RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 MTHFD2P13995 350 aa3.65□□□□□ -1.83
CD47-203ENST00000398258 BCAR1P56945 870 aa3.65□□□□□ -1.83
CD47-203ENST00000398258 ATP2C1P98194 919 aaPredicted RBP3.65□□□□□ -1.83
CD47-203ENST00000398258 U2AF1Q01081 240 aaKnown RBP eCLIP3.65□□□□□ -1.83
CD47-203ENST00000398258 ROM1Q03395 351 aa3.65□□□□□ -1.83
CD47-203ENST00000398258 HLTFQ14527 1009 aaKnown RBP eCLIP3.65□□□□□ -1.83
CD47-203ENST00000398258 ODF1Q14990 250 aa3.65□□□□□ -1.83
CD47-203ENST00000398258 PITRM1Q5JRX3 1037 aa3.65□□□□□ -1.83
CD47-203ENST00000398258 GRAMD4Q6IC98 578 aa3.65□□□□□ -1.83
CD47-203ENST00000398258 SLFN12LQ6IEE8 588 aa3.65□□□□□ -1.83
CD47-203ENST00000398258 TIGD7Q6NT04 549 aaPredicted RBP3.65□□□□□ -1.83
CD47-203ENST00000398258 PGM2L1Q6PCE3 622 aa3.65□□□□□ -1.83
CD47-203ENST00000398258 KRTAP5-2Q701N4 177 aa3.65□□□□□ -1.83
CD47-203ENST00000398258 HTR3DQ70Z44 454 aa3.65□□□□□ -1.83
CD47-203ENST00000398258 NOL8Q76FK4 1167 aaKnown RBP3.65□□□□□ -1.83
CD47-203ENST00000398258 CXXC5Q7LFL8 322 aaKnown RBP3.65□□□□□ -1.83
CD47-203ENST00000398258 RTKN2Q8IZC4 609 aa3.65□□□□□ -1.83
CD47-203ENST00000398258 MAGEB6Q8N7X4 407 aa3.65□□□□□ -1.83
CD47-203ENST00000398258 FAM98AQ8NCA5 519 aaKnown RBP3.65□□□□□ -1.83
CD47-203ENST00000398258 JPH3Q8WXH2 748 aaPredicted RBP3.65□□□□□ -1.83
CD47-203ENST00000398258 AIFM3Q96NN9 605 aa3.65□□□□□ -1.83
CD47-203ENST00000398258 TUBGCP5Q96RT8 1024 aa3.65□□□□□ -1.83
CD47-203ENST00000398258 MYL10Q9BUA6 226 aa3.65□□□□□ -1.83
CD47-203ENST00000398258 POFUT1Q9H488 388 aa3.65□□□□□ -1.83
CD47-203ENST00000398258 MKS1Q9NXB0 559 aa3.65□□□□□ -1.83
CD47-203ENST00000398258 Q9UFV3 132 aa3.65□□□□□ -1.83
CD47-203ENST00000398258 TESQ9UGI8 421 aaKnown RBP3.65□□□□□ -1.83
CD47-203ENST00000398258 KCNG1Q9UIX4 513 aa3.65□□□□□ -1.83
CD47-203ENST00000398258 ZNF180Q9UJW8 692 aa3.65□□□□□ -1.83
CD47-203ENST00000398258 FBXO10Q9UK96 956 aa3.65□□□□□ -1.83
CD47-203ENST00000398258 FAM184BQ9ULE4 1060 aa3.65□□□□□ -1.83
CD47-203ENST00000398258 FZD1Q9UP38 647 aa3.65□□□□□ -1.83
CD47-203ENST00000398258 FRMD4BQ9Y2L6 1034 aa3.65□□□□□ -1.83
CD47-203ENST00000398258 LUC7L2Q9Y383 392 aaKnown RBP3.65□□□□□ -1.83
CD47-203ENST00000398258 CTDP1Q9Y5B0 961 aaPredicted RBP3.65□□□□□ -1.83
CD47-203ENST00000398258 GPR45Q9Y5Y3 372 aa3.65□□□□□ -1.83
CD47-203ENST00000398258 MRFAP1Q9Y605 127 aa3.65□□□□□ -1.83
CD47-203ENST00000398258 A0A0A6YYJ9 748 aa3.64□□□□□ -1.83
CD47-203ENST00000398258 A0A1W2PRX2 142 aa3.64□□□□□ -1.83
CD47-203ENST00000398258 ABHD16AO95870 558 aa3.64□□□□□ -1.83
CD47-203ENST00000398258 ITGB1P05556 798 aa3.64□□□□□ -1.83
CD47-203ENST00000398258 TYRP1P17643 537 aa3.64□□□□□ -1.83
CD47-203ENST00000398258 VCAM1P19320 739 aa3.64□□□□□ -1.83
CD47-203ENST00000398258 APEX1P27695 318 aaKnown RBP3.64□□□□□ -1.83
CD47-203ENST00000398258 WASP42768 502 aa3.64□□□□□ -1.83
CD47-203ENST00000398258 GPR15P49685 360 aa3.64□□□□□ -1.83
CD47-203ENST00000398258 MEOX1P50221 254 aa3.64□□□□□ -1.83
CD47-203ENST00000398258 TBX4P57082 545 aa3.64□□□□□ -1.83
CD47-203ENST00000398258 ADCY2Q08462 1091 aa3.64□□□□□ -1.83
CD47-203ENST00000398258 ADAM15Q13444 863 aa3.64□□□□□ -1.83
CD47-203ENST00000398258 GTF2H3Q13889 308 aa3.64□□□□□ -1.83
CD47-203ENST00000398258 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.64□□□□□ -1.83
CD47-203ENST00000398258 MUM1Q2TAK8 710 aa3.64□□□□□ -1.83
CD47-203ENST00000398258 ANO4Q32M45 955 aa3.64□□□□□ -1.83
CD47-203ENST00000398258 CCDC178Q5BJE1 867 aa3.64□□□□□ -1.83
CD47-203ENST00000398258 STRIP1Q5VSL9 837 aa3.64□□□□□ -1.83
CD47-203ENST00000398258 Q6YL49 198 aa3.64□□□□□ -1.83
CD47-203ENST00000398258 LRRC55Q6ZSA7 311 aa3.64□□□□□ -1.83
CD47-203ENST00000398258 AMOTL1Q8IY63 956 aa3.64□□□□□ -1.83
CD47-203ENST00000398258 MYO1HQ8N1T3 1032 aa3.64□□□□□ -1.83
CD47-203ENST00000398258 TTC8Q8TAM2 541 aa3.64□□□□□ -1.83
CD47-203ENST00000398258 JADE3Q92613 823 aa3.64□□□□□ -1.83
CD47-203ENST00000398258 RABGGTAQ92696 567 aa3.64□□□□□ -1.83
CD47-203ENST00000398258 TEKT5Q96M29 485 aa3.64□□□□□ -1.83
CD47-203ENST00000398258 PRDM12Q9H4Q4 367 aa3.64□□□□□ -1.83
CD47-203ENST00000398258 ALG13Q9NP73 1137 aaKnown RBP3.64□□□□□ -1.83
CD47-203ENST00000398258 LPXNO60711 386 aa3.63□□□□□ -1.83
CD47-203ENST00000398258 LPOP22079 712 aaPredicted RBP3.63□□□□□ -1.83
CD47-203ENST00000398258 AKAP5P24588 427 aa3.63□□□□□ -1.83
CD47-203ENST00000398258 CYP2C19P33261 490 aa3.63□□□□□ -1.83
CD47-203ENST00000398258 ADCY7P51828 1080 aa3.63□□□□□ -1.83
CD47-203ENST00000398258 ADKP55263 362 aaKnown RBP3.63□□□□□ -1.83
CD47-203ENST00000398258 ELAVL1Q15717 326 aaKnown RBP3.63□□□□□ -1.83
CD47-203ENST00000398258 UGT8Q16880 541 aa3.63□□□□□ -1.83
CD47-203ENST00000398258 CCSAPQ6IQ19 270 aaPredicted RBP3.63□□□□□ -1.83
CD47-203ENST00000398258 FBXO42Q6P3S6 717 aa3.63□□□□□ -1.83
CD47-203ENST00000398258 UNQ6494/PRO21346Q6UXR6 183 aa3.63□□□□□ -1.83
CD47-203ENST00000398258 EPM2AIP1Q7L775 607 aaPredicted RBP3.63□□□□□ -1.83
CD47-203ENST00000398258 BMP8AQ7Z5Y6 402 aa3.63□□□□□ -1.83
CD47-203ENST00000398258 ELOA2Q8IYF1 753 aaPredicted RBP3.63□□□□□ -1.83
CD47-203ENST00000398258 OR5AN1Q8NGI8 311 aa3.63□□□□□ -1.83
CD47-203ENST00000398258 PPP1R14CQ8TAE6 165 aa3.63□□□□□ -1.83
CD47-203ENST00000398258 TSPEARQ8WU66 669 aa3.63□□□□□ -1.83
CD47-203ENST00000398258 EAF2Q96CJ1 260 aaPredicted RBP3.63□□□□□ -1.83
CD47-203ENST00000398258 ANO3Q9BYT9 981 aa3.63□□□□□ -1.83
CD47-203ENST00000398258 ZNF768Q9H5H4 540 aaKnown RBP3.63□□□□□ -1.83
CD47-203ENST00000398258 DNAJC28Q9NX36 388 aa3.63□□□□□ -1.83
CD47-203ENST00000398258 KCMF1Q9P0J7 381 aa3.63□□□□□ -1.83
CD47-203ENST00000398258 RNF7Q9UBF6 113 aa3.63□□□□□ -1.83
CD47-203ENST00000398258 IP6K2Q9UHH9 426 aa3.63□□□□□ -1.83
CD47-203ENST00000398258 PRSS50Q9UI38 385 aa3.63□□□□□ -1.83
CD47-203ENST00000398258 MYPNQ86TC9 1320 aa3.63□□□□□ -1.83
CD47-203ENST00000398258 CENPVL1A0A0U1RR11 272 aa3.62□□□□□ -1.83
CD47-203ENST00000398258 MAFGO15525 162 aa3.62□□□□□ -1.83
CD47-203ENST00000398258 PRPF3O43395 683 aaKnown RBP3.62□□□□□ -1.83
CD47-203ENST00000398258 PRC1O43663 620 aa3.62□□□□□ -1.83
CD47-203ENST00000398258 B3GALT2O43825 422 aa3.62□□□□□ -1.83
CD47-203ENST00000398258 OPHN1O60890 802 aa3.62□□□□□ -1.83
CD47-203ENST00000398258 PF4V1P10720 104 aa3.62□□□□□ -1.83
CD47-203ENST00000398258 C5AR1P21730 350 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms