RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 CDT1Q9H211 546 aa13.81□□□□□ -0.2
TRIM39-204ENST00000396548 WBP1LQ9NX94 342 aa13.81□□□□□ -0.2
TRIM39-204ENST00000396548 AIPL1Q9NZN9 384 aa13.81□□□□□ -0.2
TRIM39-204ENST00000396548 MYO6Q9UM54 1294 aa13.81□□□□□ -0.2
TRIM39-204ENST00000396548 FHOD1Q9Y613 1164 aa13.81□□□□□ -0.2
TRIM39-204ENST00000396548 A0A1B0GUA9 196 aa13.8□□□□□ -0.2
TRIM39-204ENST00000396548 C4BPAP04003 597 aaKnown RBP13.8□□□□□ -0.2
TRIM39-204ENST00000396548 GNAT1P11488 350 aa13.8□□□□□ -0.2
TRIM39-204ENST00000396548 POLR2FP61218 127 aaKnown RBP13.8□□□□□ -0.2
TRIM39-204ENST00000396548 HSP90AA2PQ14568 343 aaPredicted RBP13.8□□□□□ -0.2
TRIM39-204ENST00000396548 ARHGEF6Q15052 776 aa13.8□□□□□ -0.2
TRIM39-204ENST00000396548 PHLDB3Q6NSJ2 640 aa13.8□□□□□ -0.2
TRIM39-204ENST00000396548 BRSK2Q8IWQ3 736 aa13.8□□□□□ -0.2
TRIM39-204ENST00000396548 TMEM40Q8WWA1 233 aa13.8□□□□□ -0.2
TRIM39-204ENST00000396548 WNT8BQ93098 351 aa13.8□□□□□ -0.2
TRIM39-204ENST00000396548 DAAM1Q9Y4D1 1078 aa13.8□□□□□ -0.2
TRIM39-204ENST00000396548 PDCD11Q14690 1871 aaKnown RBP13.8□□□□□ -0.2
TRIM39-204ENST00000396548 DARSP14868 501 aaKnown RBP13.8□□□□□ -0.2
TRIM39-204ENST00000396548 HSPA6P17066 643 aa13.8□□□□□ -0.2
TRIM39-204ENST00000396548 GRK4P32298 578 aa13.8□□□□□ -0.2
TRIM39-204ENST00000396548 PCBP1Q15365 356 aaKnown RBP eCLIP13.8□□□□□ -0.2
TRIM39-204ENST00000396548 ASTE1Q2TB18 679 aaPredicted RBP13.8□□□□□ -0.2
TRIM39-204ENST00000396548 SEZ6Q53EL9 994 aa13.8□□□□□ -0.2
TRIM39-204ENST00000396548 IQCEQ6IPM2 695 aa13.8□□□□□ -0.2
TRIM39-204ENST00000396548 ZBTB33Q86T24 672 aa13.8□□□□□ -0.2
TRIM39-204ENST00000396548 REXO1L1PQ8IX06 675 aa13.8□□□□□ -0.2
TRIM39-204ENST00000396548 ZNF710Q8N1W2 664 aa13.8□□□□□ -0.2
TRIM39-204ENST00000396548 ZNF397Q8NF99 534 aaPredicted RBP13.8□□□□□ -0.2
TRIM39-204ENST00000396548 FAM49AQ9H0Q0 323 aaPredicted RBP13.8□□□□□ -0.2
TRIM39-204ENST00000396548 RBAKQ9NYW8 714 aaPredicted RBP13.8□□□□□ -0.2
TRIM39-204ENST00000396548 TSKSQ9UJT2 592 aa13.8□□□□□ -0.2
TRIM39-204ENST00000396548 MCF2P10911 925 aa13.79□□□□□ -0.2
TRIM39-204ENST00000396548 CLCN1P35523 988 aa13.79□□□□□ -0.2
TRIM39-204ENST00000396548 POU5F1Q01860 360 aaKnown RBP13.79□□□□□ -0.2
TRIM39-204ENST00000396548 KRT39Q6A163 491 aa13.79□□□□□ -0.2
TRIM39-204ENST00000396548 GJB7Q6PEY0 223 aa13.79□□□□□ -0.2
TRIM39-204ENST00000396548 SV2AQ7L0J3 742 aa13.79□□□□□ -0.2
TRIM39-204ENST00000396548 RRAGAQ7L523 313 aa13.79□□□□□ -0.2
TRIM39-204ENST00000396548 SERINC5Q86VE9 423 aa13.79□□□□□ -0.2
TRIM39-204ENST00000396548 CCDC127Q96BQ5 260 aa13.79□□□□□ -0.2
TRIM39-204ENST00000396548 PDE11AQ9HCR9 933 aa13.79□□□□□ -0.2
TRIM39-204ENST00000396548 ARHGAP20Q9P2F6 1191 aa13.79□□□□□ -0.2
TRIM39-204ENST00000396548 TMEM62Q0P6H9 643 aa13.79□□□□□ -0.2
TRIM39-204ENST00000396548 IRF2BP2Q7Z5L9 587 aa13.79□□□□□ -0.2
TRIM39-204ENST00000396548 PCSK9Q8NBP7 692 aaKnown RBP13.79□□□□□ -0.2
TRIM39-204ENST00000396548 CPB2Q96IY4 423 aa13.79□□□□□ -0.2
TRIM39-204ENST00000396548 CGRRF1Q99675 332 aa13.79□□□□□ -0.2
TRIM39-204ENST00000396548 TSEN34Q9BSV6 310 aaKnown RBP13.79□□□□□ -0.2
TRIM39-204ENST00000396548 NUCKS1Q9H1E3 243 aaKnown RBP13.79□□□□□ -0.2
TRIM39-204ENST00000396548 APEX2Q9UBZ4 518 aa13.79□□□□□ -0.2
TRIM39-204ENST00000396548 VNN1O95497 513 aa13.79□□□□□ -0.2
TRIM39-204ENST00000396548 MXI1P50539 228 aa13.79□□□□□ -0.2
TRIM39-204ENST00000396548 CHMP4BP1P59074 171 aa13.79□□□□□ -0.2
TRIM39-204ENST00000396548 MGAT3Q09327 533 aa13.79□□□□□ -0.2
TRIM39-204ENST00000396548 ENOX2Q16206 610 aaKnown RBP13.79□□□□□ -0.2
TRIM39-204ENST00000396548 ZACNQ401N2 412 aa13.79□□□□□ -0.2
TRIM39-204ENST00000396548 TAF2Q6P1X5 1199 aa13.79□□□□□ -0.2
TRIM39-204ENST00000396548 TMEM192Q8IY95 271 aa13.79□□□□□ -0.2
TRIM39-204ENST00000396548 DNAJC5GQ8N7S2 189 aa13.79□□□□□ -0.2
TRIM39-204ENST00000396548 SLC43A3Q8NBI5 491 aa13.79□□□□□ -0.2
TRIM39-204ENST00000396548 OLIG1Q8TAK6 271 aa13.79□□□□□ -0.2
TRIM39-204ENST00000396548 GCOM2Q9BZD3 368 aaPredicted RBP13.79□□□□□ -0.2
TRIM39-204ENST00000396548 NLRC4Q9NPP4 1024 aa13.79□□□□□ -0.2
TRIM39-204ENST00000396548 REXO2Q9Y3B8 237 aaKnown RBP13.79□□□□□ -0.2
TRIM39-204ENST00000396548 ADGRG1Q9Y653 693 aa13.79□□□□□ -0.2
TRIM39-204ENST00000396548 LCA5LO95447 670 aa13.78□□□□□ -0.2
TRIM39-204ENST00000396548 ACLYP53396 1101 aa13.78□□□□□ -0.2
TRIM39-204ENST00000396548 CRYBB1P53674 252 aaPredicted RBP13.78□□□□□ -0.2
TRIM39-204ENST00000396548 MAPK8IP2Q13387 824 aaPredicted RBP13.78□□□□□ -0.2
TRIM39-204ENST00000396548 PPP1R13BQ96KQ4 1090 aa13.78□□□□□ -0.2
TRIM39-204ENST00000396548 PTPN22Q9Y2R2 807 aa13.78□□□□□ -0.2
TRIM39-204ENST00000396548 PLEKP08567 350 aaPredicted RBP13.78□□□□□ -0.2
TRIM39-204ENST00000396548 FGFR4P22455 802 aa13.78□□□□□ -0.2
TRIM39-204ENST00000396548 SNX17Q15036 470 aa13.78□□□□□ -0.2
TRIM39-204ENST00000396548 ZNF568Q3ZCX4 644 aa13.78□□□□□ -0.2
TRIM39-204ENST00000396548 TDRD10Q5VZ19 366 aaKnown RBP13.78□□□□□ -0.2
TRIM39-204ENST00000396548 SCARA3Q6AZY7 606 aa13.78□□□□□ -0.2
TRIM39-204ENST00000396548 NYAP1Q6ZVC0 841 aa13.78□□□□□ -0.2
TRIM39-204ENST00000396548 CDR2LQ86X02 465 aaPredicted RBP13.78□□□□□ -0.2
TRIM39-204ENST00000396548 ARHGEF19Q8IW93 802 aa13.78□□□□□ -0.2
TRIM39-204ENST00000396548 CEP120Q8N960 986 aa13.78□□□□□ -0.2
TRIM39-204ENST00000396548 FAM84AQ96KN4 292 aa13.78□□□□□ -0.2
TRIM39-204ENST00000396548 OSMRQ99650 979 aa13.78□□□□□ -0.2
TRIM39-204ENST00000396548 HMX1Q9NP08 348 aaPredicted RBP13.78□□□□□ -0.2
TRIM39-204ENST00000396548 TRIM17Q9Y577 477 aa13.78□□□□□ -0.2
TRIM39-204ENST00000396548 EIF4BP23588 611 aaKnown RBP13.77□□□□□ -0.2
TRIM39-204ENST00000396548 USP37Q86T82 979 aa13.77□□□□□ -0.2
TRIM39-204ENST00000396548 RNF180Q86T96 592 aa13.77□□□□□ -0.2
TRIM39-204ENST00000396548 TAS1R2Q8TE23 839 aa13.77□□□□□ -0.2
TRIM39-204ENST00000396548 STK33Q9BYT3 514 aa13.77□□□□□ -0.2
TRIM39-204ENST00000396548 NHEJ1Q9H9Q4 299 aaPredicted RBP13.77□□□□□ -0.2
TRIM39-204ENST00000396548 PPP2R2CQ9Y2T4 447 aa13.77□□□□□ -0.2
TRIM39-204ENST00000396548 NRDCO43847 1150 aa13.77□□□□□ -0.21
TRIM39-204ENST00000396548 CABYRO75952 493 aa13.77□□□□□ -0.21
TRIM39-204ENST00000396548 DLATP10515 647 aaKnown RBP13.77□□□□□ -0.21
TRIM39-204ENST00000396548 RFX1P22670 979 aa13.77□□□□□ -0.21
TRIM39-204ENST00000396548 PTPN11Q06124 597 aaPredicted RBP13.77□□□□□ -0.21
TRIM39-204ENST00000396548 TRIM71Q2Q1W2 868 aaKnown RBP13.77□□□□□ -0.21
TRIM39-204ENST00000396548 CACNA2D4Q7Z3S7 1137 aa13.77□□□□□ -0.21
TRIM39-204ENST00000396548 OR5B17Q8NGF7 314 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms