RNA–Protein interactions for RNA: ENST00000397428.7

SYNE4-203, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 382 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-203ENST00000397428 SLC2A4RGQ9NR83 387 aa13.23□□□□□ -0.29
SYNE4-203ENST00000397428 DLGAP2Q9P1A6 1054 aa13.23□□□□□ -0.29
SYNE4-203ENST00000397428 FRYLO94915 3013 aa13.23□□□□□ -0.29
SYNE4-203ENST00000397428 WNT7AO00755 349 aa13.22□□□□□ -0.29
SYNE4-203ENST00000397428 RPL17P18621 184 aaKnown RBP13.22□□□□□ -0.29
SYNE4-203ENST00000397428 TUSC3Q13454 348 aa13.22□□□□□ -0.29
SYNE4-203ENST00000397428 HSP90AA2PQ14568 343 aaPredicted RBP13.22□□□□□ -0.29
SYNE4-203ENST00000397428 ANKRD1Q15327 319 aa13.22□□□□□ -0.29
SYNE4-203ENST00000397428 RTP2Q5QGT7 225 aa13.22□□□□□ -0.29
SYNE4-203ENST00000397428 PRSS55Q6UWB4 352 aaPredicted RBP13.22□□□□□ -0.29
SYNE4-203ENST00000397428 LNX1Q8TBB1 728 aaPredicted RBP13.22□□□□□ -0.29
SYNE4-203ENST00000397428 GPR152Q8TDT2 470 aa13.22□□□□□ -0.29
SYNE4-203ENST00000397428 PRIMPOLQ96LW4 560 aa13.22□□□□□ -0.29
SYNE4-203ENST00000397428 POLR3FQ9H1D9 316 aaPredicted RBP13.22□□□□□ -0.29
SYNE4-203ENST00000397428 PRMT7Q9NVM4 692 aaPredicted RBP13.22□□□□□ -0.29
SYNE4-203ENST00000397428 DAXXQ9UER7 740 aaPredicted RBP13.22□□□□□ -0.29
SYNE4-203ENST00000397428 PARP2Q9UGN5 583 aa13.22□□□□□ -0.29
SYNE4-203ENST00000397428 SIT1Q9Y3P8 196 aa13.22□□□□□ -0.29
SYNE4-203ENST00000397428 ZNF292O60281 2723 aa13.22□□□□□ -0.29
SYNE4-203ENST00000397428 TTLL13PA6NNM8 815 aa13.21□□□□□ -0.29
SYNE4-203ENST00000397428 PTGESO14684 152 aa13.21□□□□□ -0.29
SYNE4-203ENST00000397428 HNRNPA1P09651 372 aaKnown RBP eCLIP13.21□□□□□ -0.29
SYNE4-203ENST00000397428 STARD6P59095 220 aa13.21□□□□□ -0.29
SYNE4-203ENST00000397428 ANAPC15P60006 121 aa13.21□□□□□ -0.29
SYNE4-203ENST00000397428 NAB2Q15742 525 aa13.21□□□□□ -0.29
SYNE4-203ENST00000397428 ME3Q16798 604 aa13.21□□□□□ -0.29
SYNE4-203ENST00000397428 CDCA2Q69YH5 1023 aaPredicted RBP13.21□□□□□ -0.29
SYNE4-203ENST00000397428 CATSPER3Q86XQ3 398 aa13.21□□□□□ -0.29
SYNE4-203ENST00000397428 GLYCTKQ8IVS8 523 aa13.21□□□□□ -0.29
SYNE4-203ENST00000397428 NECAB1Q8N987 351 aa13.21□□□□□ -0.29
SYNE4-203ENST00000397428 PIK3R5Q8WYR1 880 aa13.21□□□□□ -0.29
SYNE4-203ENST00000397428 RPP25Q9BUL9 199 aaKnown RBP13.21□□□□□ -0.29
SYNE4-203ENST00000397428 CXCL16Q9H2A7 254 aa13.21□□□□□ -0.29
SYNE4-203ENST00000397428 TBC1D17Q9HA65 648 aa13.21□□□□□ -0.29
SYNE4-203ENST00000397428 TUFT1Q9NNX1 390 aa13.21□□□□□ -0.29
SYNE4-203ENST00000397428 GPRC5CQ9NQ84 441 aa13.21□□□□□ -0.29
SYNE4-203ENST00000397428 CACNG4Q9UBN1 327 aa13.21□□□□□ -0.29
SYNE4-203ENST00000397428 CA14Q9ULX7 337 aa13.21□□□□□ -0.29
SYNE4-203ENST00000397428 DOCK8Q8NF50 2099 aa13.2□□□□□ -0.3
SYNE4-203ENST00000397428 SF3B1O75533 1304 aaKnown RBP eCLIP13.2□□□□□ -0.3
SYNE4-203ENST00000397428 SPTBN4Q9H254 2564 aa13.2□□□□□ -0.3
SYNE4-203ENST00000397428 NEMFO60524 1076 aa13.2□□□□□ -0.3
SYNE4-203ENST00000397428 THP07101 528 aa13.2□□□□□ -0.3
SYNE4-203ENST00000397428 KCNA4P22459 653 aa13.2□□□□□ -0.3
SYNE4-203ENST00000397428 FSHRP23945 695 aa13.2□□□□□ -0.3
SYNE4-203ENST00000397428 GPC5P78333 572 aa13.2□□□□□ -0.3
SYNE4-203ENST00000397428 RAB33AQ14088 237 aa13.2□□□□□ -0.3
SYNE4-203ENST00000397428 FAM171A1Q5VUB5 890 aa13.2□□□□□ -0.3
SYNE4-203ENST00000397428 DCLRE1AQ6PJP8 1040 aa13.2□□□□□ -0.3
SYNE4-203ENST00000397428 ERMP1Q7Z2K6 904 aa13.2□□□□□ -0.3
SYNE4-203ENST00000397428 GRASPQ7Z6J2 395 aaPredicted RBP13.2□□□□□ -0.3
SYNE4-203ENST00000397428 MCPH1Q8NEM0 835 aa13.2□□□□□ -0.3
SYNE4-203ENST00000397428 NACC1Q96RE7 527 aa13.2□□□□□ -0.3
SYNE4-203ENST00000397428 TTPALQ9BTX7 342 aa13.2□□□□□ -0.3
SYNE4-203ENST00000397428 POLR3CQ9BUI4 534 aaPredicted RBP13.2□□□□□ -0.3
SYNE4-203ENST00000397428 TMEM60Q9H2L4 133 aa13.2□□□□□ -0.3
SYNE4-203ENST00000397428 PDZD7Q9H5P4 517 aa13.2□□□□□ -0.3
SYNE4-203ENST00000397428 BRMS1Q9HCU9 246 aa13.2□□□□□ -0.3
SYNE4-203ENST00000397428 FBXW11Q9UKB1 542 aa13.2□□□□□ -0.3
SYNE4-203ENST00000397428 CDH7Q9ULB5 785 aa13.2□□□□□ -0.3
SYNE4-203ENST00000397428 NUMBLQ9Y6R0 609 aa13.2□□□□□ -0.3
SYNE4-203ENST00000397428 PTPRZ1P23471 2315 aaPredicted RBP13.2□□□□□ -0.3
SYNE4-203ENST00000397428 MYO15AQ9UKN7 3530 aa13.19□□□□□ -0.3
SYNE4-203ENST00000397428 LRRIQ4A6NIV6 560 aa13.19□□□□□ -0.3
SYNE4-203ENST00000397428 ACKR2O00590 384 aa13.19□□□□□ -0.3
SYNE4-203ENST00000397428 N4BP3O15049 544 aa13.19□□□□□ -0.3
SYNE4-203ENST00000397428 ADAM12O43184 909 aa13.19□□□□□ -0.3
SYNE4-203ENST00000397428 USO1O60763 962 aaKnown RBP13.19□□□□□ -0.3
SYNE4-203ENST00000397428 MED24O75448 989 aa13.19□□□□□ -0.3
SYNE4-203ENST00000397428 CYP11B2P19099 503 aa13.19□□□□□ -0.3
SYNE4-203ENST00000397428 ATP2B1P20020 1258 aa13.19□□□□□ -0.3
SYNE4-203ENST00000397428 HOXA9P31269 272 aa13.19□□□□□ -0.3
SYNE4-203ENST00000397428 UVSSAQ2YD98 709 aa13.19□□□□□ -0.3
SYNE4-203ENST00000397428 PARM1Q6UWI2 310 aa13.19□□□□□ -0.3
SYNE4-203ENST00000397428 RTL10Q7L3V2 364 aa13.19□□□□□ -0.3
SYNE4-203ENST00000397428 GET4Q7L5D6 327 aaPredicted RBP13.19□□□□□ -0.3
SYNE4-203ENST00000397428 MAEAQ7L5Y9 396 aa13.19□□□□□ -0.3
SYNE4-203ENST00000397428 DIS3L2Q8IYB7 885 aaKnown RBP13.19□□□□□ -0.3
SYNE4-203ENST00000397428 NSUN7Q8NE18 718 aaKnown RBP13.19□□□□□ -0.3
SYNE4-203ENST00000397428 FGF14Q92915 247 aa13.19□□□□□ -0.3
SYNE4-203ENST00000397428 GTF3C6Q969F1 213 aa13.19□□□□□ -0.3
SYNE4-203ENST00000397428 CCDC113Q9H0I3 377 aa13.19□□□□□ -0.3
SYNE4-203ENST00000397428 C2orf40Q9H1Z8 148 aa13.19□□□□□ -0.3
SYNE4-203ENST00000397428 ARHGEF3Q9NR81 526 aa13.19□□□□□ -0.3
SYNE4-203ENST00000397428 SNTG2Q9NY99 539 aa13.19□□□□□ -0.3
SYNE4-203ENST00000397428 CASTOR2A6NHX0 329 aa13.18□□□□□ -0.3
SYNE4-203ENST00000397428 POTEMA6NI47 508 aa13.18□□□□□ -0.3
SYNE4-203ENST00000397428 KIF4AO95239 1232 aa13.18□□□□□ -0.3
SYNE4-203ENST00000397428 LARGE1O95461 756 aa13.18□□□□□ -0.3
SYNE4-203ENST00000397428 LMNAP02545 664 aaKnown RBP13.18□□□□□ -0.3
SYNE4-203ENST00000397428 DCNP07585 359 aaKnown RBP13.18□□□□□ -0.3
SYNE4-203ENST00000397428 POU2F2P09086 479 aa13.18□□□□□ -0.3
SYNE4-203ENST00000397428 SP9P0CG40 484 aa13.18□□□□□ -0.3
SYNE4-203ENST00000397428 GLULP15104 373 aa13.18□□□□□ -0.3
SYNE4-203ENST00000397428 FGFR3P22607 806 aa13.18□□□□□ -0.3
SYNE4-203ENST00000397428 IGFBP6P24592 240 aaPredicted RBP13.18□□□□□ -0.3
SYNE4-203ENST00000397428 RPA1P27694 616 aa13.18□□□□□ -0.3
SYNE4-203ENST00000397428 ID4P47928 161 aa13.18□□□□□ -0.3
SYNE4-203ENST00000397428 NTHL1P78549 312 aa13.18□□□□□ -0.3
SYNE4-203ENST00000397428 ELAVL2Q12926 359 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms