VW0 696 aa12.69□□□□□ -0.38
SKA3-203ENST00000400018 TMEM139Q8IV31 216 aa12.69□□□□□ -0.38
SKA3-203ENST00000400018 ARRDC4Q8NCT1 418 aa12.69□□□□□ -0.38
SKA3-203ENST00000400018 ACRBPQ8NEB7 543 aa12.69□□□□□ -0.38
SKA3-203ENST00000400018 ZFP42Q96MM3 310 aa12.69□□□□□ -0.38
SKA3-203ENST00000400018 SPTLC3Q9NUV7 552 aa12.69□□□□□ -0.38
SKA3-203ENST00000400018 EXOC7Q9UPT5 735 aa12.69□□□□□ -0.38
SKA3-203ENST00000400018 PPEF2O14830 753 aa12.68□□□□□ -0.38
SKA3-203ENST00000400018 TOM1L1O75674 476 aa12.68□□□□□ -0.38
SKA3-203ENST00000400018 TFRCP02786 760 aaKnown RBP12.68□□□□□ -0.38
SKA3-203ENST00000400018 USP8P40818 1118 aa12.68□□□□□ -0.38
SKA3-203ENST00000400018 CYP27A1Q02318 531 aa12.68□□□□□ -0.38
SKA3-203ENST00000400018 TFDP1Q14186 410 aa12.68□□□□□ -0.38
SKA3-203ENST00000400018 MBTPS1Q14703 1052 aa12.68□□□□□ -0.38
SKA3-203ENST00000400018 NOLC1Q14978 699 aaKnown RBP eCLIP12.68□□□□□ -0.38
SKA3-203ENST00000400018 EXOC3L4Q17RC7 722 aa12.68□□□□□ -0.38
SKA3-203ENST00000400018 DPY19L2P1Q6NXN4 242 aa12.68□□□□□ -0.38
SKA3-203ENST00000400018 WDR59Q6PJI9 974 aa12.68□□□□□ -0.38
SKA3-203ENST00000400018 PPP4R3CPQ6ZMV5 832 aa12.68□□□□□ -0.38
SKA3-203ENST00000400018 SIX2Q9NPC8 291 aa12.68□□□□□ -0.38
SKA3-203ENST00000400018 PLAGL2Q9UPG8 496 aa12.68□□□□□ -0.38
SKA3-203ENST00000400018 Q9Y3F1 56 aa12.68□□□□□ -0.38
SKA3-203ENST00000400018 RRN3P2A6NIE6 340 aa12.68□□□□□ -0.38
SKA3-203ENST00000400018 AKR1B15C9JRZ8 316 aaPredicted RBP12.68□□□□□ -0.38
SKA3-203ENST00000400018 MFAP3LO75121 409 aa12.68□□□□□ -0.38
SKA3-203ENST00000400018 TPM3P06753 285 aa12.68□□□□□ -0.38
SKA3-203ENST00000400018 STAG3L1P0CL83 205 aa12.68□□□□□ -0.38
SKA3-203ENST00000400018 KRT13P13646 458 aa12.68□□□□□ -0.38
SKA3-203ENST00000400018 DARSP14868 501 aaKnown RBP12.68□□□□□ -0.38
SKA3-203ENST00000400018 CDC25BP30305 580 aa12.68□□□□□ -0.38
SKA3-203ENST00000400018 PPP1R2P41236 205 aa12.68□□□□□ -0.38
SKA3-203ENST00000400018 MYL7Q01449 175 aa12.68□□□□□ -0.38
SKA3-203ENST00000400018 TDRD10Q5VZ19 366 aaKnown RBP12.68□□□□□ -0.38
SKA3-203ENST00000400018 SCARA5Q6ZMJ2 495 aa12.68□□□□□ -0.38
SKA3-203ENST00000400018 ZNF710Q8N1W2 664 aa12.68□□□□□ -0.38
SKA3-203ENST00000400018 C18orf25Q96B23 403 aaPredicted RBP12.68□□□□□ -0.38
SKA3-203ENST00000400018 PTPRHQ9HD43 1115 aa12.68□□□□□ -0.38
SKA3-203ENST00000400018 CHORDC1Q9UHD1 332 aaPredicted RBP12.68□□□□□ -0.38
SKA3-203ENST00000400018 SMIM35A0A1B0GVV1 85 aa12.68□□□□□ -0.38
SKA3-203ENST00000400018 ZNF233A6NK53 670 aa12.68□□□□□ -0.38
SKA3-203ENST00000400018 LACTBL1A8MY62 500 aa12.68□□□□□ -0.38
SKA3-203ENST00000400018 FGFR1OPO95684 399 aaKnown RBP12.68□□□□□ -0.38
SKA3-203ENST00000400018 KRT19P08727 400 aa12.68□□□□□ -0.38
SKA3-203ENST00000400018 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.68□□□□□ -0.38
SKA3-203ENST00000400018 U2AF1L4Q8WU68 220 aaKnown RBP12.68□□□□□ -0.38
SKA3-203ENST00000400018 ZMAT2Q96NC0 199 aaKnown RBP12.68□□□□□ -0.38
SKA3-203ENST00000400018 KATNAL1Q9BW62 490 aa12.68□□□□□ -0.38
SKA3-203ENST00000400018 IRX2Q9BZI1 471 aaPredicted RBP12.68□□□□□ -0.38
SKA3-203ENST00000400018 TTYH3Q9C0H2 523 aa12.68□□□□□ -0.38
SKA3-203ENST00000400018 TMEM134Q9H6X4 195 aa12.68□□□□□ -0.38
SKA3-203ENST00000400018 ABHD10Q9NUJ1 306 aa12.68□□□□□ -0.38
SKA3-203ENST00000400018 TRIM10Q9UDY6 481 aa12.68□□□□□ -0.38
SKA3-203ENST00000400018 ST3GAL5Q9UNP4 418 aa12.68□□□□□ -0.38
SKA3-203ENST00000400018 SPTBN5Q9NRC6 3674 aaKnown RBP12.67□□□□□ -0.38
SKA3-203ENST00000400018 ZEB2O60315 1214 aa12.67□□□□□ -0.38
SKA3-203ENST00000400018 MNX1P50219 401 aaPredicted RBP12.67□□□□□ -0.38
SKA3-203ENST00000400018 TCTN1Q2MV58 587 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms