RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 LAMTOR4Q0VGL1 99 aa16.31■□□□□ 0.2
MCF2L-205ENST00000397017 PLEKHH3Q7Z736 793 aa16.31■□□□□ 0.2
MCF2L-205ENST00000397017 CEP120Q8N960 986 aa16.31■□□□□ 0.2
MCF2L-205ENST00000397017 MKNK1Q9BUB5 465 aa16.31■□□□□ 0.2
MCF2L-205ENST00000397017 GOLGA6BA6NDN3 693 aa16.31■□□□□ 0.2
MCF2L-205ENST00000397017 MMEP08473 750 aa16.31■□□□□ 0.2
MCF2L-205ENST00000397017 PBX1P40424 430 aa16.31■□□□□ 0.2
MCF2L-205ENST00000397017 MED10Q9BTT4 135 aa16.31■□□□□ 0.2
MCF2L-205ENST00000397017 LRRC1Q9BTT6 524 aa16.31■□□□□ 0.2
MCF2L-205ENST00000397017 AGAP1Q9UPQ3 857 aa16.31■□□□□ 0.2
MCF2L-205ENST00000397017 PGRMC1O00264 195 aaKnown RBP16.3■□□□□ 0.2
MCF2L-205ENST00000397017 HBP1O60381 514 aa16.3■□□□□ 0.2
MCF2L-205ENST00000397017 CYP2C9P11712 490 aa16.3■□□□□ 0.2
MCF2L-205ENST00000397017 NOP14P78316 857 aaKnown RBP16.3■□□□□ 0.2
MCF2L-205ENST00000397017 MSANTD4Q8NCY6 345 aa16.3■□□□□ 0.2
MCF2L-205ENST00000397017 TMEM161BQ8NDZ6 487 aa16.3■□□□□ 0.2
MCF2L-205ENST00000397017 RNF25Q96BH1 459 aaPredicted RBP16.3■□□□□ 0.2
MCF2L-205ENST00000397017 SNX12Q9UMY4 172 aa16.3■□□□□ 0.2
MCF2L-205ENST00000397017 A0A1W2PQJ5 194 aa16.3■□□□□ 0.2
MCF2L-205ENST00000397017 RBAK-RBAKDNI3L0D1 243 aa16.3■□□□□ 0.2
MCF2L-205ENST00000397017 KCNA2P16389 499 aa16.3■□□□□ 0.2
MCF2L-205ENST00000397017 BPIFB4P59827 614 aa16.3■□□□□ 0.2
MCF2L-205ENST00000397017 GPC5P78333 572 aa16.3■□□□□ 0.2
MCF2L-205ENST00000397017 ZNF354CQ86Y25 554 aa16.3■□□□□ 0.2
MCF2L-205ENST00000397017 DAW1Q8N136 415 aa16.3■□□□□ 0.2
MCF2L-205ENST00000397017 RPS6KC1Q96S38 1066 aa16.3■□□□□ 0.2
MCF2L-205ENST00000397017 MAK16Q9BXY0 300 aaKnown RBP16.3■□□□□ 0.2
MCF2L-205ENST00000397017 RBPJLQ9UBG7 517 aa16.3■□□□□ 0.2
MCF2L-205ENST00000397017 P4HA1P13674 534 aa16.3■□□□□ 0.2
MCF2L-205ENST00000397017 CAPN2P17655 700 aa16.3■□□□□ 0.2
MCF2L-205ENST00000397017 MXD4Q14582 209 aaPredicted RBP16.3■□□□□ 0.2
MCF2L-205ENST00000397017 NIPA1Q7RTP0 329 aa16.3■□□□□ 0.2
MCF2L-205ENST00000397017 ZNF564Q8TBZ8 553 aaPredicted RBP16.3■□□□□ 0.2
MCF2L-205ENST00000397017 OSMRQ99650 979 aa16.3■□□□□ 0.2
MCF2L-205ENST00000397017 EDEM3Q9BZQ6 932 aa16.3■□□□□ 0.2
MCF2L-205ENST00000397017 HESX1Q9UBX0 185 aa16.3■□□□□ 0.2
MCF2L-205ENST00000397017 PCSK1NQ9UHG2 260 aa16.3■□□□□ 0.2
MCF2L-205ENST00000397017 SPATA31C2B4DYI2 1134 aa16.29■□□□□ 0.2
MCF2L-205ENST00000397017 F8VZ95 297 aa16.29■□□□□ 0.2
MCF2L-205ENST00000397017 GLRA2P23416 452 aa16.29■□□□□ 0.2
MCF2L-205ENST00000397017 PLTPP55058 493 aa16.29■□□□□ 0.2
MCF2L-205ENST00000397017 IER5Q5VY09 327 aa16.29■□□□□ 0.2
MCF2L-205ENST00000397017 OR6B2Q6IFH4 312 aa16.29■□□□□ 0.2
MCF2L-205ENST00000397017 DNAJC24Q6P3W2 148 aa16.29■□□□□ 0.2
MCF2L-205ENST00000397017 KCNV1Q6PIU1 500 aa16.29■□□□□ 0.2
MCF2L-205ENST00000397017 APBB1IPQ7Z5R6 666 aaPredicted RBP16.29■□□□□ 0.2
MCF2L-205ENST00000397017 SPATA4Q8NEY3 305 aa16.29■□□□□ 0.2
MCF2L-205ENST00000397017 RDM1Q8NG50 284 aa16.29■□□□□ 0.2
MCF2L-205ENST00000397017 R3HDMLQ9H3Y0 253 aa16.29■□□□□ 0.2
MCF2L-205ENST00000397017 ZWILCHQ9H900 591 aa16.29■□□□□ 0.2
MCF2L-205ENST00000397017 KIAA1586Q9HCI6 787 aa16.29■□□□□ 0.2
MCF2L-205ENST00000397017 DHX15O43143 795 aaKnown RBP16.29■□□□□ 0.2
MCF2L-205ENST00000397017 EFNA5P52803 228 aa16.29■□□□□ 0.2
MCF2L-205ENST00000397017 HOOK3Q86VS8 718 aa16.29■□□□□ 0.2
MCF2L-205ENST00000397017 TSPYL1Q9H0U9 437 aa16.29■□□□□ 0.2
MCF2L-205ENST00000397017 TMEM8AQ9HCN3 771 aa16.29■□□□□ 0.2
MCF2L-205ENST00000397017 REXO2Q9Y3B8 237 aaKnown RBP16.29■□□□□ 0.2
MCF2L-205ENST00000397017 CXCL8P10145 99 aa16.29■□□□□ 0.2
MCF2L-205ENST00000397017 LAMC2Q13753 1193 aa16.29■□□□□ 0.2
MCF2L-205ENST00000397017 IPO4Q8TEX9 1081 aaKnown RBP16.29■□□□□ 0.2
MCF2L-205ENST00000397017 NAP1L3Q99457 506 aaPredicted RBP16.29■□□□□ 0.2
MCF2L-205ENST00000397017 PAIP2Q9BPZ3 127 aaKnown RBP16.29■□□□□ 0.2
MCF2L-205ENST00000397017 SNX9Q9Y5X1 595 aa16.29■□□□□ 0.2
MCF2L-205ENST00000397017 PI4K2BG5E9Z4 385 aa16.28■□□□□ 0.2
MCF2L-205ENST00000397017 GRAP2O75791 330 aa16.28■□□□□ 0.2
MCF2L-205ENST00000397017 STAM2O75886 525 aa16.28■□□□□ 0.2
MCF2L-205ENST00000397017 PDGFRBP09619 1106 aa16.28■□□□□ 0.2
MCF2L-205ENST00000397017 HOXA7P31268 230 aaPredicted RBP16.28■□□□□ 0.2
MCF2L-205ENST00000397017 ARHGAP25P42331 645 aa16.28■□□□□ 0.2
MCF2L-205ENST00000397017 BRD3Q15059 726 aa16.28■□□□□ 0.2
MCF2L-205ENST00000397017 SEPT7Q16181 437 aaKnown RBP16.28■□□□□ 0.2
MCF2L-205ENST00000397017 PHLDB3Q6NSJ2 640 aa16.28■□□□□ 0.2
MCF2L-205ENST00000397017 ERICH1Q86X53 443 aa16.28■□□□□ 0.2
MCF2L-205ENST00000397017 MBOAT7Q96N66 472 aa16.28■□□□□ 0.2
MCF2L-205ENST00000397017 AMACRQ9UHK6 382 aa16.28■□□□□ 0.2
MCF2L-205ENST00000397017 LRRD1A4D1F6 860 aa16.28■□□□□ 0.2
MCF2L-205ENST00000397017 B4GALT5O43286 388 aa16.28■□□□□ 0.2
MCF2L-205ENST00000397017 EXTL3O43909 919 aa16.28■□□□□ 0.2
MCF2L-205ENST00000397017 NAB2Q15742 525 aa16.28■□□□□ 0.2
MCF2L-205ENST00000397017 PARD3BQ8TEW8 1205 aa16.28■□□□□ 0.2
MCF2L-205ENST00000397017 RNF34Q969K3 372 aa16.28■□□□□ 0.2
MCF2L-205ENST00000397017 CALN1Q9BXU9 219 aa16.28■□□□□ 0.2
MCF2L-205ENST00000397017 BUB1BO60566 1050 aaPredicted RBP16.28■□□□□ 0.2
MCF2L-205ENST00000397017 ATP1A2P50993 1020 aa16.28■□□□□ 0.2
MCF2L-205ENST00000397017 PAK2Q13177 524 aa16.28■□□□□ 0.2
MCF2L-205ENST00000397017 TMEM63BQ5T3F8 832 aa16.28■□□□□ 0.2
MCF2L-205ENST00000397017 MMS22LQ6ZRQ5 1243 aa16.28■□□□□ 0.2
MCF2L-205ENST00000397017 ATP8B4Q8TF62 1192 aa16.28■□□□□ 0.2
MCF2L-205ENST00000397017 ACSF2Q96CM8 615 aaPredicted RBP16.28■□□□□ 0.2
MCF2L-205ENST00000397017 BEGAINQ9BUH8 593 aa16.28■□□□□ 0.2
MCF2L-205ENST00000397017 C2orf40Q9H1Z8 148 aa16.28■□□□□ 0.2
MCF2L-205ENST00000397017 TAS2R14Q9NYV8 317 aa16.28■□□□□ 0.2
MCF2L-205ENST00000397017 ZNF148Q9UQR1 794 aa16.28■□□□□ 0.2
MCF2L-205ENST00000397017 HES2Q9Y543 173 aa16.28■□□□□ 0.2
MCF2L-205ENST00000397017 MORC2Q9Y6X9 1032 aaPredicted RBP16.28■□□□□ 0.2
MCF2L-205ENST00000397017 BRD2P25440 801 aaKnown RBP16.27■□□□□ 0.2
MCF2L-205ENST00000397017 TNFSF9P41273 254 aa16.27■□□□□ 0.2
MCF2L-205ENST00000397017 RGS7P49802 495 aa16.27■□□□□ 0.2
MCF2L-205ENST00000397017 ZBTB41Q5SVQ8 909 aa16.27■□□□□ 0.2
MCF2L-205ENST00000397017 RBBP8NLQ8NC74 664 aaPredicted RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms