RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 BCL9LQ86UU0 1499 aa7.46□□□□□ -1.21
SMCO1-201ENST00000397537 MIA2Q96PC5 1412 aa7.46□□□□□ -1.21
SMCO1-201ENST00000397537 SPATA31C2B4DYI2 1134 aa7.46□□□□□ -1.21
SMCO1-201ENST00000397537 SRGAP2O75044 1071 aa7.46□□□□□ -1.21
SMCO1-201ENST00000397537 TBCAO75347 108 aaKnown RBP7.46□□□□□ -1.21
SMCO1-201ENST00000397537 SCG2P13521 617 aa7.46□□□□□ -1.21
SMCO1-201ENST00000397537 NFKB1P19838 968 aa7.46□□□□□ -1.21
SMCO1-201ENST00000397537 ADH7P40394 386 aa7.46□□□□□ -1.21
SMCO1-201ENST00000397537 LRRC74AQ0VAA2 488 aa7.46□□□□□ -1.21
SMCO1-201ENST00000397537 PAK1Q13153 545 aa7.46□□□□□ -1.21
SMCO1-201ENST00000397537 UBE3CQ15386 1083 aa7.46□□□□□ -1.21
SMCO1-201ENST00000397537 SF3B3Q15393 1217 aaKnown RBP7.46□□□□□ -1.21
SMCO1-201ENST00000397537 SNX30Q5VWJ9 437 aa7.46□□□□□ -1.21
SMCO1-201ENST00000397537 SULT6B1Q6IMI4 303 aa7.46□□□□□ -1.21
SMCO1-201ENST00000397537 CEP68Q76N32 757 aa7.46□□□□□ -1.21
SMCO1-201ENST00000397537 SESTD1Q86VW0 696 aa7.46□□□□□ -1.21
SMCO1-201ENST00000397537 TBC1D21Q8IYX1 336 aa7.46□□□□□ -1.21
SMCO1-201ENST00000397537 MARCH10Q8NA82 808 aaPredicted RBP7.46□□□□□ -1.21
SMCO1-201ENST00000397537 MOSPD2Q8NHP6 518 aa7.46□□□□□ -1.21
SMCO1-201ENST00000397537 ANKS1AQ92625 1134 aa7.46□□□□□ -1.21
SMCO1-201ENST00000397537 IRX2Q9BZI1 471 aaPredicted RBP7.46□□□□□ -1.21
SMCO1-201ENST00000397537 RMI1Q9H9A7 625 aa7.46□□□□□ -1.21
SMCO1-201ENST00000397537 HOXC10Q9NYD6 342 aa7.46□□□□□ -1.21
SMCO1-201ENST00000397537 SH3BGRL2Q9UJC5 107 aa7.46□□□□□ -1.21
SMCO1-201ENST00000397537 SNX8Q9Y5X2 465 aa7.46□□□□□ -1.21
SMCO1-201ENST00000397537 CEP350Q5VT06 3117 aa7.46□□□□□ -1.22
SMCO1-201ENST00000397537 KIF14Q15058 1648 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 FAM234BA2RU67 622 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 CCDC69A6NI79 296 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 BTBD11A6QL63 1104 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 DCDC2CA8MYV0 355 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 UBE2CO00762 179 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 DVL2O14641 736 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 FYB1O15117 783 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 SLC22A3O75751 556 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 KRT37O76014 449 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 TMEM63AO94886 807 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 ENDOD1O94919 500 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 TNFRSF6BO95407 300 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 PLATP00750 562 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 A1BGP04217 495 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 ESRRAP11474 423 aaPredicted RBP7.45□□□□□ -1.22
SMCO1-201ENST00000397537 CHMP24386 653 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 PRPHP41219 470 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 COX10Q12887 443 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 MRPL28Q13084 256 aaKnown RBP7.45□□□□□ -1.22
SMCO1-201ENST00000397537 ACVR2BQ13705 512 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 EFR3AQ14156 821 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 KCNB1Q14721 858 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 WTAPQ15007 396 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 CTXN3Q4LDR2 81 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 RAB12Q6IQ22 244 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 SLC22A25Q6T423 547 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 OTUD6AQ7L8S5 288 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 RIOX2Q8IUF8 465 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 MCATQ8IVS2 390 aaKnown RBP7.45□□□□□ -1.22
SMCO1-201ENST00000397537 IPMKQ8NFU5 416 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 ELMO3Q96BJ8 720 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 KIF1BPQ96EK5 621 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 BORCS6Q96GS4 357 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 ACAP3Q96P50 834 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 ZFYVE21Q9BQ24 234 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 PRDM13Q9H4Q3 707 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 RBM28Q9NW13 759 aaKnown RBP7.45□□□□□ -1.22
SMCO1-201ENST00000397537 TJP2Q9UDY2 1190 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 SOX13Q9UN79 622 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 EDARQ9UNE0 448 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 GPR55Q9Y2T6 319 aaPredicted RBP7.45□□□□□ -1.22
SMCO1-201ENST00000397537 PZPP20742 1482 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 ARNTLO00327 626 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 CAPN9O14815 690 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 MSX1P28360 303 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 AFMP43652 599 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 RNF144AP50876 292 aaPredicted RBP7.45□□□□□ -1.22
SMCO1-201ENST00000397537 ALDH3A2P51648 485 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 VAMP2P63027 116 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 FMO1Q01740 532 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 FSCN1Q16658 493 aaKnown RBP7.45□□□□□ -1.22
SMCO1-201ENST00000397537 PLA2G2CQ5R387 149 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 SHQ1Q6PI26 577 aaKnown RBP7.45□□□□□ -1.22
SMCO1-201ENST00000397537 BTNL9Q6UXG8 535 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 MTERF4Q7Z6M4 381 aaKnown RBP7.45□□□□□ -1.22
SMCO1-201ENST00000397537 DEFB132Q7Z7B7 95 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 TXLNBQ8N3L3 684 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 KCTD6Q8NC69 237 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 IL31RAQ8NI17 732 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.45□□□□□ -1.22
SMCO1-201ENST00000397537 FNBP1Q96RU3 617 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 CD244Q9BZW8 370 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 SENP6Q9GZR1 1112 aaPredicted RBP7.45□□□□□ -1.22
SMCO1-201ENST00000397537 ZMAT4Q9H898 229 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 ARMT1Q9H993 441 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 ZNF287Q9HBT7 754 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 TOMM22Q9NS69 142 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 RASAL2Q9UJF2 1139 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 NPFFR2Q9Y5X5 522 aa7.45□□□□□ -1.22
SMCO1-201ENST00000397537 CDC42BPBQ9Y5S2 1711 aa7.44□□□□□ -1.22
SMCO1-201ENST00000397537 H7C1D1 291 aa7.44□□□□□ -1.22
SMCO1-201ENST00000397537 J3QW42 95 aa7.44□□□□□ -1.22
SMCO1-201ENST00000397537 TSPAN3O60637 253 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms