RNA–Protein interactions for RNA: ENST00000399349.5

ITSN1-208, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,191 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-208ENST00000399349 ZBED2Q9BTP6 218 aa13.94□□□□□ -0.18
ITSN1-208ENST00000399349 ALDH8A1Q9H2A2 487 aaPredicted RBP13.94□□□□□ -0.18
ITSN1-208ENST00000399349 ECT2Q9H8V3 914 aa13.94□□□□□ -0.18
ITSN1-208ENST00000399349 AFF4Q9UHB7 1163 aaKnown RBP13.94□□□□□ -0.18
ITSN1-208ENST00000399349 SLC13A4Q9UKG4 626 aa13.94□□□□□ -0.18
ITSN1-208ENST00000399349 FAM187AA6NFU0 413 aa13.94□□□□□ -0.18
ITSN1-208ENST00000399349 TCP11X1B4DZS4 312 aa13.94□□□□□ -0.18
ITSN1-208ENST00000399349 ANP32DO95626 131 aa13.94□□□□□ -0.18
ITSN1-208ENST00000399349 UCHL3P15374 230 aa13.94□□□□□ -0.18
ITSN1-208ENST00000399349 RECQLP46063 649 aaPredicted RBP13.94□□□□□ -0.18
ITSN1-208ENST00000399349 DPYDQ12882 1025 aa13.94□□□□□ -0.18
ITSN1-208ENST00000399349 MXD4Q14582 209 aaPredicted RBP13.94□□□□□ -0.18
ITSN1-208ENST00000399349 EFHC2Q5JST6 749 aa13.94□□□□□ -0.18
ITSN1-208ENST00000399349 GIMAP8Q8ND71 665 aaPredicted RBP13.94□□□□□ -0.18
ITSN1-208ENST00000399349 SNX19Q92543 992 aa13.94□□□□□ -0.18
ITSN1-208ENST00000399349 RAPGEF5Q92565 580 aa13.94□□□□□ -0.18
ITSN1-208ENST00000399349 STOML1Q9UBI4 398 aa13.94□□□□□ -0.18
ITSN1-208ENST00000399349 SUFUQ9UMX1 484 aa13.94□□□□□ -0.18
ITSN1-208ENST00000399349 NDUFB10O96000 172 aa13.94□□□□□ -0.18
ITSN1-208ENST00000399349 MTMR2Q13614 643 aa13.94□□□□□ -0.18
ITSN1-208ENST00000399349 COBLL1Q53SF7 1204 aa13.94□□□□□ -0.18
ITSN1-208ENST00000399349 SLC26A7Q8TE54 656 aa13.94□□□□□ -0.18
ITSN1-208ENST00000399349 CCDC90BQ9GZT6 254 aa13.94□□□□□ -0.18
ITSN1-208ENST00000399349 ING2Q9H160 280 aa13.94□□□□□ -0.18
ITSN1-208ENST00000399349 HSPBP1Q9NZL4 362 aa13.94□□□□□ -0.18
ITSN1-208ENST00000399349 SLC8A2Q9UPR5 921 aa13.94□□□□□ -0.18
ITSN1-208ENST00000399349 ZBTB12Q9Y330 459 aaPredicted RBP13.94□□□□□ -0.18
ITSN1-208ENST00000399349 MYBP10242 640 aa13.94□□□□□ -0.18
ITSN1-208ENST00000399349 FDPSP14324 419 aaKnown RBP13.94□□□□□ -0.18
ITSN1-208ENST00000399349 H2AFXP16104 143 aaPredicted RBP13.94□□□□□ -0.18
ITSN1-208ENST00000399349 ACTR2P61160 394 aa13.94□□□□□ -0.18
ITSN1-208ENST00000399349 ZNF543Q08ER8 600 aa13.94□□□□□ -0.18
ITSN1-208ENST00000399349 TTC8Q8TAM2 541 aa13.94□□□□□ -0.18
ITSN1-208ENST00000399349 KIF1BO60333 1816 aa13.93□□□□□ -0.18
ITSN1-208ENST00000399349 MYO3BQ8WXR4 1341 aa13.93□□□□□ -0.18
ITSN1-208ENST00000399349 NEMP1O14524 444 aa13.93□□□□□ -0.18
ITSN1-208ENST00000399349 APRTP07741 180 aa13.93□□□□□ -0.18
ITSN1-208ENST00000399349 EIF3EP60228 445 aaKnown RBP13.93□□□□□ -0.18
ITSN1-208ENST00000399349 BAATQ14032 418 aaPredicted RBP13.93□□□□□ -0.18
ITSN1-208ENST00000399349 LONRF1Q17RB8 773 aa13.93□□□□□ -0.18
ITSN1-208ENST00000399349 DDX42Q86XP3 938 aaKnown RBP eCLIP13.93□□□□□ -0.18
ITSN1-208ENST00000399349 TSC22D3Q99576 134 aa13.93□□□□□ -0.18
ITSN1-208ENST00000399349 MARCOQ9UEW3 520 aaPredicted RBP13.93□□□□□ -0.18
ITSN1-208ENST00000399349 DBR1Q9UK59 544 aaKnown RBP13.93□□□□□ -0.18
ITSN1-208ENST00000399349 ATMINO43313 823 aaPredicted RBP13.93□□□□□ -0.18
ITSN1-208ENST00000399349 GRAP2O75791 330 aa13.93□□□□□ -0.18
ITSN1-208ENST00000399349 ARHGDIAP52565 204 aa13.93□□□□□ -0.18
ITSN1-208ENST00000399349 KDSRQ06136 332 aa13.93□□□□□ -0.18
ITSN1-208ENST00000399349 TRIM28Q13263 835 aaKnown RBP13.93□□□□□ -0.18
ITSN1-208ENST00000399349 PDIA5Q14554 519 aa13.93□□□□□ -0.18
ITSN1-208ENST00000399349 HIF1AQ16665 826 aa13.93□□□□□ -0.18
ITSN1-208ENST00000399349 EPC2Q52LR7 807 aa13.93□□□□□ -0.18
ITSN1-208ENST00000399349 C4orf33Q8N1A6 199 aa13.93□□□□□ -0.18
ITSN1-208ENST00000399349 TC2NQ8N9U0 490 aa13.93□□□□□ -0.18
ITSN1-208ENST00000399349 GCNAQ96QF7 691 aa13.93□□□□□ -0.18
ITSN1-208ENST00000399349 PRMT1Q99873 361 aaKnown RBP13.93□□□□□ -0.18
ITSN1-208ENST00000399349 EGFL8Q99944 293 aa13.93□□□□□ -0.18
ITSN1-208ENST00000399349 JPH1Q9HDC5 661 aaPredicted RBP13.93□□□□□ -0.18
ITSN1-208ENST00000399349 PARVAQ9NVD7 372 aa13.93□□□□□ -0.18
ITSN1-208ENST00000399349 FLT1P17948 1338 aa13.93□□□□□ -0.18
ITSN1-208ENST00000399349 PPARGP37231 505 aaPredicted RBP13.93□□□□□ -0.18
ITSN1-208ENST00000399349 STAT5BP51692 787 aa13.93□□□□□ -0.18
ITSN1-208ENST00000399349 ORC2Q13416 577 aaPredicted RBP13.93□□□□□ -0.18
ITSN1-208ENST00000399349 LBRQ14739 615 aaKnown RBP13.93□□□□□ -0.18
ITSN1-208ENST00000399349 IMPG1Q17R60 797 aa13.93□□□□□ -0.18
ITSN1-208ENST00000399349 DCAF4L1Q3SXM0 396 aa13.93□□□□□ -0.18
ITSN1-208ENST00000399349 KIAA1755Q5JYT7 1200 aa13.93□□□□□ -0.18
ITSN1-208ENST00000399349 PRAMEF18Q5VWM3 479 aa13.93□□□□□ -0.18
ITSN1-208ENST00000399349 RNF219Q5W0B1 726 aaPredicted RBP13.93□□□□□ -0.18
ITSN1-208ENST00000399349 TMEM117Q9H0C3 514 aa13.93□□□□□ -0.18
ITSN1-208ENST00000399349 C2orf40Q9H1Z8 148 aa13.93□□□□□ -0.18
ITSN1-208ENST00000399349 EPB41L4AQ9HCS5 686 aaPredicted RBP13.93□□□□□ -0.18
ITSN1-208ENST00000399349 RBM12Q9NTZ6 932 aaKnown RBP13.93□□□□□ -0.18
ITSN1-208ENST00000399349 ZFATQ9P243 1243 aa13.93□□□□□ -0.18
ITSN1-208ENST00000399349 E5RI56 91 aa13.93□□□□□ -0.18
ITSN1-208ENST00000399349 UBE2Q2LH0YL09 131 aa13.93□□□□□ -0.18
ITSN1-208ENST00000399349 ESRRBO95718 433 aa13.93□□□□□ -0.18
ITSN1-208ENST00000399349 SRGNP10124 158 aa13.93□□□□□ -0.18
ITSN1-208ENST00000399349 TBC1D16Q8TBP0 767 aa13.93□□□□□ -0.18
ITSN1-208ENST00000399349 POLR3CQ9BUI4 534 aaPredicted RBP13.93□□□□□ -0.18
ITSN1-208ENST00000399349 SNX9Q9Y5X1 595 aa13.93□□□□□ -0.18
ITSN1-208ENST00000399349 DFFAO00273 331 aa13.92□□□□□ -0.18
ITSN1-208ENST00000399349 KCNJ1P48048 391 aa13.92□□□□□ -0.18
ITSN1-208ENST00000399349 PLA2G4FQ68DD2 849 aa13.92□□□□□ -0.18
ITSN1-208ENST00000399349 ZNF507Q8TCN5 953 aa13.92□□□□□ -0.18
ITSN1-208ENST00000399349 MAP3K4Q9Y6R4 1608 aa13.92□□□□□ -0.18
ITSN1-208ENST00000399349 PPP1R37O75864 691 aa13.92□□□□□ -0.18
ITSN1-208ENST00000399349 RAD23BP54727 409 aa13.92□□□□□ -0.18
ITSN1-208ENST00000399349 ARHGEF6Q15052 776 aa13.92□□□□□ -0.18
ITSN1-208ENST00000399349 ACCSLQ4AC99 568 aa13.92□□□□□ -0.18
ITSN1-208ENST00000399349 RABGAP1LQ5R372 815 aa13.92□□□□□ -0.18
ITSN1-208ENST00000399349 RASSF3Q86WH2 238 aa13.92□□□□□ -0.18
ITSN1-208ENST00000399349 NRBF2Q96F24 287 aa13.92□□□□□ -0.18
ITSN1-208ENST00000399349 APEX2Q9UBZ4 518 aa13.92□□□□□ -0.18
ITSN1-208ENST00000399349 AGAP1Q9UPQ3 857 aa13.92□□□□□ -0.18
ITSN1-208ENST00000399349 AFF2P51816 1311 aa13.92□□□□□ -0.18
ITSN1-208ENST00000399349 PHF20L1A8MW92 1017 aa13.92□□□□□ -0.18
ITSN1-208ENST00000399349 KCNN4O15554 427 aa13.92□□□□□ -0.18
ITSN1-208ENST00000399349 RARBP10826 455 aa13.92□□□□□ -0.18
ITSN1-208ENST00000399349 GNAT1P11488 350 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms