RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 GPRC5AQ8NFJ5 357 aa17.38■□□□□ 0.37
SNX6-202ENST00000396526 SEMA4DQ92854 862 aa17.38■□□□□ 0.37
SNX6-202ENST00000396526 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.38■□□□□ 0.376e-7■■□□□ 14
SNX6-202ENST00000396526 ISCUQ9H1K1 167 aa17.38■□□□□ 0.37
SNX6-202ENST00000396526 TRPC6Q9Y210 931 aa17.38■□□□□ 0.37
SNX6-202ENST00000396526 OAS2P29728 719 aaKnown RBP17.37■□□□□ 0.37
SNX6-202ENST00000396526 RNASE9P60153 205 aaKnown RBP17.37■□□□□ 0.37
SNX6-202ENST00000396526 SURF1Q15526 300 aa17.37■□□□□ 0.37
SNX6-202ENST00000396526 MAPK6Q16659 721 aa17.37■□□□□ 0.37
SNX6-202ENST00000396526 TAS1R3Q7RTX0 852 aa17.37■□□□□ 0.37
SNX6-202ENST00000396526 UBL4BQ8N7F7 174 aa17.37■□□□□ 0.37
SNX6-202ENST00000396526 GOLGA6L1Q8N7Z2 621 aa17.37■□□□□ 0.37
SNX6-202ENST00000396526 EPS8L1Q8TE68 723 aa17.37■□□□□ 0.37
SNX6-202ENST00000396526 MORC4Q8TE76 937 aa17.37■□□□□ 0.37
SNX6-202ENST00000396526 BUB1BO60566 1050 aaPredicted RBP17.37■□□□□ 0.37
SNX6-202ENST00000396526 ZMYND10O75800 440 aa17.37■□□□□ 0.37
SNX6-202ENST00000396526 ACOT2P49753 483 aa17.37■□□□□ 0.37
SNX6-202ENST00000396526 Q3C1V9 767 aa17.37■□□□□ 0.37
SNX6-202ENST00000396526 SLC20A1Q8WUM9 679 aa17.37■□□□□ 0.37
SNX6-202ENST00000396526 PRPF31Q8WWY3 499 aaKnown RBP17.37■□□□□ 0.37
SNX6-202ENST00000396526 KREMEN1Q96MU8 473 aa17.37■□□□□ 0.37
SNX6-202ENST00000396526 PCYT2Q99447 389 aa17.37■□□□□ 0.37
SNX6-202ENST00000396526 THAP2Q9H0W7 228 aa17.37■□□□□ 0.37
SNX6-202ENST00000396526 TAF1DQ9H5J8 278 aaPredicted RBP17.37■□□□□ 0.37
SNX6-202ENST00000396526 TXNRD2Q9NNW7 524 aa17.37■□□□□ 0.37
SNX6-202ENST00000396526 TOPORSQ9NS56 1045 aaPredicted RBP17.37■□□□□ 0.37
SNX6-202ENST00000396526 MIF4GDA9UHW6 222 aaKnown RBP17.37■□□□□ 0.37
SNX6-202ENST00000396526 POLR3GO15318 223 aaPredicted RBP17.37■□□□□ 0.37
SNX6-202ENST00000396526 SGPL1O95470 568 aa17.37■□□□□ 0.37
SNX6-202ENST00000396526 CETPP11597 493 aa17.37■□□□□ 0.37
SNX6-202ENST00000396526 MARK3P27448 753 aa17.37■□□□□ 0.37
SNX6-202ENST00000396526 CDR2Q01850 454 aa17.37■□□□□ 0.37
SNX6-202ENST00000396526 NT5DC3Q86UY8 548 aa17.37■□□□□ 0.37
SNX6-202ENST00000396526 DNAAF5Q86Y56 855 aa17.37■□□□□ 0.37
SNX6-202ENST00000396526 HELQQ8TDG4 1101 aa17.37■□□□□ 0.37
SNX6-202ENST00000396526 GPR20Q99678 358 aa17.37■□□□□ 0.37
SNX6-202ENST00000396526 ZNF408Q9H9D4 720 aa17.37■□□□□ 0.37
SNX6-202ENST00000396526 MED4Q9NPJ6 270 aa17.37■□□□□ 0.37
SNX6-202ENST00000396526 GOLGA6L10A0A0M3HER8 536 aa17.36■□□□□ 0.37
SNX6-202ENST00000396526 HBP1O60381 514 aa17.36■□□□□ 0.37
SNX6-202ENST00000396526 CYP11B1P15538 503 aa17.36■□□□□ 0.37
SNX6-202ENST00000396526 EPHB4P54760 987 aa17.36■□□□□ 0.37
SNX6-202ENST00000396526 LDLRAD1Q5T700 205 aa17.36■□□□□ 0.37
SNX6-202ENST00000396526 EMBQ6PCB8 327 aa17.36■□□□□ 0.37
SNX6-202ENST00000396526 CCDC26Q8TAB7 109 aa17.36■□□□□ 0.37
SNX6-202ENST00000396526 DHX38Q92620 1227 aaKnown RBP17.36■□□□□ 0.37
SNX6-202ENST00000396526 KAT5Q92993 513 aa17.36■□□□□ 0.37
SNX6-202ENST00000396526 KRT12Q99456 494 aa17.36■□□□□ 0.37
SNX6-202ENST00000396526 SMARCAL1Q9NZC9 954 aa17.36■□□□□ 0.37
SNX6-202ENST00000396526 EHD2Q9NZN4 543 aa17.36■□□□□ 0.37
SNX6-202ENST00000396526 DNAJC25-GNG10A0A024R161 153 aa17.36■□□□□ 0.37
SNX6-202ENST00000396526 HADHBP55084 474 aaKnown RBP17.36■□□□□ 0.37
SNX6-202ENST00000396526 PAK2Q13177 524 aa17.36■□□□□ 0.37
SNX6-202ENST00000396526 ZACNQ401N2 412 aa17.36■□□□□ 0.37
SNX6-202ENST00000396526 METTL13Q8N6R0 699 aa17.36■□□□□ 0.37
SNX6-202ENST00000396526 A0A0B4J269 797 aa17.36■□□□□ 0.37
SNX6-202ENST00000396526 ASAP2O43150 1006 aa17.36■□□□□ 0.37
SNX6-202ENST00000396526 LGR5O75473 907 aa17.36■□□□□ 0.37
SNX6-202ENST00000396526 HARSP12081 509 aaKnown RBP17.36■□□□□ 0.37
SNX6-202ENST00000396526 CAPSQ13938 189 aa17.36■□□□□ 0.37
SNX6-202ENST00000396526 ZNF677Q86XU0 584 aa17.36■□□□□ 0.37
SNX6-202ENST00000396526 PDE11AQ9HCR9 933 aa17.36■□□□□ 0.37
SNX6-202ENST00000396526 OSGEPQ9NPF4 335 aa17.36■□□□□ 0.37
SNX6-202ENST00000396526 KRIT1O00522 736 aa17.35■□□□□ 0.37
SNX6-202ENST00000396526 TOM1L1O75674 476 aa17.35■□□□□ 0.37
SNX6-202ENST00000396526 HLA-DRAP01903 254 aa17.35■□□□□ 0.37
SNX6-202ENST00000396526 SRGAP2CP0DJJ0 459 aa17.35■□□□□ 0.37
SNX6-202ENST00000396526 TBXAS1P24557 533 aaPredicted RBP17.35■□□□□ 0.37
SNX6-202ENST00000396526 MAATS1Q7Z4T9 603 aa17.35■□□□□ 0.37
SNX6-202ENST00000396526 GOLPH3Q9H4A6 298 aa17.35■□□□□ 0.37
SNX6-202ENST00000396526 DMGDHQ9UI17 866 aaKnown RBP17.35■□□□□ 0.37
SNX6-202ENST00000396526 NLRP11P59045 1033 aaKnown RBP17.35■□□□□ 0.37
SNX6-202ENST00000396526 SLC7A5Q01650 507 aa17.35■□□□□ 0.37
SNX6-202ENST00000396526 PPP1R2P3Q6NXS1 205 aa17.35■□□□□ 0.37
SNX6-202ENST00000396526 NOP9Q86U38 636 aaKnown RBP17.35■□□□□ 0.37
SNX6-202ENST00000396526 FBXO16Q8IX29 292 aaPredicted RBP17.35■□□□□ 0.37
SNX6-202ENST00000396526 RNF149Q8NC42 400 aa17.35■□□□□ 0.37
SNX6-202ENST00000396526 TRIM11Q96F44 468 aa17.35■□□□□ 0.37
SNX6-202ENST00000396526 HES6Q96HZ4 224 aa17.35■□□□□ 0.37
SNX6-202ENST00000396526 CEP89Q96ST8 783 aa17.35■□□□□ 0.37
SNX6-202ENST00000396526 PCDHB2Q9Y5E7 798 aa17.35■□□□□ 0.37
SNX6-202ENST00000396526 HEXIM1O94992 359 aaKnown RBP17.34■□□□□ 0.37
SNX6-202ENST00000396526 CLDN10P78369 228 aa17.34■□□□□ 0.37
SNX6-202ENST00000396526 LAMC2Q13753 1193 aa17.34■□□□□ 0.37
SNX6-202ENST00000396526 HSDL1Q3SXM5 330 aa17.34■□□□□ 0.37
SNX6-202ENST00000396526 GPAT2Q6NUI2 795 aa17.34■□□□□ 0.37
SNX6-202ENST00000396526 SLC47A2Q86VL8 602 aa17.34■□□□□ 0.37
SNX6-202ENST00000396526 KLHL7Q8IXQ5 586 aa17.34■□□□□ 0.37
SNX6-202ENST00000396526 TATDN2Q93075 761 aa17.34■□□□□ 0.37
SNX6-202ENST00000396526 RUFY1Q96T51 708 aa17.34■□□□□ 0.37
SNX6-202ENST00000396526 CGRRF1Q99675 332 aa17.34■□□□□ 0.37
SNX6-202ENST00000396526 PLVAPQ9BX97 442 aa17.34■□□□□ 0.37
SNX6-202ENST00000396526 CARD9Q9H257 536 aa17.34■□□□□ 0.37
SNX6-202ENST00000396526 TAS2R14Q9NYV8 317 aa17.34■□□□□ 0.37
SNX6-202ENST00000396526 UVRAGQ9P2Y5 699 aa17.34■□□□□ 0.37
SNX6-202ENST00000396526 GCLCP48506 637 aaPredicted RBP17.34■□□□□ 0.37
SNX6-202ENST00000396526 GTF2A2P52657 109 aa17.34■□□□□ 0.37
SNX6-202ENST00000396526 ERAP1Q9NZ08 941 aa17.34■□□□□ 0.37
SNX6-202ENST00000396526 NOCTQ9UK39 431 aaKnown RBP17.34■□□□□ 0.37
SNX6-202ENST00000396526 STRNO43815 780 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms