RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 HARSP12081 509 aaKnown RBP13.1□□□□□ -0.31
ITGB1-202ENST00000396033 TNNI1P19237 187 aa13.1□□□□□ -0.31
ITGB1-202ENST00000396033 RPS6KA1Q15418 735 aa13.1□□□□□ -0.31
ITGB1-202ENST00000396033 CFAP221Q4G0U5 840 aa13.1□□□□□ -0.31
ITGB1-202ENST00000396033 IER5Q5VY09 327 aa13.1□□□□□ -0.31
ITGB1-202ENST00000396033 CCDC70Q6NSX1 233 aa13.1□□□□□ -0.31
ITGB1-202ENST00000396033 FAM71AQ8IYT1 594 aa13.1□□□□□ -0.31
ITGB1-202ENST00000396033 LRRC71Q8N4P6 559 aa13.1□□□□□ -0.31
ITGB1-202ENST00000396033 LMBR1Q8WVP7 490 aa13.1□□□□□ -0.31
ITGB1-202ENST00000396033 TCP11Q8WWU5 503 aa13.1□□□□□ -0.31
ITGB1-202ENST00000396033 SHC3Q92529 594 aa13.1□□□□□ -0.31
ITGB1-202ENST00000396033 ELMO3Q96BJ8 720 aa13.1□□□□□ -0.31
ITGB1-202ENST00000396033 MS4A14Q96JA4 679 aa13.1□□□□□ -0.31
ITGB1-202ENST00000396033 MS4A4AQ96JQ5 239 aa13.1□□□□□ -0.31
ITGB1-202ENST00000396033 RBAKQ9NYW8 714 aaPredicted RBP13.1□□□□□ -0.31
ITGB1-202ENST00000396033 SGPL1O95470 568 aa13.09□□□□□ -0.31
ITGB1-202ENST00000396033 TBC1D8O95759 1140 aa13.09□□□□□ -0.31
ITGB1-202ENST00000396033 ADORA2AP29274 412 aa13.09□□□□□ -0.31
ITGB1-202ENST00000396033 ITIH3Q06033 890 aa13.09□□□□□ -0.31
ITGB1-202ENST00000396033 PTPROQ16827 1216 aa13.09□□□□□ -0.31
ITGB1-202ENST00000396033 HNRNPLLQ8WVV9 542 aaKnown RBP13.09□□□□□ -0.31
ITGB1-202ENST00000396033 RFFLQ8WZ73 363 aa13.09□□□□□ -0.31
ITGB1-202ENST00000396033 TRIM66O15016 1216 aa13.09□□□□□ -0.31
ITGB1-202ENST00000396033 CYP26A1O43174 497 aa13.09□□□□□ -0.31
ITGB1-202ENST00000396033 ATP8B1O43520 1251 aa13.09□□□□□ -0.31
ITGB1-202ENST00000396033 GAS2O43903 313 aaKnown RBP13.09□□□□□ -0.31
ITGB1-202ENST00000396033 WDR93Q6P2C0 686 aa13.09□□□□□ -0.31
ITGB1-202ENST00000396033 EPS8L1Q8TE68 723 aa13.09□□□□□ -0.31
ITGB1-202ENST00000396033 BRI3BPQ8WY22 251 aa13.09□□□□□ -0.31
ITGB1-202ENST00000396033 PI4K2AQ9BTU6 479 aa13.09□□□□□ -0.31
ITGB1-202ENST00000396033 SMARCAD1Q9H4L7 1026 aa13.09□□□□□ -0.31
ITGB1-202ENST00000396033 PDE11AQ9HCR9 933 aa13.09□□□□□ -0.31
ITGB1-202ENST00000396033 ABCB6Q9NP58 842 aa13.09□□□□□ -0.31
ITGB1-202ENST00000396033 RNF14Q9UBS8 474 aa13.09□□□□□ -0.31
ITGB1-202ENST00000396033 SLC45A1Q9Y2W3 748 aa13.09□□□□□ -0.31
ITGB1-202ENST00000396033 TARSL2A2RTX5 802 aaKnown RBP13.09□□□□□ -0.31
ITGB1-202ENST00000396033 ZBTB42B2RXF5 422 aa13.09□□□□□ -0.31
ITGB1-202ENST00000396033 LDHAP00338 332 aaKnown RBP13.09□□□□□ -0.31
ITGB1-202ENST00000396033 GYS2P54840 703 aa13.09□□□□□ -0.31
ITGB1-202ENST00000396033 DAAM2Q86T65 1068 aa13.09□□□□□ -0.31
ITGB1-202ENST00000396033 EXOC8Q8IYI6 725 aa13.09□□□□□ -0.31
ITGB1-202ENST00000396033 SYCE1Q8N0S2 351 aa13.09□□□□□ -0.31
ITGB1-202ENST00000396033 MMGT1Q8N4V1 131 aa13.09□□□□□ -0.31
ITGB1-202ENST00000396033 C1orf112Q9NSG2 853 aa13.09□□□□□ -0.31
ITGB1-202ENST00000396033 KIF4AO95239 1232 aa13.08□□□□□ -0.31
ITGB1-202ENST00000396033 SRGAP2CP0DJJ0 459 aa13.08□□□□□ -0.31
ITGB1-202ENST00000396033 MCM3P25205 808 aa13.08□□□□□ -0.31
ITGB1-202ENST00000396033 EFNA5P52803 228 aa13.08□□□□□ -0.31
ITGB1-202ENST00000396033 WNT7BP56706 349 aa13.08□□□□□ -0.31
ITGB1-202ENST00000396033 LAMTOR4Q0VGL1 99 aa13.08□□□□□ -0.31
ITGB1-202ENST00000396033 BIRC3Q13489 604 aa13.08□□□□□ -0.31
ITGB1-202ENST00000396033 PRPF4BQ13523 1007 aaKnown RBP13.08□□□□□ -0.31
ITGB1-202ENST00000396033 ZBTB41Q5SVQ8 909 aa13.08□□□□□ -0.31
ITGB1-202ENST00000396033 CRELD2Q6UXH1 353 aaPredicted RBP13.08□□□□□ -0.31
ITGB1-202ENST00000396033 NOP9Q86U38 636 aaKnown RBP13.08□□□□□ -0.31
ITGB1-202ENST00000396033 ZBTB8OSQ8IWT0 167 aa13.08□□□□□ -0.31
ITGB1-202ENST00000396033 SLC35G2Q8TBE7 412 aa13.08□□□□□ -0.31
ITGB1-202ENST00000396033 ZNF516Q92618 1163 aa13.08□□□□□ -0.31
ITGB1-202ENST00000396033 TATDN2Q93075 761 aa13.08□□□□□ -0.31
ITGB1-202ENST00000396033 THAP2Q9H0W7 228 aa13.08□□□□□ -0.31
ITGB1-202ENST00000396033 GBA2Q9HCG7 927 aaPredicted RBP13.08□□□□□ -0.31
ITGB1-202ENST00000396033 OSGEPQ9NPF4 335 aa13.08□□□□□ -0.31
ITGB1-202ENST00000396033 IVNS1ABPQ9Y6Y0 642 aa13.08□□□□□ -0.31
ITGB1-202ENST00000396033 PLXNB2O15031 1838 aa13.08□□□□□ -0.32
ITGB1-202ENST00000396033 A0A0B4J269 797 aa13.08□□□□□ -0.32
ITGB1-202ENST00000396033 ANKRD62A6NC57 917 aa13.08□□□□□ -0.32
ITGB1-202ENST00000396033 KCNK3O14649 394 aa13.08□□□□□ -0.32
ITGB1-202ENST00000396033 PIK3CAP42336 1068 aa13.08□□□□□ -0.32
ITGB1-202ENST00000396033 SLC26A2P50443 739 aa13.08□□□□□ -0.32
ITGB1-202ENST00000396033 MKRN4PQ13434 485 aaPredicted RBP13.08□□□□□ -0.32
ITGB1-202ENST00000396033 MXD4Q14582 209 aaPredicted RBP13.08□□□□□ -0.32
ITGB1-202ENST00000396033 ZNF792Q3KQV3 632 aa13.08□□□□□ -0.32
ITGB1-202ENST00000396033 BEND6Q5SZJ8 279 aaPredicted RBP13.08□□□□□ -0.32
ITGB1-202ENST00000396033 PEX26Q7Z412 305 aa13.08□□□□□ -0.32
ITGB1-202ENST00000396033 SLC47A2Q86VL8 602 aa13.08□□□□□ -0.32
ITGB1-202ENST00000396033 RNF149Q8NC42 400 aa13.08□□□□□ -0.32
ITGB1-202ENST00000396033 TRAPPC12Q8WVT3 735 aa13.08□□□□□ -0.32
ITGB1-202ENST00000396033 ARHGEF26Q96DR7 871 aa13.08□□□□□ -0.32
ITGB1-202ENST00000396033 NOCTQ9UK39 431 aaKnown RBP13.08□□□□□ -0.32
ITGB1-202ENST00000396033 DIS3Q9Y2L1 958 aaKnown RBP13.08□□□□□ -0.32
ITGB1-202ENST00000396033 PDE6CP51160 858 aa13.08□□□□□ -0.32
ITGB1-202ENST00000396033 C15orf39Q6ZRI6 1047 aa13.08□□□□□ -0.32
ITGB1-202ENST00000396033 DHX38Q92620 1227 aaKnown RBP13.08□□□□□ -0.32
ITGB1-202ENST00000396033 JPH2Q9BR39 696 aaPredicted RBP13.08□□□□□ -0.32
ITGB1-202ENST00000396033 MRPL4Q9BYD3 311 aaKnown RBP13.08□□□□□ -0.32
ITGB1-202ENST00000396033 ACP6Q9NPH0 428 aa13.08□□□□□ -0.32
ITGB1-202ENST00000396033 ZC3H11AO75152 810 aaKnown RBP eCLIP13.07□□□□□ -0.32
ITGB1-202ENST00000396033 CLDN10P78369 228 aa13.07□□□□□ -0.32
ITGB1-202ENST00000396033 TDRD10Q5VZ19 366 aaKnown RBP13.07□□□□□ -0.32
ITGB1-202ENST00000396033 CDCA2Q69YH5 1023 aaPredicted RBP13.07□□□□□ -0.32
ITGB1-202ENST00000396033 ZPBP2Q6X784 338 aa13.07□□□□□ -0.32
ITGB1-202ENST00000396033 ANKRD23Q86SG2 305 aa13.07□□□□□ -0.32
ITGB1-202ENST00000396033 RHPN2Q8IUC4 686 aa13.07□□□□□ -0.32
ITGB1-202ENST00000396033 SUCLA2Q9P2R7 463 aaPredicted RBP13.07□□□□□ -0.32
ITGB1-202ENST00000396033 PTPRJQ12913 1337 aa13.07□□□□□ -0.32
ITGB1-202ENST00000396033 CLDN3O15551 220 aa13.07□□□□□ -0.32
ITGB1-202ENST00000396033 PRKCBP05771 671 aa13.07□□□□□ -0.32
ITGB1-202ENST00000396033 KRT5P13647 590 aa13.07□□□□□ -0.32
ITGB1-202ENST00000396033 GCLCP48506 637 aaPredicted RBP13.07□□□□□ -0.32
ITGB1-202ENST00000396033 ZACNQ401N2 412 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms