RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 NDFIP2Q9NV92 336 aa8.45□□□□□ -1.06
USP47-203ENST00000399455 RNF40O75150 1001 aa8.44□□□□□ -1.06
USP47-203ENST00000399455 ZNF827Q17R98 1081 aa8.44□□□□□ -1.06
USP47-203ENST00000399455 CCDC157Q569K6 752 aa8.44□□□□□ -1.06
USP47-203ENST00000399455 IL31Q6EBC2 164 aa8.44□□□□□ -1.06
USP47-203ENST00000399455 NT5DC4Q86YG4 428 aa8.44□□□□□ -1.06
USP47-203ENST00000399455 AGBL1Q96MI9 1066 aa8.44□□□□□ -1.06
USP47-203ENST00000399455 PDHBP11177 359 aa8.44□□□□□ -1.06
USP47-203ENST00000399455 GCLMP48507 274 aa8.44□□□□□ -1.06
USP47-203ENST00000399455 ERVK-9P63128 1117 aa8.44□□□□□ -1.06
USP47-203ENST00000399455 ERVK-24P63145 666 aa8.44□□□□□ -1.06
USP47-203ENST00000399455 KCNH2Q12809 1159 aa8.44□□□□□ -1.06
USP47-203ENST00000399455 CDH18Q13634 790 aa8.44□□□□□ -1.06
USP47-203ENST00000399455 KRT222Q8N1A0 295 aa8.44□□□□□ -1.06
USP47-203ENST00000399455 CDC26Q8NHZ8 85 aa8.44□□□□□ -1.06
USP47-203ENST00000399455 MAGOHBQ96A72 148 aaKnown RBP8.44□□□□□ -1.06
USP47-203ENST00000399455 SAAL1Q96ER3 474 aa8.44□□□□□ -1.06
USP47-203ENST00000399455 PPP1R13BQ96KQ4 1090 aa8.44□□□□□ -1.06
USP47-203ENST00000399455 TEX12Q9BXU0 123 aa8.44□□□□□ -1.06
USP47-203ENST00000399455 PARVAQ9NVD7 372 aa8.44□□□□□ -1.06
USP47-203ENST00000399455 VPS18Q9P253 973 aa8.44□□□□□ -1.06
USP47-203ENST00000399455 UXTQ9UBK9 157 aaPredicted RBP8.44□□□□□ -1.06
USP47-203ENST00000399455 PPP1R9AQ9ULJ8 1098 aa8.44□□□□□ -1.06
USP47-203ENST00000399455 NCKAP1Q9Y2A7 1128 aa8.44□□□□□ -1.06
USP47-203ENST00000399455 ALDH1A2O94788 518 aa8.44□□□□□ -1.06
USP47-203ENST00000399455 RWDD2BP57060 319 aa8.44□□□□□ -1.06
USP47-203ENST00000399455 IMPG1Q17R60 797 aa8.44□□□□□ -1.06
USP47-203ENST00000399455 RABGAP1LQ5R372 815 aa8.44□□□□□ -1.06
USP47-203ENST00000399455 FAM102AQ5T9C2 384 aaPredicted RBP8.44□□□□□ -1.06
USP47-203ENST00000399455 THEMIS2Q5TEJ8 643 aa8.44□□□□□ -1.06
USP47-203ENST00000399455 RESP18Q5W5W9 173 aa8.44□□□□□ -1.06
USP47-203ENST00000399455 TLK2Q86UE8 772 aa8.44□□□□□ -1.06
USP47-203ENST00000399455 MB21D2Q8IYB1 491 aaPredicted RBP8.44□□□□□ -1.06
USP47-203ENST00000399455 CACNA2D3Q8IZS8 1091 aa8.44□□□□□ -1.06
USP47-203ENST00000399455 DCLK2Q8N568 766 aa8.44□□□□□ -1.06
USP47-203ENST00000399455 AFAP1L1Q8TED9 768 aa8.44□□□□□ -1.06
USP47-203ENST00000399455 RIN2Q8WYP3 895 aaPredicted RBP8.44□□□□□ -1.06
USP47-203ENST00000399455 DDX27Q96GQ7 796 aaKnown RBP8.44□□□□□ -1.06
USP47-203ENST00000399455 SIK2Q9H0K1 926 aa8.44□□□□□ -1.06
USP47-203ENST00000399455 RWDD3Q9Y3V2 267 aa8.44□□□□□ -1.06
USP47-203ENST00000399455 SNX9Q9Y5X1 595 aa8.44□□□□□ -1.06
USP47-203ENST00000399455 H0Y626 953 aa8.44□□□□□ -1.06
USP47-203ENST00000399455 NPM3O75607 178 aaKnown RBP8.44□□□□□ -1.06
USP47-203ENST00000399455 ADORA2AP29274 412 aa8.44□□□□□ -1.06
USP47-203ENST00000399455 CTNNA1P35221 906 aaKnown RBP8.44□□□□□ -1.06
USP47-203ENST00000399455 NLRP11P59045 1033 aaKnown RBP8.44□□□□□ -1.06
USP47-203ENST00000399455 FSCN1Q16658 493 aaKnown RBP8.44□□□□□ -1.06
USP47-203ENST00000399455 SRBD1Q8N5C6 995 aaKnown RBP8.44□□□□□ -1.06
USP47-203ENST00000399455 PPHLN1Q8NEY8 458 aaKnown RBP8.44□□□□□ -1.06
USP47-203ENST00000399455 INTS2Q9H0H0 1204 aaKnown RBP8.44□□□□□ -1.06
USP47-203ENST00000399455 CALCOCO1Q9P1Z2 691 aa8.44□□□□□ -1.06
USP47-203ENST00000399455 ORC6Q9Y5N6 252 aa8.44□□□□□ -1.06
USP47-203ENST00000399455 ARHGAP10A1A4S6 786 aa8.44□□□□□ -1.06
USP47-203ENST00000399455 ZNF197O14709 1029 aa8.44□□□□□ -1.06
USP47-203ENST00000399455 APOL1O14791 398 aa8.44□□□□□ -1.06
USP47-203ENST00000399455 HEATR6Q6AI08 1181 aaKnown RBP8.44□□□□□ -1.06
USP47-203ENST00000399455 IQSEC1Q6DN90 963 aa8.44□□□□□ -1.06
USP47-203ENST00000399455 ABHD16BQ9H3Z7 469 aa8.44□□□□□ -1.06
USP47-203ENST00000399455 CEP72Q9P209 647 aa8.44□□□□□ -1.06
USP47-203ENST00000399455 ZNF609O15014 1411 aa8.44□□□□□ -1.06
USP47-203ENST00000399455 SLC15A5A6NIM6 579 aa8.43□□□□□ -1.06
USP47-203ENST00000399455 AVPR1AP37288 418 aa8.43□□□□□ -1.06
USP47-203ENST00000399455 OXCT1P55809 520 aa8.43□□□□□ -1.06
USP47-203ENST00000399455 SLC12A1Q13621 1099 aa8.43□□□□□ -1.06
USP47-203ENST00000399455 FKBP1CQ5VVH2 108 aa8.43□□□□□ -1.06
USP47-203ENST00000399455 TRMT2AQ8IZ69 625 aaKnown RBP8.43□□□□□ -1.06
USP47-203ENST00000399455 ATPAF2Q8N5M1 289 aa8.43□□□□□ -1.06
USP47-203ENST00000399455 APBA2Q99767 749 aa8.43□□□□□ -1.06
USP47-203ENST00000399455 CPVLQ9H3G5 476 aa8.43□□□□□ -1.06
USP47-203ENST00000399455 NDST4Q9H3R1 872 aa8.43□□□□□ -1.06
USP47-203ENST00000399455 MEGF6O75095 1541 aa8.43□□□□□ -1.06
USP47-203ENST00000399455 CASQ2O14958 399 aaPredicted RBP8.43□□□□□ -1.06
USP47-203ENST00000399455 PSMD6Q15008 389 aa8.43□□□□□ -1.06
USP47-203ENST00000399455 TBCCQ15814 346 aa8.43□□□□□ -1.06
USP47-203ENST00000399455 CTXN3Q4LDR2 81 aa8.43□□□□□ -1.06
USP47-203ENST00000399455 CAPN12Q6ZSI9 719 aa8.43□□□□□ -1.06
USP47-203ENST00000399455 TRIM67Q6ZTA4 783 aa8.43□□□□□ -1.06
USP47-203ENST00000399455 B4GALNT4Q76KP1 1039 aa8.43□□□□□ -1.06
USP47-203ENST00000399455 PASD1Q8IV76 773 aa8.43□□□□□ -1.06
USP47-203ENST00000399455 MRFAP1L1Q96HT8 127 aa8.43□□□□□ -1.06
USP47-203ENST00000399455 XPO6Q96QU8 1125 aaKnown RBP8.43□□□□□ -1.06
USP47-203ENST00000399455 C17orf75Q9HAS0 396 aa8.43□□□□□ -1.06
USP47-203ENST00000399455 SCUBE2Q9NQ36 999 aa8.43□□□□□ -1.06
USP47-203ENST00000399455 FANCLQ9NW38 375 aa8.43□□□□□ -1.06
USP47-203ENST00000399455 FAM95CA0A1B0GW59 222 aa8.43□□□□□ -1.06
USP47-203ENST00000399455 EXTL3O43909 919 aa8.43□□□□□ -1.06
USP47-203ENST00000399455 PGK2P07205 417 aa8.43□□□□□ -1.06
USP47-203ENST00000399455 HMBSP08397 361 aa8.43□□□□□ -1.06
USP47-203ENST00000399455 GNL1P36915 607 aaPredicted RBP8.43□□□□□ -1.06
USP47-203ENST00000399455 POLD3Q15054 466 aaPredicted RBP8.43□□□□□ -1.06
USP47-203ENST00000399455 PDIA6Q15084 440 aa8.43□□□□□ -1.06
USP47-203ENST00000399455 SLAIN1Q8ND83 568 aa8.43□□□□□ -1.06
USP47-203ENST00000399455 STK39Q9UEW8 545 aa8.43□□□□□ -1.06
USP47-203ENST00000399455 FAM200BP0CF97 657 aa8.43□□□□□ -1.06
USP47-203ENST00000399455 AXLP30530 894 aa8.43□□□□□ -1.06
USP47-203ENST00000399455 CTCFP49711 727 aaPredicted RBP8.43□□□□□ -1.06
USP47-203ENST00000399455 ACTR2P61160 394 aa8.43□□□□□ -1.06
USP47-203ENST00000399455 ACBD5Q5T8D3 534 aaPredicted RBP8.43□□□□□ -1.06
USP47-203ENST00000399455 TAF2Q6P1X5 1199 aa8.43□□□□□ -1.06
USP47-203ENST00000399455 PHLDB2Q86SQ0 1253 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms