RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 EPHB6O15197 1021 aa29.85■■■□□ 2.37
CPNE1-203ENST00000397442 AXLP30530 894 aa29.85■■■□□ 2.37
CPNE1-203ENST00000397442 CASP14P31944 242 aa29.85■■■□□ 2.37
CPNE1-203ENST00000397442 GCLMP48507 274 aa29.85■■■□□ 2.37
CPNE1-203ENST00000397442 TRIM14Q14142 442 aa29.85■■■□□ 2.37
CPNE1-203ENST00000397442 HS1BP3Q53T59 392 aa29.85■■■□□ 2.37
CPNE1-203ENST00000397442 FIGNQ5HY92 759 aa29.85■■■□□ 2.37
CPNE1-203ENST00000397442 FAM26DQ5JW98 314 aa29.85■■■□□ 2.37
CPNE1-203ENST00000397442 PPFIBP1Q86W92 1011 aa29.85■■■□□ 2.37
CPNE1-203ENST00000397442 TMEM192Q8IY95 271 aa29.85■■■□□ 2.37
CPNE1-203ENST00000397442 TC2NQ8N9U0 490 aa29.85■■■□□ 2.37
CPNE1-203ENST00000397442 OSBPL7Q9BZF2 842 aa29.85■■■□□ 2.37
CPNE1-203ENST00000397442 DLATP10515 647 aaKnown RBP29.85■■■□□ 2.37
CPNE1-203ENST00000397442 NCBP1Q09161 790 aaKnown RBP29.85■■■□□ 2.37
CPNE1-203ENST00000397442 NOTUMQ6P988 496 aa29.85■■■□□ 2.37
CPNE1-203ENST00000397442 CPLX3Q8WVH0 158 aa29.85■■■□□ 2.37
CPNE1-203ENST00000397442 PCMTD1Q96MG8 357 aaPredicted RBP29.85■■■□□ 2.37
CPNE1-203ENST00000397442 ZNF830Q96NB3 372 aaPredicted RBP29.85■■■□□ 2.37
CPNE1-203ENST00000397442 TMEM117Q9H0C3 514 aa29.85■■■□□ 2.37
CPNE1-203ENST00000397442 KCNF1Q9H3M0 494 aa29.85■■■□□ 2.37
CPNE1-203ENST00000397442 FAM207AQ9NSI2 230 aaPredicted RBP29.85■■■□□ 2.37
CPNE1-203ENST00000397442 ANK1P16157 1881 aa29.84■■■□□ 2.37
CPNE1-203ENST00000397442 TTC26A0AVF1 554 aa29.84■■■□□ 2.37
CPNE1-203ENST00000397442 PMM2O15305 246 aa29.84■■■□□ 2.37
CPNE1-203ENST00000397442 CAND2O75155 1236 aa29.84■■■□□ 2.37
CPNE1-203ENST00000397442 TFRCP02786 760 aaKnown RBP29.84■■■□□ 2.37
CPNE1-203ENST00000397442 SLC9A1P19634 815 aa29.84■■■□□ 2.37
CPNE1-203ENST00000397442 PON1P27169 355 aa29.84■■■□□ 2.37
CPNE1-203ENST00000397442 ADKP55263 362 aaKnown RBP29.84■■■□□ 2.37
CPNE1-203ENST00000397442 OSTNP61366 133 aa29.84■■■□□ 2.37
CPNE1-203ENST00000397442 MYL7Q01449 175 aa29.84■■■□□ 2.37
CPNE1-203ENST00000397442 ENOX2Q16206 610 aaKnown RBP29.84■■■□□ 2.37
CPNE1-203ENST00000397442 EXOC3L4Q17RC7 722 aa29.84■■■□□ 2.37
CPNE1-203ENST00000397442 GBP6Q6ZN66 633 aa29.84■■■□□ 2.37
CPNE1-203ENST00000397442 USP37Q86T82 979 aa29.84■■■□□ 2.37
CPNE1-203ENST00000397442 LRRC8AQ8IWT6 810 aa29.84■■■□□ 2.37
CPNE1-203ENST00000397442 FAM126BQ8IXS8 530 aa29.84■■■□□ 2.37
CPNE1-203ENST00000397442 ZNF516Q92618 1163 aa29.84■■■□□ 2.37
CPNE1-203ENST00000397442 TRIM44Q96DX7 344 aaPredicted RBP29.84■■■□□ 2.37
CPNE1-203ENST00000397442 NUP58Q9BVL2 599 aa29.84■■■□□ 2.37
CPNE1-203ENST00000397442 PTPRJQ12913 1337 aa29.83■■■□□ 2.37
CPNE1-203ENST00000397442 MEFVO15553 781 aaPredicted RBP29.83■■■□□ 2.37
CPNE1-203ENST00000397442 NOL4O94818 638 aa29.83■■■□□ 2.37
CPNE1-203ENST00000397442 TRIM21P19474 475 aaKnown RBP29.83■■■□□ 2.37
CPNE1-203ENST00000397442 APBA1Q02410 837 aa29.83■■■□□ 2.37
CPNE1-203ENST00000397442 ZNF618Q5T7W0 954 aa29.83■■■□□ 2.37
CPNE1-203ENST00000397442 SLC27A1Q6PCB7 646 aa29.83■■■□□ 2.37
CPNE1-203ENST00000397442 ADPGKQ9BRR6 497 aa29.83■■■□□ 2.37
CPNE1-203ENST00000397442 GCNT4Q9P109 453 aa29.83■■■□□ 2.37
CPNE1-203ENST00000397442 PIN4Q9Y237 131 aaKnown RBP29.83■■■□□ 2.37
CPNE1-203ENST00000397442 P4HA2O15460 535 aa29.82■■■□□ 2.36
CPNE1-203ENST00000397442 STX10O60499 249 aa29.82■■■□□ 2.36
CPNE1-203ENST00000397442 MFAP3LO75121 409 aa29.82■■■□□ 2.36
CPNE1-203ENST00000397442 STAG3L1P0CL83 205 aa29.82■■■□□ 2.36
CPNE1-203ENST00000397442 GTF2H1P32780 548 aa29.82■■■□□ 2.36
CPNE1-203ENST00000397442 DCAF4L1Q3SXM0 396 aa29.82■■■□□ 2.36
CPNE1-203ENST00000397442 TRAF7Q6Q0C0 670 aa29.82■■■□□ 2.36
CPNE1-203ENST00000397442 CCDC150Q8NCX0 1101 aa29.82■■■□□ 2.36
CPNE1-203ENST00000397442 FAM84AQ96KN4 292 aa29.82■■■□□ 2.36
CPNE1-203ENST00000397442 LSM14BQ9BX40 385 aaKnown RBP29.82■■■□□ 2.36
CPNE1-203ENST00000397442 EIF2AQ9BY44 585 aaKnown RBP29.82■■■□□ 2.36
CPNE1-203ENST00000397442 CAPN11Q9UMQ6 739 aa29.82■■■□□ 2.36
CPNE1-203ENST00000397442 AKR1B15C9JRZ8 316 aaPredicted RBP29.82■■■□□ 2.36
CPNE1-203ENST00000397442 N4BP1O75113 896 aaKnown RBP29.82■■■□□ 2.36
CPNE1-203ENST00000397442 RPS6KA5O75582 802 aa29.82■■■□□ 2.36
CPNE1-203ENST00000397442 CD4P01730 458 aa29.82■■■□□ 2.36
CPNE1-203ENST00000397442 CLTAP09496 248 aa29.82■■■□□ 2.36
CPNE1-203ENST00000397442 CKBP12277 381 aa29.82■■■□□ 2.36
CPNE1-203ENST00000397442 GJA8P48165 433 aa29.82■■■□□ 2.36
CPNE1-203ENST00000397442 MXI1P50539 228 aa29.82■■■□□ 2.36
CPNE1-203ENST00000397442 LRMPQ12912 555 aa29.82■■■□□ 2.36
CPNE1-203ENST00000397442 FBXO47Q5MNV8 452 aa29.82■■■□□ 2.36
CPNE1-203ENST00000397442 C15orf39Q6ZRI6 1047 aa29.82■■■□□ 2.36
CPNE1-203ENST00000397442 LMO3Q8TAP4 145 aa29.82■■■□□ 2.36
CPNE1-203ENST00000397442 FNBP1Q96RU3 617 aa29.82■■■□□ 2.36
CPNE1-203ENST00000397442 AGO3Q9H9G7 860 aaKnown RBP29.82■■■□□ 2.36
CPNE1-203ENST00000397442 TMEM8AQ9HCN3 771 aa29.82■■■□□ 2.36
CPNE1-203ENST00000397442 NPTXRO95502 500 aa29.81■■■□□ 2.36
CPNE1-203ENST00000397442 ACTN1P12814 892 aa29.81■■■□□ 2.36
CPNE1-203ENST00000397442 EPC2Q52LR7 807 aa29.81■■■□□ 2.36
CPNE1-203ENST00000397442 UBXN11Q5T124 520 aa29.81■■■□□ 2.36
CPNE1-203ENST00000397442 CGRRF1Q99675 332 aa29.81■■■□□ 2.36
CPNE1-203ENST00000397442 GANQ9H2C0 597 aa29.81■■■□□ 2.36
CPNE1-203ENST00000397442 SIX2Q9NPC8 291 aa29.81■■■□□ 2.36
CPNE1-203ENST00000397442 PLCB1Q9NQ66 1216 aa29.81■■■□□ 2.36
CPNE1-203ENST00000397442 ST3GAL5Q9UNP4 418 aa29.81■■■□□ 2.36
CPNE1-203ENST00000397442 A0A1W2PQJ5 194 aa29.8■■■□□ 2.36
CPNE1-203ENST00000397442 CXCL8P10145 99 aa29.8■■■□□ 2.36
CPNE1-203ENST00000397442 COL6A1P12109 1028 aa29.8■■■□□ 2.36
CPNE1-203ENST00000397442 POU5F1Q01860 360 aaKnown RBP29.8■■■□□ 2.36
CPNE1-203ENST00000397442 KYAT1Q16773 422 aa29.8■■■□□ 2.36
CPNE1-203ENST00000397442 LMBRD2Q68DH5 695 aaPredicted RBP29.8■■■□□ 2.36
CPNE1-203ENST00000397442 KRT39Q6A163 491 aa29.8■■■□□ 2.36
CPNE1-203ENST00000397442 TRIM65Q6PJ69 517 aa29.8■■■□□ 2.36
CPNE1-203ENST00000397442 SV2AQ7L0J3 742 aa29.8■■■□□ 2.36
CPNE1-203ENST00000397442 NEK11Q8NG66 645 aa29.8■■■□□ 2.36
CPNE1-203ENST00000397442 IQCDQ96DY2 449 aa29.8■■■□□ 2.36
CPNE1-203ENST00000397442 COQ4Q9Y3A0 265 aa29.8■■■□□ 2.36
CPNE1-203ENST00000397442 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP29.8■■■□□ 2.362e-10■□□□□ 8.4
CPNE1-203ENST00000397442 TULP1O00294 542 aaPredicted RBP29.79■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms