RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 ZC3H11AO75152 810 aaKnown RBP eCLIP4.58□□□□□ -1.68
HERC4-204ENST00000395198 GLAP06280 429 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 CKBP12277 381 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 SELLP14151 372 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 MAPK3P27361 379 aaPredicted RBP4.58□□□□□ -1.68
HERC4-204ENST00000395198 POU3F4P49335 361 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 CCR3P51677 355 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 RNASELQ05823 741 aaKnown RBP4.58□□□□□ -1.68
HERC4-204ENST00000395198 TRIM71Q2Q1W2 868 aaKnown RBP4.58□□□□□ -1.68
HERC4-204ENST00000395198 YOD1Q5VVQ6 348 aaPredicted RBP4.58□□□□□ -1.68
HERC4-204ENST00000395198 PRPF40BQ6NWY9 871 aaKnown RBP4.58□□□□□ -1.68
HERC4-204ENST00000395198 PADI6Q6TGC4 694 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 DPP9Q86TI2 863 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 FCHSD1Q86WN1 690 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 CMTR2Q8IYT2 770 aaKnown RBP4.58□□□□□ -1.68
HERC4-204ENST00000395198 CAMKK1Q8N5S9 505 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 ZBTB34Q8NCN2 500 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 CPLX3Q8WVH0 158 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 TMEM40Q8WWA1 233 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 SGK3Q96BR1 496 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 TUBGCP3Q96CW5 907 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 OXCT2Q9BYC2 517 aaPredicted RBP4.58□□□□□ -1.68
HERC4-204ENST00000395198 STK33Q9BYT3 514 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 ANKRD2Q9GZV1 360 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 NT5C3AQ9H0P0 336 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 OR10A4Q9H209 315 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 NRDE2Q9H7Z3 1164 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 WASH6PQ9NQA3 447 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 NRBP2Q9NSY0 501 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 ACTR10Q9NZ32 417 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 HESX1Q9UBX0 185 aa4.58□□□□□ -1.68
HERC4-204ENST00000395198 PHLPP2Q6ZVD8 1323 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 SYNJ2O15056 1496 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 CYP3A7-CYP3A51PA0A087WV96 503 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 SENP3-EIF4A1A0A087X0R7 540 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 ST8SIA5O15466 376 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 RRP8O43159 456 aaKnown RBP4.57□□□□□ -1.68
HERC4-204ENST00000395198 SEC24DO94855 1032 aaPredicted RBP4.57□□□□□ -1.68
HERC4-204ENST00000395198 STARD3NLO95772 234 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 MYL4P12829 197 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 ALADP13716 330 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 POU2F1P14859 743 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 CYP3A7P24462 503 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 CTSSP25774 331 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 TNFRSF8P28908 595 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 CYP2C19P33261 490 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 PIK3CBP42338 1070 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 GRB10Q13322 594 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 ERV3-1Q14264 604 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 ZNF460Q14592 562 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 RAB3GAP1Q15042 981 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 NFKBIBQ15653 356 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 ZNF124Q15973 351 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 BEND6Q5SZJ8 279 aaPredicted RBP4.57□□□□□ -1.68
HERC4-204ENST00000395198 KLHDC7AQ5VTJ3 777 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 KLHDC10Q6PID8 442 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 SGMS1Q86VZ5 419 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 NIPA2Q8N8Q9 360 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 CTCFLQ8NI51 663 aaPredicted RBP4.57□□□□□ -1.68
HERC4-204ENST00000395198 IFI44Q8TCB0 444 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 TCP11Q8WWU5 503 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 ARHGAP45Q92619 1136 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 ATP6V1G3Q96LB4 118 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 EDEM2Q9BV94 578 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 CLK4Q9HAZ1 481 aaKnown RBP4.57□□□□□ -1.68
HERC4-204ENST00000395198 RPRD1BQ9NQG5 326 aaKnown RBP4.57□□□□□ -1.68
HERC4-204ENST00000395198 IARS2Q9NSE4 1012 aaKnown RBP4.57□□□□□ -1.68
HERC4-204ENST00000395198 DNAJB9Q9UBS3 223 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 NCOA3Q9Y6Q9 1424 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 MAGI1Q96QZ7 1491 aaPredicted RBP4.57□□□□□ -1.68
HERC4-204ENST00000395198 A0A1W2PPL8 197 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 OR6C65A6NJZ3 312 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 CA12O43570 354 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 DNAJC8O75937 253 aaPredicted RBP4.57□□□□□ -1.68
HERC4-204ENST00000395198 SEC31AO94979 1220 aaKnown RBP4.57□□□□□ -1.68
HERC4-204ENST00000395198 PLGP00747 810 aaPredicted RBP4.57□□□□□ -1.68
HERC4-204ENST00000395198 ITGB1P05556 798 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 CSF2RAP15509 400 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 CIITAP33076 1130 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 EIF4A3P38919 411 aaKnown RBP4.57□□□□□ -1.68
HERC4-204ENST00000395198 DPP6P42658 865 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 ARCN1P48444 511 aaKnown RBP4.57□□□□□ -1.68
HERC4-204ENST00000395198 COASYQ13057 564 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 GPS2Q13227 327 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 DOC2AQ14183 400 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 CWF19L2Q2TBE0 894 aaKnown RBP4.57□□□□□ -1.68
HERC4-204ENST00000395198 CCDC14Q49A88 953 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 USP39Q53GS9 565 aaKnown RBP4.57□□□□□ -1.68
HERC4-204ENST00000395198 MDH1BQ5I0G3 518 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 C6orf89Q6UWU4 347 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 OVCH2Q7RTZ1 564 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 MTDHQ86UE4 582 aaKnown RBP4.57□□□□□ -1.68
HERC4-204ENST00000395198 FAM83AQ86UY5 434 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 SCYL3Q8IZE3 742 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 TTC5Q8N0Z6 440 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 CARFQ8N187 725 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 ADAM32Q8TC27 787 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 DDX1Q92499 740 aaKnown RBP4.57□□□□□ -1.68
HERC4-204ENST00000395198 HDAC11Q96DB2 347 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 CDK5RAP1Q96SZ6 601 aaKnown RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms