RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 CPA5Q8WXQ8 436 aa20.94■□□□□ 0.94
COL13A1-205ENST00000398978 ZNF70Q9UC06 446 aaPredicted RBP20.94■□□□□ 0.94
COL13A1-205ENST00000398978 ASIC3Q9UHC3 531 aa20.94■□□□□ 0.94
COL13A1-205ENST00000398978 PCYOX1Q9UHG3 505 aa20.94■□□□□ 0.94
COL13A1-205ENST00000398978 ONECUT3O60422 494 aaPredicted RBP20.94■□□□□ 0.94
COL13A1-205ENST00000398978 QARSP47897 775 aaKnown RBP20.94■□□□□ 0.94
COL13A1-205ENST00000398978 AUHQ13825 339 aaKnown RBP20.94■□□□□ 0.94
COL13A1-205ENST00000398978 CCT6BQ92526 530 aa20.94■□□□□ 0.94
COL13A1-205ENST00000398978 TAAR1Q96RJ0 339 aa20.94■□□□□ 0.94
COL13A1-205ENST00000398978 KCND2Q9NZV8 630 aa20.94■□□□□ 0.94
COL13A1-205ENST00000398978 SPDYE2BA6NHP3 402 aa20.93■□□□□ 0.94
COL13A1-205ENST00000398978 SPDYE6P0CI01 402 aa20.93■□□□□ 0.94
COL13A1-205ENST00000398978 CDR1P51861 262 aa20.93■□□□□ 0.94
COL13A1-205ENST00000398978 E2F5Q15329 346 aa20.93■□□□□ 0.94
COL13A1-205ENST00000398978 FUKQ8N0W3 1084 aa20.93■□□□□ 0.94
COL13A1-205ENST00000398978 CEP89Q96ST8 783 aa20.93■□□□□ 0.94
COL13A1-205ENST00000398978 ZNF341Q9BYN7 854 aa20.93■□□□□ 0.94
COL13A1-205ENST00000398978 CDC42EP4Q9H3Q1 356 aaKnown RBP20.93■□□□□ 0.94
COL13A1-205ENST00000398978 CNOT10Q9H9A5 744 aaKnown RBP20.93■□□□□ 0.94
COL13A1-205ENST00000398978 TBK1Q9UHD2 729 aa20.93■□□□□ 0.94
COL13A1-205ENST00000398978 ANAPC7Q9UJX3 599 aa20.93■□□□□ 0.94
COL13A1-205ENST00000398978 KRT17Q04695 432 aa20.93■□□□□ 0.94
COL13A1-205ENST00000398978 MTMR1Q13613 665 aa20.93■□□□□ 0.94
COL13A1-205ENST00000398978 CYB5D1Q6P9G0 228 aa20.93■□□□□ 0.94
COL13A1-205ENST00000398978 CCDC197Q8NCU1 140 aa20.93■□□□□ 0.94
COL13A1-205ENST00000398978 HERC5Q9UII4 1024 aaKnown RBP20.93■□□□□ 0.94
COL13A1-205ENST00000398978 PCNTO95613 3336 aa20.93■□□□□ 0.94
COL13A1-205ENST00000398978 ZNF536O15090 1300 aa20.93■□□□□ 0.94
COL13A1-205ENST00000398978 ASTN2O75129 1339 aaPredicted RBP20.93■□□□□ 0.94
COL13A1-205ENST00000398978 CAP2P40123 477 aa20.93■□□□□ 0.94
COL13A1-205ENST00000398978 SGO2Q562F6 1265 aa20.93■□□□□ 0.94
COL13A1-205ENST00000398978 ZKSCAN4Q969J2 545 aaPredicted RBP20.93■□□□□ 0.94
COL13A1-205ENST00000398978 RIT2Q99578 217 aa20.93■□□□□ 0.94
COL13A1-205ENST00000398978 AGO4Q9HCK5 861 aaKnown RBP20.93■□□□□ 0.94
COL13A1-205ENST00000398978 PFASO15067 1338 aa20.92■□□□□ 0.94
COL13A1-205ENST00000398978 SRRM3A6NNA2 597 aaPredicted RBP20.92■□□□□ 0.94
COL13A1-205ENST00000398978 PPP2R5EQ16537 467 aa20.92■□□□□ 0.94
COL13A1-205ENST00000398978 GDAP1Q8TB36 358 aa20.92■□□□□ 0.94
COL13A1-205ENST00000398978 BSNDQ8WZ55 320 aa20.92■□□□□ 0.94
COL13A1-205ENST00000398978 WNT8AQ9H1J5 351 aa20.92■□□□□ 0.94
COL13A1-205ENST00000398978 TESPA1A2RU30 521 aaPredicted RBP20.92■□□□□ 0.94
COL13A1-205ENST00000398978 DLGAP5Q15398 846 aa20.92■□□□□ 0.94
COL13A1-205ENST00000398978 EXOC3L1Q86VI1 746 aa20.92■□□□□ 0.94
COL13A1-205ENST00000398978 FAM228AQ86W67 206 aa20.92■□□□□ 0.94
COL13A1-205ENST00000398978 HELQQ8TDG4 1101 aa20.92■□□□□ 0.94
COL13A1-205ENST00000398978 PGM2Q96G03 612 aa20.92■□□□□ 0.94
COL13A1-205ENST00000398978 RPS6KC1Q96S38 1066 aa20.92■□□□□ 0.94
COL13A1-205ENST00000398978 AAASQ9NRG9 546 aa20.92■□□□□ 0.94
COL13A1-205ENST00000398978 MTUS1Q9ULD2 1270 aa20.92■□□□□ 0.94
COL13A1-205ENST00000398978 DENND3A2RUS2 1198 aa20.91■□□□□ 0.94
COL13A1-205ENST00000398978 PODXLO00592 558 aa20.91■□□□□ 0.94
COL13A1-205ENST00000398978 NPM3O75607 178 aaKnown RBP20.91■□□□□ 0.94
COL13A1-205ENST00000398978 GJB6O95452 261 aa20.91■□□□□ 0.94
COL13A1-205ENST00000398978 ECEL1O95672 775 aa20.91■□□□□ 0.94
COL13A1-205ENST00000398978 CNGA1P29973 690 aa20.91■□□□□ 0.94
COL13A1-205ENST00000398978 PDE6CP51160 858 aa20.91■□□□□ 0.94
COL13A1-205ENST00000398978 RWDD2BP57060 319 aa20.91■□□□□ 0.94
COL13A1-205ENST00000398978 PASD1Q8IV76 773 aa20.91■□□□□ 0.94
COL13A1-205ENST00000398978 DYDC1Q8WWB3 177 aa20.91■□□□□ 0.94
COL13A1-205ENST00000398978 TCEAL9Q9UHQ7 104 aa20.91■□□□□ 0.94
COL13A1-205ENST00000398978 R3HDM2Q9Y2K5 976 aaKnown RBP20.91■□□□□ 0.94
COL13A1-205ENST00000398978 SPATA31A6Q5VVP1 1343 aa20.91■□□□□ 0.94
COL13A1-205ENST00000398978 TP73O15350 636 aa20.91■□□□□ 0.94
COL13A1-205ENST00000398978 DRG2P55039 364 aaKnown RBP20.91■□□□□ 0.94
COL13A1-205ENST00000398978 MFAP3P55082 362 aa20.91■□□□□ 0.94
COL13A1-205ENST00000398978 KYNUQ16719 465 aa20.91■□□□□ 0.94
COL13A1-205ENST00000398978 SHC3Q92529 594 aa20.91■□□□□ 0.94
COL13A1-205ENST00000398978 ART4Q93070 314 aa20.91■□□□□ 0.94
COL13A1-205ENST00000398978 KCNK9Q9NPC2 374 aa20.91■□□□□ 0.94
COL13A1-205ENST00000398978 ABCF3Q9NUQ8 709 aa20.91■□□□□ 0.94
COL13A1-205ENST00000398978 GGA2Q9UJY4 613 aa20.91■□□□□ 0.94
COL13A1-205ENST00000398978 PASKQ96RG2 1323 aa20.91■□□□□ 0.94
COL13A1-205ENST00000398978 CCNE2O96020 404 aa20.91■□□□□ 0.94
COL13A1-205ENST00000398978 CFHP08603 1231 aa20.91■□□□□ 0.94
COL13A1-205ENST00000398978 GTF2BQ00403 316 aa20.91■□□□□ 0.94
COL13A1-205ENST00000398978 CALCOCO2Q13137 446 aa20.91■□□□□ 0.94
COL13A1-205ENST00000398978 ZKSCAN8Q15776 578 aaPredicted RBP20.91■□□□□ 0.94
COL13A1-205ENST00000398978 C6orf118Q5T5N4 469 aa20.91■□□□□ 0.94
COL13A1-205ENST00000398978 PARD3BQ8TEW8 1205 aa20.91■□□□□ 0.94
COL13A1-205ENST00000398978 CLEC4DQ8WXI8 215 aa20.91■□□□□ 0.94
COL13A1-205ENST00000398978 KLHL11Q9NVR0 708 aa20.91■□□□□ 0.94
COL13A1-205ENST00000398978 TPX2Q9ULW0 747 aaKnown RBP20.91■□□□□ 0.94
COL13A1-205ENST00000398978 CCT8L1PA6NM43 557 aa20.9■□□□□ 0.94
COL13A1-205ENST00000398978 APBA3O96018 575 aa20.9■□□□□ 0.94
COL13A1-205ENST00000398978 GH1P01241 217 aa20.9■□□□□ 0.94
COL13A1-205ENST00000398978 RFX1P22670 979 aa20.9■□□□□ 0.94
COL13A1-205ENST00000398978 HADHBP55084 474 aaKnown RBP20.9■□□□□ 0.94
COL13A1-205ENST00000398978 SPOPLQ6IQ16 392 aa20.9■□□□□ 0.94
COL13A1-205ENST00000398978 HIBCHQ6NVY1 386 aaPredicted RBP20.9■□□□□ 0.94
COL13A1-205ENST00000398978 KCTD17Q8N5Z5 321 aa20.9■□□□□ 0.94
COL13A1-205ENST00000398978 POMGNT1Q8WZA1 660 aa20.9■□□□□ 0.94
COL13A1-205ENST00000398978 CNTNAP1P78357 1384 aa20.9■□□□□ 0.94
COL13A1-205ENST00000398978 MAPK4P31152 587 aa20.9■□□□□ 0.94
COL13A1-205ENST00000398978 NPTX2P47972 431 aa20.9■□□□□ 0.94
COL13A1-205ENST00000398978 ADCY2Q08462 1091 aa20.9■□□□□ 0.94
COL13A1-205ENST00000398978 KRT39Q6A163 491 aa20.9■□□□□ 0.94
COL13A1-205ENST00000398978 PARP9Q8IXQ6 854 aa20.9■□□□□ 0.94
COL13A1-205ENST00000398978 ACTR5Q9H9F9 607 aaPredicted RBP20.9■□□□□ 0.94
COL13A1-205ENST00000398978 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.9■□□□□ 0.94
COL13A1-205ENST00000398978 TBX20Q9UMR3 447 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms