RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 BTNL10A8MVZ5 291 aa19.27■□□□□ 0.67
SREBF1-204ENST00000395756 NOP56O00567 594 aaKnown RBP19.27■□□□□ 0.67
SREBF1-204ENST00000395756 TRIM66O15016 1216 aa19.27■□□□□ 0.67
SREBF1-204ENST00000395756 CHRNB2P17787 502 aa19.27■□□□□ 0.67
SREBF1-204ENST00000395756 GJC2Q5T442 439 aaPredicted RBP19.27■□□□□ 0.67
SREBF1-204ENST00000395756 SLC17A8Q8NDX2 589 aa19.27■□□□□ 0.67
SREBF1-204ENST00000395756 HELQQ8TDG4 1101 aa19.27■□□□□ 0.67
SREBF1-204ENST00000395756 UPF1Q92900 1129 aaKnown RBP eCLIP19.27■□□□□ 0.671e-9■■■■□ 19.9
SREBF1-204ENST00000395756 OPTNQ96CV9 577 aa19.27■□□□□ 0.67
SREBF1-204ENST00000395756 CELF4Q9BZC1 486 aaKnown RBP19.27■□□□□ 0.67
SREBF1-204ENST00000395756 RASSF4Q9H2L5 321 aa19.27■□□□□ 0.67
SREBF1-204ENST00000395756 BRCA1P38398 1863 aaKnown RBP19.26■□□□□ 0.67
SREBF1-204ENST00000395756 OSTNP61366 133 aa19.26■□□□□ 0.67
SREBF1-204ENST00000395756 ZNF572Q7Z3I7 529 aaPredicted RBP19.26■□□□□ 0.67
SREBF1-204ENST00000395756 SYCE1Q8N0S2 351 aa19.26■□□□□ 0.67
SREBF1-204ENST00000395756 TSEN2Q8NCE0 465 aaKnown RBP19.26■□□□□ 0.67
SREBF1-204ENST00000395756 DOCK1Q14185 1865 aa19.26■□□□□ 0.67
SREBF1-204ENST00000395756 PHIPQ8WWQ0 1821 aa19.26■□□□□ 0.67
SREBF1-204ENST00000395756 STAM2O75886 525 aa19.26■□□□□ 0.67
SREBF1-204ENST00000395756 CYP11B1P15538 503 aa19.26■□□□□ 0.67
SREBF1-204ENST00000395756 MKRN4PQ13434 485 aaPredicted RBP19.26■□□□□ 0.67
SREBF1-204ENST00000395756 LLGL2Q6P1M3 1020 aa19.26■□□□□ 0.67
SREBF1-204ENST00000395756 AENQ8WTP8 325 aaKnown RBP19.26■□□□□ 0.67
SREBF1-204ENST00000395756 PRPF31Q8WWY3 499 aaKnown RBP19.26■□□□□ 0.67
SREBF1-204ENST00000395756 MSTO1Q9BUK6 570 aa19.26■□□□□ 0.67
SREBF1-204ENST00000395756 AZI2Q9H6S1 392 aa19.26■□□□□ 0.67
SREBF1-204ENST00000395756 C17orf75Q9HAS0 396 aa19.26■□□□□ 0.67
SREBF1-204ENST00000395756 RNF14Q9UBS8 474 aa19.26■□□□□ 0.67
SREBF1-204ENST00000395756 ALG6Q9Y672 507 aa19.26■□□□□ 0.67
SREBF1-204ENST00000395756 PGRMC1O00264 195 aaKnown RBP19.25■□□□□ 0.67
SREBF1-204ENST00000395756 P4HA2O15460 535 aa19.25■□□□□ 0.67
SREBF1-204ENST00000395756 SART1O43290 800 aaKnown RBP19.25■□□□□ 0.67
SREBF1-204ENST00000395756 CSDE1O75534 798 aaKnown RBP19.25■□□□□ 0.67
SREBF1-204ENST00000395756 MARCKSL1P49006 195 aa19.25■□□□□ 0.67
SREBF1-204ENST00000395756 IGBP1P78318 339 aa19.25■□□□□ 0.67
SREBF1-204ENST00000395756 IFT20Q8IY31 132 aa19.25■□□□□ 0.67
SREBF1-204ENST00000395756 FAM71AQ8IYT1 594 aa19.25■□□□□ 0.67
SREBF1-204ENST00000395756 CASKIN2Q8WXE0 1202 aa19.25■□□□□ 0.67
SREBF1-204ENST00000395756 MFSD14AQ96MC6 490 aa19.25■□□□□ 0.67
SREBF1-204ENST00000395756 PORCNQ9H237 461 aa19.25■□□□□ 0.67
SREBF1-204ENST00000395756 ACBD3Q9H3P7 528 aa19.25■□□□□ 0.67
SREBF1-204ENST00000395756 PDGFCQ9NRA1 345 aa19.25■□□□□ 0.67
SREBF1-204ENST00000395756 RBPJLQ9UBG7 517 aa19.25■□□□□ 0.67
SREBF1-204ENST00000395756 PTPRJQ12913 1337 aa19.25■□□□□ 0.67
SREBF1-204ENST00000395756 GOLGA6BA6NDN3 693 aa19.25■□□□□ 0.67
SREBF1-204ENST00000395756 RNF40O75150 1001 aa19.25■□□□□ 0.67
SREBF1-204ENST00000395756 SYF2O95926 243 aaKnown RBP19.25■□□□□ 0.67
SREBF1-204ENST00000395756 NF2P35240 595 aa19.25■□□□□ 0.67
SREBF1-204ENST00000395756 TNNC1P63316 161 aa19.25■□□□□ 0.67
SREBF1-204ENST00000395756 ITIH3Q06033 890 aa19.25■□□□□ 0.67
SREBF1-204ENST00000395756 DNAJC21Q5F1R6 531 aaKnown RBP19.25■□□□□ 0.67
SREBF1-204ENST00000395756 ERO1BQ86YB8 467 aa19.25■□□□□ 0.67
SREBF1-204ENST00000395756 ANKRD13AQ8IZ07 590 aa19.25■□□□□ 0.67
SREBF1-204ENST00000395756 KRT35Q92764 455 aa19.25■□□□□ 0.67
SREBF1-204ENST00000395756 PASD1Q8IV76 773 aa19.25■□□□□ 0.67
SREBF1-204ENST00000395756 PBKQ96KB5 322 aa19.25■□□□□ 0.67
SREBF1-204ENST00000395756 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.25■□□□□ 0.672e-8■■■□□ 15.3
SREBF1-204ENST00000395756 SYT17Q9BSW7 474 aa19.25■□□□□ 0.67
SREBF1-204ENST00000395756 NRBP2Q9NSY0 501 aa19.25■□□□□ 0.67
SREBF1-204ENST00000395756 RBAKQ9NYW8 714 aaPredicted RBP19.25■□□□□ 0.67
SREBF1-204ENST00000395756 ANXA13P27216 316 aa19.24■□□□□ 0.67
SREBF1-204ENST00000395756 PDE6CP51160 858 aa19.24■□□□□ 0.67
SREBF1-204ENST00000395756 GPC5P78333 572 aa19.24■□□□□ 0.67
SREBF1-204ENST00000395756 FMO1Q01740 532 aa19.24■□□□□ 0.67
SREBF1-204ENST00000395756 KCTD2Q14681 263 aa19.24■□□□□ 0.67
SREBF1-204ENST00000395756 CPA5Q8WXQ8 436 aa19.24■□□□□ 0.67
SREBF1-204ENST00000395756 ALG3Q92685 438 aa19.24■□□□□ 0.67
SREBF1-204ENST00000395756 MYCBPQ99417 103 aaPredicted RBP19.24■□□□□ 0.67
SREBF1-204ENST00000395756 DHX33Q9H6R0 707 aaKnown RBP19.24■□□□□ 0.67
SREBF1-204ENST00000395756 FAM204AQ9H8W3 233 aa19.24■□□□□ 0.67
SREBF1-204ENST00000395756 SUCLA2Q9P2R7 463 aaPredicted RBP19.24■□□□□ 0.67
SREBF1-204ENST00000395756 NOCTQ9UK39 431 aaKnown RBP19.24■□□□□ 0.67
SREBF1-204ENST00000395756 INTUQ9ULD6 942 aa19.24■□□□□ 0.67
SREBF1-204ENST00000395756 PIK3CAP42336 1068 aa19.24■□□□□ 0.67
SREBF1-204ENST00000395756 TMEM132AQ24JP5 1023 aa19.24■□□□□ 0.67
SREBF1-204ENST00000395756 DCAF12L1Q5VU92 463 aa19.24■□□□□ 0.67
SREBF1-204ENST00000395756 SLFN11Q7Z7L1 901 aa19.24■□□□□ 0.67
SREBF1-204ENST00000395756 SEPT1Q8WYJ6 367 aa19.24■□□□□ 0.67
SREBF1-204ENST00000395756 ZNF653Q96CK0 615 aa19.24■□□□□ 0.67
SREBF1-204ENST00000395756 CLEC11AQ9Y240 323 aa19.24■□□□□ 0.67
SREBF1-204ENST00000395756 STXBP5LQ9Y2K9 1186 aa19.24■□□□□ 0.67
SREBF1-204ENST00000395756 KIAA1217Q5T5P2 1943 aa19.23■□□□□ 0.67
SREBF1-204ENST00000395756 MYPNQ86TC9 1320 aa19.23■□□□□ 0.67
SREBF1-204ENST00000395756 A0A0A6YYK5 440 aaPredicted RBP19.23■□□□□ 0.67
SREBF1-204ENST00000395756 A0A0G2JLL6 359 aaPredicted RBP19.23■□□□□ 0.67
SREBF1-204ENST00000395756 SNRPFP62306 86 aaKnown RBP19.23■□□□□ 0.67
SREBF1-204ENST00000395756 PPATQ06203 517 aa19.23■□□□□ 0.67
SREBF1-204ENST00000395756 CAPSQ13938 189 aa19.23■□□□□ 0.67
SREBF1-204ENST00000395756 PRRT2Q7Z6L0 340 aaPredicted RBP19.23■□□□□ 0.67
SREBF1-204ENST00000395756 USP37Q86T82 979 aa19.23■□□□□ 0.67
SREBF1-204ENST00000395756 SHC3Q92529 594 aa19.23■□□□□ 0.67
SREBF1-204ENST00000395756 HES6Q96HZ4 224 aa19.23■□□□□ 0.67
SREBF1-204ENST00000395756 FBXL18Q96ME1 805 aa19.23■□□□□ 0.67
SREBF1-204ENST00000395756 DPH5Q9H2P9 285 aa19.23■□□□□ 0.67
SREBF1-204ENST00000395756 C1orf112Q9NSG2 853 aa19.23■□□□□ 0.67
SREBF1-204ENST00000395756 RLFQ13129 1914 aa19.23■□□□□ 0.67
SREBF1-204ENST00000395756 EXTL3O43909 919 aa19.23■□□□□ 0.67
SREBF1-204ENST00000395756 CNMDO75829 334 aa19.23■□□□□ 0.67
SREBF1-204ENST00000395756 RFX1P22670 979 aa19.23■□□□□ 0.67
SREBF1-204ENST00000395756 TNFSF9P41273 254 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms