RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 GPR161Q8N6U8 529 aaKnown RBP15.12■□□□□ 0.01
SEC13-205ENST00000397101 SUMF1Q8NBK3 374 aa15.12■□□□□ 0.01
SEC13-205ENST00000397101 CNNM3Q8NE01 707 aa15.12■□□□□ 0.01
SEC13-205ENST00000397101 GPR152Q8TDT2 470 aa15.12■□□□□ 0.01
SEC13-205ENST00000397101 RIN2Q8WYP3 895 aaPredicted RBP15.12■□□□□ 0.01
SEC13-205ENST00000397101 ZNF707Q96C28 371 aaPredicted RBP15.12■□□□□ 0.01
SEC13-205ENST00000397101 FAM20AQ96MK3 541 aa15.12■□□□□ 0.01
SEC13-205ENST00000397101 MBOAT7Q96N66 472 aa15.12■□□□□ 0.01
SEC13-205ENST00000397101 MYADMQ96S97 322 aa15.12■□□□□ 0.01
SEC13-205ENST00000397101 RAB34Q9BZG1 259 aa15.12■□□□□ 0.01
SEC13-205ENST00000397101 GBP3Q9H0R5 595 aa15.12■□□□□ 0.01
SEC13-205ENST00000397101 UNC45AQ9H3U1 944 aa15.12■□□□□ 0.01
SEC13-205ENST00000397101 IFT122Q9HBG6 1241 aa15.12■□□□□ 0.01
SEC13-205ENST00000397101 ZDHHC7Q9NXF8 308 aa15.12■□□□□ 0.01
SEC13-205ENST00000397101 SEPT9Q9UHD8 586 aaPredicted RBP15.12■□□□□ 0.01
SEC13-205ENST00000397101 CA14Q9ULX7 337 aa15.12■□□□□ 0.01
SEC13-205ENST00000397101 PCDHA7Q9UN72 937 aa15.12■□□□□ 0.01
SEC13-205ENST00000397101 PSMD10O75832 226 aa15.11■□□□□ 0.01
SEC13-205ENST00000397101 PTMSP20962 102 aa15.11■□□□□ 0.01
SEC13-205ENST00000397101 PRPHP41219 470 aa15.11■□□□□ 0.01
SEC13-205ENST00000397101 DSG1Q02413 1049 aa15.11■□□□□ 0.01
SEC13-205ENST00000397101 LONRF3Q496Y0 759 aa15.11■□□□□ 0.01
SEC13-205ENST00000397101 LRCH2Q5VUJ6 765 aa15.11■□□□□ 0.01
SEC13-205ENST00000397101 SRGAP1Q7Z6B7 1085 aa15.11■□□□□ 0.01
SEC13-205ENST00000397101 RHPN2Q8IUC4 686 aa15.11■□□□□ 0.01
SEC13-205ENST00000397101 C4orf32Q8N8J7 132 aa15.11■□□□□ 0.01
SEC13-205ENST00000397101 PJA1Q8NG27 643 aa15.11■□□□□ 0.01
SEC13-205ENST00000397101 SMG7Q92540 1137 aaKnown RBP15.11■□□□□ 0.01
SEC13-205ENST00000397101 GJA10Q969M2 543 aa15.11■□□□□ 0.01
SEC13-205ENST00000397101 SHDQ96IW2 340 aa15.11■□□□□ 0.01
SEC13-205ENST00000397101 CLIC6Q96NY7 704 aa15.11■□□□□ 0.01
SEC13-205ENST00000397101 TTC12Q9H892 705 aaPredicted RBP15.11■□□□□ 0.01
SEC13-205ENST00000397101 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.11■□□□□ 0.01
SEC13-205ENST00000397101 MARCH5Q9NX47 278 aa15.11■□□□□ 0.01
SEC13-205ENST00000397101 PCDHA12Q9UN75 941 aa15.11■□□□□ 0.01
SEC13-205ENST00000397101 PPME1Q9Y570 386 aa15.11■□□□□ 0.01
SEC13-205ENST00000397101 SRPRBQ9Y5M8 271 aaKnown RBP15.11■□□□□ 0.01
SEC13-205ENST00000397101 CEP250Q9BV73 2442 aa15.11■□□□□ 0.01
SEC13-205ENST00000397101 NCOR2Q9Y618 2525 aa15.1■□□□□ 0.01
SEC13-205ENST00000397101 SPTLC1O15269 473 aa15.1■□□□□ 0.01
SEC13-205ENST00000397101 KINO60870 393 aaKnown RBP15.1■□□□□ 0.01
SEC13-205ENST00000397101 SSBP05455 408 aaKnown RBP eCLIP15.1■□□□□ 0.01
SEC13-205ENST00000397101 DCNP07585 359 aaKnown RBP15.1■□□□□ 0.01
SEC13-205ENST00000397101 GLUD2P49448 558 aa15.1■□□□□ 0.01
SEC13-205ENST00000397101 HTR4Q13639 388 aa15.1■□□□□ 0.01
SEC13-205ENST00000397101 PCBP1Q15365 356 aaKnown RBP eCLIP15.1■□□□□ 0.01
SEC13-205ENST00000397101 NCAPH2Q6IBW4 605 aa15.1■□□□□ 0.01
SEC13-205ENST00000397101 DCLRE1AQ6PJP8 1040 aa15.1■□□□□ 0.01
SEC13-205ENST00000397101 MIER3Q7Z3K6 550 aa15.1■□□□□ 0.01
SEC13-205ENST00000397101 EXOC8Q8IYI6 725 aa15.1■□□□□ 0.01
SEC13-205ENST00000397101 COLGALT2Q8IYK4 626 aa15.1■□□□□ 0.01
SEC13-205ENST00000397101 RASSF8Q8NHQ8 419 aa15.1■□□□□ 0.01
SEC13-205ENST00000397101 MTMR9Q96QG7 549 aa15.1■□□□□ 0.01
SEC13-205ENST00000397101 HINFPQ9BQA5 517 aa15.1■□□□□ 0.01
SEC13-205ENST00000397101 OSBPL6Q9BZF3 934 aa15.1■□□□□ 0.01
SEC13-205ENST00000397101 NT5C3AQ9H0P0 336 aa15.1■□□□□ 0.01
SEC13-205ENST00000397101 CSRNP2Q9H175 543 aa15.1■□□□□ 0.01
SEC13-205ENST00000397101 CHST7Q9NS84 486 aa15.1■□□□□ 0.01
SEC13-205ENST00000397101 FAM13BQ9NYF5 915 aa15.1■□□□□ 0.01
SEC13-205ENST00000397101 FBXO2Q9UK22 296 aaPredicted RBP15.1■□□□□ 0.01
SEC13-205ENST00000397101 FBXO4Q9UKT5 387 aa15.1■□□□□ 0.01
SEC13-205ENST00000397101 DOCK8Q8NF50 2099 aa15.1■□□□□ 0.01
SEC13-205ENST00000397101 CACNA1BQ00975 2339 aa15.1■□□□□ 0.01
SEC13-205ENST00000397101 CHMP2AO43633 222 aa15.09■□□□□ 0.01
SEC13-205ENST00000397101 RFPL2O75678 378 aa15.09■□□□□ 0.01
SEC13-205ENST00000397101 HOXA11P31270 313 aaPredicted RBP15.09■□□□□ 0.01
SEC13-205ENST00000397101 LONP1P36776 959 aaKnown RBP15.09■□□□□ 0.01
SEC13-205ENST00000397101 TXLNAP40222 546 aa15.09■□□□□ 0.01
SEC13-205ENST00000397101 MAGEA9P43362 315 aa15.09■□□□□ 0.01
SEC13-205ENST00000397101 AFF1P51825 1210 aaKnown RBP15.09■□□□□ 0.01
SEC13-205ENST00000397101 DSC1Q08554 894 aa15.09■□□□□ 0.01
SEC13-205ENST00000397101 SPECC1Q5M775 1068 aa15.09■□□□□ 0.01
SEC13-205ENST00000397101 UBXN11Q5T124 520 aa15.09■□□□□ 0.01
SEC13-205ENST00000397101 ADALQ6DHV7 355 aa15.09■□□□□ 0.01
SEC13-205ENST00000397101 MAML2Q8IZL2 1156 aaPredicted RBP15.09■□□□□ 0.01
SEC13-205ENST00000397101 ETNPPLQ8TBG4 499 aa15.09■□□□□ 0.01
SEC13-205ENST00000397101 HAS1Q92839 578 aa15.09■□□□□ 0.01
SEC13-205ENST00000397101 NLRP4Q96MN2 994 aa15.09■□□□□ 0.01
SEC13-205ENST00000397101 DDX23Q9BUQ8 820 aaKnown RBP15.09■□□□□ 0.01
SEC13-205ENST00000397101 PRKD2Q9BZL6 878 aa15.09■□□□□ 0.01
SEC13-205ENST00000397101 KCNMB3Q9NPA1 279 aa15.09■□□□□ 0.01
SEC13-205ENST00000397101 FNIP2Q9P278 1114 aa15.09■□□□□ 0.01
SEC13-205ENST00000397101 LRWD1Q9UFC0 647 aa15.09■□□□□ 0.01
SEC13-205ENST00000397101 COL4A3BPQ9Y5P4 624 aa15.09■□□□□ 0.01
SEC13-205ENST00000397101 MYH15Q9Y2K3 1946 aa15.08■□□□□ 0
SEC13-205ENST00000397101 C2CD2LO14523 706 aa15.08■□□□□ 0
SEC13-205ENST00000397101 GADD45BO75293 160 aaPredicted RBP15.08■□□□□ 0
SEC13-205ENST00000397101 GLULP15104 373 aa15.08■□□□□ 0
SEC13-205ENST00000397101 UBE2HP62256 183 aa15.08■□□□□ 0
SEC13-205ENST00000397101 CREMQ03060 361 aa15.08■□□□□ 0
SEC13-205ENST00000397101 PRKCQQ04759 706 aa15.08■□□□□ 0
SEC13-205ENST00000397101 GRIN1Q05586 938 aa15.08■□□□□ 0
SEC13-205ENST00000397101 NFKBIBQ15653 356 aa15.08■□□□□ 0
SEC13-205ENST00000397101 ZRSR1Q15695 479 aaKnown RBP15.08■□□□□ 0
SEC13-205ENST00000397101 LILRA6Q6PI73 481 aa15.08■□□□□ 0
SEC13-205ENST00000397101 RSPO2Q6UXX9 243 aaPredicted RBP15.08■□□□□ 0
SEC13-205ENST00000397101 CCDC73Q6ZRK6 1079 aa15.08■□□□□ 0
SEC13-205ENST00000397101 ANO5Q75V66 913 aa15.08■□□□□ 0
SEC13-205ENST00000397101 TAS1R1Q7RTX1 841 aa15.08■□□□□ 0
SEC13-205ENST00000397101 KSR1Q8IVT5 923 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms