RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 OR6B2Q6IFH4 312 aa11.74□□□□□ -0.53
HPS4-202ENST00000398145 MSTO1Q9BUK6 570 aa11.74□□□□□ -0.53
HPS4-202ENST00000398145 RANBP17Q9H2T7 1088 aaKnown RBP11.74□□□□□ -0.53
HPS4-202ENST00000398145 FAM205AQ6ZU69 1335 aa11.73□□□□□ -0.53
HPS4-202ENST00000398145 COL15A1P39059 1388 aa11.73□□□□□ -0.53
HPS4-202ENST00000398145 ATP6V1G2O95670 118 aa11.73□□□□□ -0.53
HPS4-202ENST00000398145 MAGEA4P43358 317 aa11.73□□□□□ -0.53
HPS4-202ENST00000398145 ITGA8P53708 1063 aa11.73□□□□□ -0.53
HPS4-202ENST00000398145 SF3B3Q15393 1217 aaKnown RBP11.73□□□□□ -0.53
HPS4-202ENST00000398145 SWT1Q5T5J6 900 aaKnown RBP11.73□□□□□ -0.53
HPS4-202ENST00000398145 GJB7Q6PEY0 223 aa11.73□□□□□ -0.53
HPS4-202ENST00000398145 FAM196AQ6ZSG2 479 aa11.73□□□□□ -0.53
HPS4-202ENST00000398145 KIRREL3Q8IZU9 778 aa11.73□□□□□ -0.53
HPS4-202ENST00000398145 PDZD8Q8NEN9 1154 aa11.73□□□□□ -0.53
HPS4-202ENST00000398145 TSSK1BQ9BXA7 367 aa11.73□□□□□ -0.53
HPS4-202ENST00000398145 THAP2Q9H0W7 228 aa11.73□□□□□ -0.53
HPS4-202ENST00000398145 MAD2L2Q9UI95 211 aa11.73□□□□□ -0.53
HPS4-202ENST00000398145 BCS1LQ9Y276 419 aa11.73□□□□□ -0.53
HPS4-202ENST00000398145 INO80B-WBP1J3KQ70 363 aa11.73□□□□□ -0.53
HPS4-202ENST00000398145 TRAPPC3O43617 180 aa11.73□□□□□ -0.53
HPS4-202ENST00000398145 HSPA4LO95757 839 aa11.73□□□□□ -0.53
HPS4-202ENST00000398145 GNA15P30679 374 aa11.73□□□□□ -0.53
HPS4-202ENST00000398145 ZNF571Q7Z3V5 609 aaPredicted RBP11.73□□□□□ -0.53
HPS4-202ENST00000398145 RHPN2Q8IUC4 686 aa11.73□□□□□ -0.53
HPS4-202ENST00000398145 KIAA0895Q8NCT3 520 aa11.73□□□□□ -0.53
HPS4-202ENST00000398145 HSPH1Q92598 858 aa11.73□□□□□ -0.53
HPS4-202ENST00000398145 RIOK1Q9BRS2 568 aaKnown RBP11.73□□□□□ -0.53
HPS4-202ENST00000398145 INO80BQ9C086 356 aaPredicted RBP11.73□□□□□ -0.53
HPS4-202ENST00000398145 DBNDD1Q9H9R9 158 aa11.73□□□□□ -0.53
HPS4-202ENST00000398145 NGRNQ9NPE2 291 aaKnown RBP11.73□□□□□ -0.53
HPS4-202ENST00000398145 PSMC3IPQ9P2W1 217 aaPredicted RBP11.73□□□□□ -0.53
HPS4-202ENST00000398145 O00370 1275 aa11.73□□□□□ -0.53
HPS4-202ENST00000398145 ASAP2O43150 1006 aa11.73□□□□□ -0.53
HPS4-202ENST00000398145 CYP11B2P19099 503 aa11.73□□□□□ -0.53
HPS4-202ENST00000398145 ARL4AP40617 200 aa11.73□□□□□ -0.53
HPS4-202ENST00000398145 EPHA7Q15375 998 aa11.73□□□□□ -0.53
HPS4-202ENST00000398145 EIF1ADQ8N9N8 165 aaKnown RBP11.73□□□□□ -0.53
HPS4-202ENST00000398145 FAM149B1Q96BN6 582 aa11.73□□□□□ -0.53
HPS4-202ENST00000398145 CCDC124Q96CT7 223 aaKnown RBP11.73□□□□□ -0.53
HPS4-202ENST00000398145 ZSWIM1Q9BR11 485 aa11.73□□□□□ -0.53
HPS4-202ENST00000398145 SLC13A1Q9BZW2 595 aa11.73□□□□□ -0.53
HPS4-202ENST00000398145 NARFQ9UHQ1 456 aa11.73□□□□□ -0.53
HPS4-202ENST00000398145 STRIP2Q9ULQ0 834 aa11.73□□□□□ -0.53
HPS4-202ENST00000398145 TSPOAP1O95153 1857 aa11.73□□□□□ -0.53
HPS4-202ENST00000398145 TCRBV5S4A2TA0A5A2 114 aa11.72□□□□□ -0.53
HPS4-202ENST00000398145 ARHGAP10A1A4S6 786 aa11.72□□□□□ -0.53
HPS4-202ENST00000398145 PALM3A6NDB9 673 aaPredicted RBP11.72□□□□□ -0.53
HPS4-202ENST00000398145 RANBP1P43487 201 aa11.72□□□□□ -0.53
HPS4-202ENST00000398145 ERFP50548 548 aa11.72□□□□□ -0.53
HPS4-202ENST00000398145 STX1BP61266 288 aa11.72□□□□□ -0.53
HPS4-202ENST00000398145 MRPS9P82933 396 aaKnown RBP11.72□□□□□ -0.53
HPS4-202ENST00000398145 KDSRQ06136 332 aa11.72□□□□□ -0.53
HPS4-202ENST00000398145 TNFAIP1Q13829 316 aa11.72□□□□□ -0.53
HPS4-202ENST00000398145 WDR59Q6PJI9 974 aa11.72□□□□□ -0.53
HPS4-202ENST00000398145 ZNF662Q6ZS27 426 aa11.72□□□□□ -0.53
HPS4-202ENST00000398145 TMC3Q7Z5M5 1100 aa11.72□□□□□ -0.53
HPS4-202ENST00000398145 ANKMY2Q8IV38 441 aa11.72□□□□□ -0.53
HPS4-202ENST00000398145 ICA1LQ8NDH6 482 aa11.72□□□□□ -0.53
HPS4-202ENST00000398145 C18orf8Q96DM3 657 aa11.72□□□□□ -0.53
HPS4-202ENST00000398145 OSBPL8Q9BZF1 889 aa11.72□□□□□ -0.53
HPS4-202ENST00000398145 AIPL1Q9NZN9 384 aa11.72□□□□□ -0.53
HPS4-202ENST00000398145 SLC9A2Q9UBY0 812 aa11.72□□□□□ -0.53
HPS4-202ENST00000398145 CLRN2A0PK11 232 aa11.72□□□□□ -0.53
HPS4-202ENST00000398145 FAM196BA6NMK8 535 aa11.72□□□□□ -0.53
HPS4-202ENST00000398145 PPP1R12AO14974 1030 aaPredicted RBP11.72□□□□□ -0.53
HPS4-202ENST00000398145 SLC37A4O43826 429 aa11.72□□□□□ -0.53
HPS4-202ENST00000398145 ITGA4P13612 1032 aa11.72□□□□□ -0.53
HPS4-202ENST00000398145 CACNB3P54284 484 aa11.72□□□□□ -0.53
HPS4-202ENST00000398145 SCARA5Q6ZMJ2 495 aa11.72□□□□□ -0.53
HPS4-202ENST00000398145 TEX2Q8IWB9 1127 aa11.72□□□□□ -0.53
HPS4-202ENST00000398145 PRPF38AQ8NAV1 312 aaKnown RBP11.72□□□□□ -0.53
HPS4-202ENST00000398145 TBC1D22BQ9NU19 505 aa11.72□□□□□ -0.53
HPS4-202ENST00000398145 A0A0A6YYK5 440 aaPredicted RBP11.72□□□□□ -0.53
HPS4-202ENST00000398145 RPS6KA4O75676 772 aa11.72□□□□□ -0.53
HPS4-202ENST00000398145 ABL1P00519 1130 aa11.72□□□□□ -0.53
HPS4-202ENST00000398145 TBXAS1P24557 533 aaPredicted RBP11.72□□□□□ -0.53
HPS4-202ENST00000398145 CTCFP49711 727 aaPredicted RBP11.72□□□□□ -0.53
HPS4-202ENST00000398145 JAK3P52333 1124 aa11.72□□□□□ -0.53
HPS4-202ENST00000398145 PHEXP78562 749 aa11.72□□□□□ -0.53
HPS4-202ENST00000398145 MED21Q13503 144 aa11.72□□□□□ -0.53
HPS4-202ENST00000398145 MTMR1Q13613 665 aa11.72□□□□□ -0.53
HPS4-202ENST00000398145 HIC1Q14526 733 aa11.72□□□□□ -0.53
HPS4-202ENST00000398145 SURF1Q15526 300 aa11.72□□□□□ -0.53
HPS4-202ENST00000398145 CEP55Q53EZ4 464 aa11.72□□□□□ -0.53
HPS4-202ENST00000398145 ZC2HC1CQ53FD0 456 aaPredicted RBP11.72□□□□□ -0.53
HPS4-202ENST00000398145 FBXO33Q7Z6M2 555 aa11.72□□□□□ -0.53
HPS4-202ENST00000398145 ZNF507Q8TCN5 953 aa11.72□□□□□ -0.53
HPS4-202ENST00000398145 CYP4F11Q9HBI6 524 aa11.72□□□□□ -0.53
HPS4-202ENST00000398145 PARVAQ9NVD7 372 aa11.72□□□□□ -0.53
HPS4-202ENST00000398145 GGA2Q9UJY4 613 aa11.72□□□□□ -0.53
HPS4-202ENST00000398145 AFG3L2Q9Y4W6 797 aa11.72□□□□□ -0.53
HPS4-202ENST00000398145 CES2O00748 559 aa11.72□□□□□ -0.53
HPS4-202ENST00000398145 PSAPP07602 524 aa11.72□□□□□ -0.53
HPS4-202ENST00000398145 PTENP60484 403 aa11.72□□□□□ -0.53
HPS4-202ENST00000398145 FAM160B1Q5W0V3 765 aa11.72□□□□□ -0.53
HPS4-202ENST00000398145 JADE1Q6IE81 842 aa11.72□□□□□ -0.53
HPS4-202ENST00000398145 MIS18BP1Q6P0N0 1132 aa11.72□□□□□ -0.53
HPS4-202ENST00000398145 BRINP3Q76B58 766 aa11.72□□□□□ -0.53
HPS4-202ENST00000398145 SDCCAG3Q96C92 435 aa11.72□□□□□ -0.53
HPS4-202ENST00000398145 UPF3AQ9H1J1 476 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms