RNA–Protein interactions for RNA: ENST00000397021.5

MCF2L-206, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-206ENST00000397021 KCNG1Q9UIX4 513 aa10.61□□□□□ -0.71
MCF2L-206ENST00000397021 TBX20Q9UMR3 447 aa10.61□□□□□ -0.71
MCF2L-206ENST00000397021 LZTS1Q9Y250 596 aa10.61□□□□□ -0.71
MCF2L-206ENST00000397021 COL6A3P12111 3177 aa10.61□□□□□ -0.71
MCF2L-206ENST00000397021 TISP43B9A030 160 aa10.6□□□□□ -0.71
MCF2L-206ENST00000397021 H0YCG3 227 aa10.6□□□□□ -0.71
MCF2L-206ENST00000397021 DLL1O00548 723 aa10.6□□□□□ -0.71
MCF2L-206ENST00000397021 POLR2DO15514 142 aaKnown RBP10.6□□□□□ -0.71
MCF2L-206ENST00000397021 TBX10O75333 385 aa10.6□□□□□ -0.71
MCF2L-206ENST00000397021 TOM1L1O75674 476 aa10.6□□□□□ -0.71
MCF2L-206ENST00000397021 MCF2P10911 925 aa10.6□□□□□ -0.71
MCF2L-206ENST00000397021 PROZP22891 400 aa10.6□□□□□ -0.71
MCF2L-206ENST00000397021 IGFBP6P24592 240 aaPredicted RBP10.6□□□□□ -0.71
MCF2L-206ENST00000397021 CASP1P29466 404 aa10.6□□□□□ -0.71
MCF2L-206ENST00000397021 LTBRP36941 435 aa10.6□□□□□ -0.71
MCF2L-206ENST00000397021 GRM5P41594 1212 aa10.6□□□□□ -0.71
MCF2L-206ENST00000397021 LIG4P49917 911 aa10.6□□□□□ -0.71
MCF2L-206ENST00000397021 KRT85P78386 507 aa10.6□□□□□ -0.71
MCF2L-206ENST00000397021 GRIK3Q13003 919 aa10.6□□□□□ -0.71
MCF2L-206ENST00000397021 E2F4Q16254 413 aa10.6□□□□□ -0.71
MCF2L-206ENST00000397021 ATL3Q6DD88 541 aa10.6□□□□□ -0.71
MCF2L-206ENST00000397021 LLGL2Q6P1M3 1020 aa10.6□□□□□ -0.71
MCF2L-206ENST00000397021 DDX53Q86TM3 631 aaKnown RBP10.6□□□□□ -0.71
MCF2L-206ENST00000397021 TMEM130Q8N3G9 435 aa10.6□□□□□ -0.71
MCF2L-206ENST00000397021 VN1R2Q8NFZ6 395 aa10.6□□□□□ -0.71
MCF2L-206ENST00000397021 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.6□□□□□ -0.71
MCF2L-206ENST00000397021 HASPINQ8TF76 798 aa10.6□□□□□ -0.71
MCF2L-206ENST00000397021 LEO1Q8WVC0 666 aaPredicted RBP10.6□□□□□ -0.71
MCF2L-206ENST00000397021 RSPH1Q8WYR4 309 aa10.6□□□□□ -0.71
MCF2L-206ENST00000397021 HPS3Q969F9 1004 aa10.6□□□□□ -0.71
MCF2L-206ENST00000397021 PABPC5Q96DU9 382 aaKnown RBP10.6□□□□□ -0.71
MCF2L-206ENST00000397021 B3GALT6Q96L58 329 aa10.6□□□□□ -0.71
MCF2L-206ENST00000397021 FGFBP2Q9BYJ0 223 aa10.6□□□□□ -0.71
MCF2L-206ENST00000397021 GDPD2Q9HCC8 539 aa10.6□□□□□ -0.71
MCF2L-206ENST00000397021 BARX2Q9UMQ3 279 aaPredicted RBP10.6□□□□□ -0.71
MCF2L-206ENST00000397021 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.59□□□□□ -0.71
MCF2L-206ENST00000397021 C2orf71A6NGG8 1288 aa10.59□□□□□ -0.71
MCF2L-206ENST00000397021 ANKRD63C9JTQ0 380 aa10.59□□□□□ -0.71
MCF2L-206ENST00000397021 C2CD2LO14523 706 aa10.59□□□□□ -0.71
MCF2L-206ENST00000397021 HNRNPDLO14979 420 aaKnown RBP10.59□□□□□ -0.71
MCF2L-206ENST00000397021 CLDN3O15551 220 aa10.59□□□□□ -0.71
MCF2L-206ENST00000397021 MEFVO15553 781 aaPredicted RBP10.59□□□□□ -0.71
MCF2L-206ENST00000397021 GLP2RO95838 553 aa10.59□□□□□ -0.71
MCF2L-206ENST00000397021 THP07101 528 aa10.59□□□□□ -0.71
MCF2L-206ENST00000397021 MYBP10242 640 aa10.59□□□□□ -0.71
MCF2L-206ENST00000397021 BMP1P13497 986 aa10.59□□□□□ -0.71
MCF2L-206ENST00000397021 TNFSF9P41273 254 aa10.59□□□□□ -0.71
MCF2L-206ENST00000397021 NDUFV1P49821 464 aa10.59□□□□□ -0.71
MCF2L-206ENST00000397021 YARSP54577 528 aaKnown RBP10.59□□□□□ -0.71
MCF2L-206ENST00000397021 SPAG1Q07617 926 aa10.59□□□□□ -0.71
MCF2L-206ENST00000397021 KCNA1Q09470 495 aa10.59□□□□□ -0.71
MCF2L-206ENST00000397021 ADAM15Q13444 863 aa10.59□□□□□ -0.71
MCF2L-206ENST00000397021 SMC1AQ14683 1233 aaKnown RBP10.59□□□□□ -0.71
MCF2L-206ENST00000397021 NOLC1Q14978 699 aaKnown RBP eCLIP10.59□□□□□ -0.71
MCF2L-206ENST00000397021 DUSP6Q16828 381 aa10.59□□□□□ -0.71
MCF2L-206ENST00000397021 AAK1Q2M2I8 961 aa10.59□□□□□ -0.71
MCF2L-206ENST00000397021 CTC1Q2NKJ3 1217 aa10.59□□□□□ -0.71
MCF2L-206ENST00000397021 HERC4Q5GLZ8 1057 aaPredicted RBP10.59□□□□□ -0.71
MCF2L-206ENST00000397021 ZBTB41Q5SVQ8 909 aa10.59□□□□□ -0.71
MCF2L-206ENST00000397021 RESP18Q5W5W9 173 aa10.59□□□□□ -0.71
MCF2L-206ENST00000397021 SLC39A4Q6P5W5 647 aa10.59□□□□□ -0.71
MCF2L-206ENST00000397021 ZPBP2Q6X784 338 aa10.59□□□□□ -0.71
MCF2L-206ENST00000397021 APBB1IPQ7Z5R6 666 aaPredicted RBP10.59□□□□□ -0.71
MCF2L-206ENST00000397021 GRAMD1CQ8IYS0 662 aa10.59□□□□□ -0.71
MCF2L-206ENST00000397021 MRPL43Q8N983 215 aaKnown RBP10.59□□□□□ -0.71
MCF2L-206ENST00000397021 PPP2R3CQ969Q6 453 aa10.59□□□□□ -0.71
MCF2L-206ENST00000397021 SPATA32Q96LK8 384 aa10.59□□□□□ -0.71
MCF2L-206ENST00000397021 ACAP3Q96P50 834 aa10.59□□□□□ -0.71
MCF2L-206ENST00000397021 CCDC94Q9BW85 323 aaPredicted RBP10.59□□□□□ -0.71
MCF2L-206ENST00000397021 COLEC11Q9BWP8 271 aa10.59□□□□□ -0.71
MCF2L-206ENST00000397021 APOL5Q9BWW9 433 aa10.59□□□□□ -0.71
MCF2L-206ENST00000397021 ZBP1Q9H171 429 aa10.59□□□□□ -0.71
MCF2L-206ENST00000397021 BLZF1Q9H2G9 400 aa10.59□□□□□ -0.71
MCF2L-206ENST00000397021 MRPL44Q9H9J2 332 aaKnown RBP10.59□□□□□ -0.71
MCF2L-206ENST00000397021 GOLGA2P5Q9HBQ8 144 aa10.59□□□□□ -0.71
MCF2L-206ENST00000397021 NGRNQ9NPE2 291 aaKnown RBP10.59□□□□□ -0.71
MCF2L-206ENST00000397021 PANK4Q9NVE7 773 aa10.59□□□□□ -0.71
MCF2L-206ENST00000397021 FAM13BQ9NYF5 915 aa10.59□□□□□ -0.71
MCF2L-206ENST00000397021 EYSQ5T1H1 3165 aa10.59□□□□□ -0.71
MCF2L-206ENST00000397021 FNDC1Q4ZHG4 1894 aaPredicted RBP10.59□□□□□ -0.71
MCF2L-206ENST00000397021 PRRC2BQ5JSZ5 2229 aaKnown RBP10.58□□□□□ -0.72
MCF2L-206ENST00000397021 SMIM28A0A1B0GU29 152 aa10.58□□□□□ -0.72
MCF2L-206ENST00000397021 A0A1B0GVL5 298 aa10.58□□□□□ -0.72
MCF2L-206ENST00000397021 TULP1O00294 542 aaPredicted RBP10.58□□□□□ -0.72
MCF2L-206ENST00000397021 NR1I2O75469 434 aa10.58□□□□□ -0.72
MCF2L-206ENST00000397021 KIF4AO95239 1232 aa10.58□□□□□ -0.72
MCF2L-206ENST00000397021 GCNT3O95395 438 aa10.58□□□□□ -0.72
MCF2L-206ENST00000397021 CTSAP10619 480 aa10.58□□□□□ -0.72
MCF2L-206ENST00000397021 IL9P15248 144 aa10.58□□□□□ -0.72
MCF2L-206ENST00000397021 AFMP43652 599 aa10.58□□□□□ -0.72
MCF2L-206ENST00000397021 CASP5P51878 434 aa10.58□□□□□ -0.72
MCF2L-206ENST00000397021 GTF2BQ00403 316 aa10.58□□□□□ -0.72
MCF2L-206ENST00000397021 SOX4Q06945 474 aaPredicted RBP10.58□□□□□ -0.72
MCF2L-206ENST00000397021 MCL1Q07820 350 aa10.58□□□□□ -0.72
MCF2L-206ENST00000397021 TUSC3Q13454 348 aa10.58□□□□□ -0.72
MCF2L-206ENST00000397021 HSP90AA2PQ14568 343 aaPredicted RBP10.58□□□□□ -0.72
MCF2L-206ENST00000397021 COL19A1Q14993 1142 aa10.58□□□□□ -0.72
MCF2L-206ENST00000397021 NAB2Q15742 525 aa10.58□□□□□ -0.72
MCF2L-206ENST00000397021 LEXMQ3ZCV2 418 aa10.58□□□□□ -0.72
MCF2L-206ENST00000397021 PTCRAQ6ISU1 281 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms