RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 PDE12Q6L8Q7 609 aaKnown RBP19.14■□□□□ 0.65
TNFSF13-205ENST00000396545 LRRC55Q6ZSA7 311 aa19.14■□□□□ 0.65
TNFSF13-205ENST00000396545 UNC13DQ70J99 1090 aa19.14■□□□□ 0.65
TNFSF13-205ENST00000396545 KCNK18Q7Z418 384 aa19.14■□□□□ 0.65
TNFSF13-205ENST00000396545 VN1R2Q8NFZ6 395 aa19.14■□□□□ 0.65
TNFSF13-205ENST00000396545 CDCA3Q99618 268 aaPredicted RBP19.14■□□□□ 0.65
TNFSF13-205ENST00000396545 LZTS1Q9Y250 596 aa19.14■□□□□ 0.65
TNFSF13-205ENST00000396545 USP15Q9Y4E8 981 aaPredicted RBP19.14■□□□□ 0.65
TNFSF13-205ENST00000396545 TECTAO75443 2155 aa19.13■□□□□ 0.65
TNFSF13-205ENST00000396545 PSMA7O14818 248 aa19.13■□□□□ 0.65
TNFSF13-205ENST00000396545 P4HBP07237 508 aaKnown RBP19.13■□□□□ 0.65
TNFSF13-205ENST00000396545 DARSP14868 501 aaKnown RBP19.13■□□□□ 0.65
TNFSF13-205ENST00000396545 PBX1P40424 430 aa19.13■□□□□ 0.65
TNFSF13-205ENST00000396545 TERF1P54274 439 aa19.13■□□□□ 0.65
TNFSF13-205ENST00000396545 RBM10P98175 930 aaKnown RBP19.13■□□□□ 0.65
TNFSF13-205ENST00000396545 PLCB3Q01970 1234 aa19.13■□□□□ 0.65
TNFSF13-205ENST00000396545 TARBP2Q15633 366 aaKnown RBP19.13■□□□□ 0.65
TNFSF13-205ENST00000396545 DUSP6Q16828 381 aa19.13■□□□□ 0.65
TNFSF13-205ENST00000396545 TPD52L1Q16890 204 aaPredicted RBP19.13■□□□□ 0.65
TNFSF13-205ENST00000396545 MIER3Q7Z3K6 550 aa19.13■□□□□ 0.65
TNFSF13-205ENST00000396545 LRRC43Q8N309 656 aa19.13■□□□□ 0.65
TNFSF13-205ENST00000396545 NACC1Q96RE7 527 aa19.13■□□□□ 0.65
TNFSF13-205ENST00000396545 LOC730098B7Z3J9 87 aa19.12■□□□□ 0.65
TNFSF13-205ENST00000396545 DKC1O60832 514 aaKnown RBP eCLIP19.12■□□□□ 0.65
TNFSF13-205ENST00000396545 SLITRK3O94933 977 aa19.12■□□□□ 0.65
TNFSF13-205ENST00000396545 PLA2G4BP0C869 781 aa19.12■□□□□ 0.65
TNFSF13-205ENST00000396545 ZSCAN20P17040 1043 aaPredicted RBP19.12■□□□□ 0.65
TNFSF13-205ENST00000396545 EHHADHQ08426 723 aa19.12■□□□□ 0.65
TNFSF13-205ENST00000396545 TBC1D8BQ0IIM8 1120 aa19.12■□□□□ 0.65
TNFSF13-205ENST00000396545 SPECC1LQ69YQ0 1117 aa19.12■□□□□ 0.65
TNFSF13-205ENST00000396545 TTI2Q6NXR4 508 aa19.12■□□□□ 0.65
TNFSF13-205ENST00000396545 HFE2Q6ZVN8 426 aa19.12■□□□□ 0.65
TNFSF13-205ENST00000396545 ECHDC2Q86YB7 292 aa19.12■□□□□ 0.65
TNFSF13-205ENST00000396545 SYT2Q8N9I0 419 aaPredicted RBP19.12■□□□□ 0.65
TNFSF13-205ENST00000396545 ZNF668Q96K58 619 aaPredicted RBP19.12■□□□□ 0.65
TNFSF13-205ENST00000396545 PSMD2Q13200 908 aa19.11■□□□□ 0.65
TNFSF13-205ENST00000396545 KCNC3Q14003 757 aa19.11■□□□□ 0.65
TNFSF13-205ENST00000396545 CBX2Q14781 532 aaPredicted RBP19.11■□□□□ 0.65
TNFSF13-205ENST00000396545 CLLU1OSQ5K130 101 aa19.11■□□□□ 0.65
TNFSF13-205ENST00000396545 CCDC112Q8NEF3 446 aa19.11■□□□□ 0.65
TNFSF13-205ENST00000396545 NOC3LQ8WTT2 800 aaKnown RBP19.11■□□□□ 0.65
TNFSF13-205ENST00000396545 THAP9Q9H5L6 903 aa19.11■□□□□ 0.65
TNFSF13-205ENST00000396545 ZSWIM4Q9H7M6 989 aa19.11■□□□□ 0.65
TNFSF13-205ENST00000396545 KCND2Q9NZV8 630 aa19.11■□□□□ 0.65
TNFSF13-205ENST00000396545 MAPK8IP1Q9UQF2 711 aa19.11■□□□□ 0.65
TNFSF13-205ENST00000396545 A0A0U1RQF3 1178 aa19.1■□□□□ 0.65
TNFSF13-205ENST00000396545 LYPLA2O95372 231 aa19.1■□□□□ 0.65
TNFSF13-205ENST00000396545 CCNE1P24864 410 aa19.1■□□□□ 0.65
TNFSF13-205ENST00000396545 PMS1P54277 932 aaKnown RBP19.1■□□□□ 0.65
TNFSF13-205ENST00000396545 SLC12A3P55017 1021 aa19.1■□□□□ 0.65
TNFSF13-205ENST00000396545 STK4Q13043 487 aa19.1■□□□□ 0.65
TNFSF13-205ENST00000396545 DRP2Q13474 957 aa19.1■□□□□ 0.65
TNFSF13-205ENST00000396545 FILIP1LQ4L180 1135 aa19.1■□□□□ 0.65
TNFSF13-205ENST00000396545 TCP11X2Q5H9J9 407 aa19.1■□□□□ 0.65
TNFSF13-205ENST00000396545 POTEGQ6S5H5 508 aa19.1■□□□□ 0.65
TNFSF13-205ENST00000396545 KCNT2Q6UVM3 1135 aa19.1■□□□□ 0.65
TNFSF13-205ENST00000396545 ZNF598Q86UK7 904 aaKnown RBP19.1■□□□□ 0.65
TNFSF13-205ENST00000396545 ABI1Q8IZP0 508 aa19.1■□□□□ 0.65
TNFSF13-205ENST00000396545 SUSD6Q92537 303 aa19.1■□□□□ 0.65
TNFSF13-205ENST00000396545 SCLT1Q96NL6 688 aa19.1■□□□□ 0.65
TNFSF13-205ENST00000396545 CEP89Q96ST8 783 aa19.1■□□□□ 0.65
TNFSF13-205ENST00000396545 NIFKQ9BYG3 293 aaKnown RBP19.1■□□□□ 0.65
TNFSF13-205ENST00000396545 STBD1O95210 358 aa19.1■□□□□ 0.65
TNFSF13-205ENST00000396545 ATF7P17544 494 aaPredicted RBP19.1■□□□□ 0.65
TNFSF13-205ENST00000396545 PPM1AP35813 382 aa19.1■□□□□ 0.65
TNFSF13-205ENST00000396545 PBX3P40426 434 aa19.1■□□□□ 0.65
TNFSF13-205ENST00000396545 KRT31Q15323 416 aa19.1■□□□□ 0.65
TNFSF13-205ENST00000396545 XKR3Q5GH77 459 aa19.1■□□□□ 0.65
TNFSF13-205ENST00000396545 PLPP4Q5VZY2 271 aa19.1■□□□□ 0.65
TNFSF13-205ENST00000396545 TMEM184AQ6ZMB5 413 aa19.1■□□□□ 0.65
TNFSF13-205ENST00000396545 IRF2BP1Q8IU81 584 aa19.1■□□□□ 0.65
TNFSF13-205ENST00000396545 TPH2Q8IWU9 490 aa19.1■□□□□ 0.65
TNFSF13-205ENST00000396545 KIAA0895Q8NCT3 520 aa19.1■□□□□ 0.65
TNFSF13-205ENST00000396545 NLRP7Q8WX94 980 aa19.1■□□□□ 0.65
TNFSF13-205ENST00000396545 DDX12PQ92771 950 aa19.1■□□□□ 0.65
TNFSF13-205ENST00000396545 EDAQ92838 391 aa19.1■□□□□ 0.65
TNFSF13-205ENST00000396545 DYDC2Q96IM9 177 aa19.1■□□□□ 0.65
TNFSF13-205ENST00000396545 ZNF558Q96NG5 402 aa19.1■□□□□ 0.65
TNFSF13-205ENST00000396545 DUSP9Q99956 384 aaKnown RBP19.1■□□□□ 0.65
TNFSF13-205ENST00000396545 TCF25Q9BQ70 676 aa19.1■□□□□ 0.65
TNFSF13-205ENST00000396545 PHF7Q9BWX1 381 aaPredicted RBP19.1■□□□□ 0.65
TNFSF13-205ENST00000396545 SEPT9Q9UHD8 586 aaPredicted RBP19.1■□□□□ 0.65
TNFSF13-205ENST00000396545 PUF60Q9UHX1 559 aaKnown RBP19.1■□□□□ 0.65
TNFSF13-205ENST00000396545 ITIH6Q6UXX5 1313 aa19.09■□□□□ 0.65
TNFSF13-205ENST00000396545 IGKV6-21A0A0C4DH24 114 aa19.09■□□□□ 0.65
TNFSF13-205ENST00000396545 BICDL2A1A5D9 508 aa19.09■□□□□ 0.65
TNFSF13-205ENST00000396545 TMEM150BA6NC51 233 aa19.09■□□□□ 0.65
TNFSF13-205ENST00000396545 TRIM49BA6NDI0 452 aa19.09■□□□□ 0.65
TNFSF13-205ENST00000396545 KCNJ18B7U540 433 aa19.09■□□□□ 0.65
TNFSF13-205ENST00000396545 E9PMD0 336 aa19.09■□□□□ 0.65
TNFSF13-205ENST00000396545 TEX33O43247 280 aa19.09■□□□□ 0.65
TNFSF13-205ENST00000396545 NRDCO43847 1150 aa19.09■□□□□ 0.65
TNFSF13-205ENST00000396545 FGFR4P22455 802 aa19.09■□□□□ 0.65
TNFSF13-205ENST00000396545 QARSP47897 775 aaKnown RBP19.09■□□□□ 0.65
TNFSF13-205ENST00000396545 CYP4A11Q02928 519 aa19.09■□□□□ 0.65
TNFSF13-205ENST00000396545 KCNJ12Q14500 433 aa19.09■□□□□ 0.65
TNFSF13-205ENST00000396545 CCDC65Q8IXS2 484 aa19.09■□□□□ 0.65
TNFSF13-205ENST00000396545 RNF169Q8NCN4 708 aa19.09■□□□□ 0.65
TNFSF13-205ENST00000396545 DNAJC19Q96DA6 116 aa19.09■□□□□ 0.65
TNFSF13-205ENST00000396545 KCNH6Q9H252 994 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms