RNA–Protein interactions for RNA: ENST00000395185.7

HERC4-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-203ENST00000395185 ERVK-21P61565 698 aa9.27□□□□□ -0.93
HERC4-203ENST00000395185 FKBP3Q00688 224 aaKnown RBP9.27□□□□□ -0.93
HERC4-203ENST00000395185 DMP1Q13316 513 aaPredicted RBP9.27□□□□□ -0.93
HERC4-203ENST00000395185 CAPSQ13938 189 aa9.27□□□□□ -0.93
HERC4-203ENST00000395185 BTG3Q14201 252 aaPredicted RBP9.27□□□□□ -0.93
HERC4-203ENST00000395185 PCBP1Q15365 356 aaKnown RBP eCLIP9.27□□□□□ -0.93
HERC4-203ENST00000395185 PTPROQ16827 1216 aa9.27□□□□□ -0.93
HERC4-203ENST00000395185 FAM187BQ17R55 369 aa9.27□□□□□ -0.93
HERC4-203ENST00000395185 TCTN1Q2MV58 587 aa9.27□□□□□ -0.93
HERC4-203ENST00000395185 KLHL10Q6JEL2 608 aa9.27□□□□□ -0.93
HERC4-203ENST00000395185 STXBP4Q6ZWJ1 553 aa9.27□□□□□ -0.93
HERC4-203ENST00000395185 CATSPER4Q7RTX7 472 aa9.27□□□□□ -0.93
HERC4-203ENST00000395185 SRGAP1Q7Z6B7 1085 aa9.27□□□□□ -0.93
HERC4-203ENST00000395185 TMCO2Q7Z6W1 182 aaPredicted RBP9.27□□□□□ -0.93
HERC4-203ENST00000395185 FILIP1Q7Z7B0 1213 aa9.27□□□□□ -0.93
HERC4-203ENST00000395185 RTN4RL1Q86UN2 441 aaPredicted RBP9.27□□□□□ -0.93
HERC4-203ENST00000395185 MAP4K3Q8IVH8 894 aa9.27□□□□□ -0.93
HERC4-203ENST00000395185 ABI1Q8IZP0 508 aa9.27□□□□□ -0.93
HERC4-203ENST00000395185 NOC3LQ8WTT2 800 aaKnown RBP9.27□□□□□ -0.93
HERC4-203ENST00000395185 BORCS6Q96GS4 357 aa9.27□□□□□ -0.93
HERC4-203ENST00000395185 IFT74Q96LB3 600 aa9.27□□□□□ -0.93
HERC4-203ENST00000395185 NLRP4Q96MN2 994 aa9.27□□□□□ -0.93
HERC4-203ENST00000395185 CEP63Q96MT8 703 aa9.27□□□□□ -0.93
HERC4-203ENST00000395185 FDXACB1Q9BRP7 624 aaPredicted RBP9.27□□□□□ -0.93
HERC4-203ENST00000395185 OSBPL7Q9BZF2 842 aa9.27□□□□□ -0.93
HERC4-203ENST00000395185 ZHX3Q9H4I2 956 aa9.27□□□□□ -0.93
HERC4-203ENST00000395185 THAP9Q9H5L6 903 aa9.27□□□□□ -0.93
HERC4-203ENST00000395185 ELAC1Q9H777 363 aaKnown RBP9.27□□□□□ -0.93
HERC4-203ENST00000395185 TMEM206Q9H813 350 aa9.27□□□□□ -0.93
HERC4-203ENST00000395185 CERS4Q9HA82 394 aa9.27□□□□□ -0.93
HERC4-203ENST00000395185 IFT122Q9HBG6 1241 aa9.27□□□□□ -0.93
HERC4-203ENST00000395185 KMT5AQ9NQR1 393 aa9.27□□□□□ -0.93
HERC4-203ENST00000395185 AAASQ9NRG9 546 aa9.27□□□□□ -0.93
HERC4-203ENST00000395185 SAMSN1Q9NSI8 373 aaKnown RBP9.27□□□□□ -0.93
HERC4-203ENST00000395185 TYW1Q9NV66 732 aaKnown RBP9.27□□□□□ -0.93
HERC4-203ENST00000395185 CTNND2Q9UQB3 1225 aa9.27□□□□□ -0.93
HERC4-203ENST00000395185 CEP290O15078 2479 aa9.26□□□□□ -0.93
HERC4-203ENST00000395185 TRIM49BA6NDI0 452 aa9.26□□□□□ -0.93
HERC4-203ENST00000395185 GCNT3O95395 438 aa9.26□□□□□ -0.93
HERC4-203ENST00000395185 EOMESO95936 686 aa9.26□□□□□ -0.93
HERC4-203ENST00000395185 ADSSP30520 456 aa9.26□□□□□ -0.93
HERC4-203ENST00000395185 PHKA2P46019 1235 aa9.26□□□□□ -0.93
HERC4-203ENST00000395185 FAM189BP81408 668 aa9.26□□□□□ -0.93
HERC4-203ENST00000395185 SPOUT1Q5T280 376 aaKnown RBP9.26□□□□□ -0.93
HERC4-203ENST00000395185 SLC39A4Q6P5W5 647 aa9.26□□□□□ -0.93
HERC4-203ENST00000395185 FAM228AQ86W67 206 aa9.26□□□□□ -0.93
HERC4-203ENST00000395185 KSR1Q8IVT5 923 aa9.26□□□□□ -0.93
HERC4-203ENST00000395185 RNF149Q8NC42 400 aa9.26□□□□□ -0.93
HERC4-203ENST00000395185 MAFAQ8NHW3 353 aaPredicted RBP9.26□□□□□ -0.93
HERC4-203ENST00000395185 GOLGA5Q8TBA6 731 aa9.26□□□□□ -0.93
HERC4-203ENST00000395185 KHSRPQ92945 711 aaKnown RBP eCLIP9.26□□□□□ -0.932e-10■■■■□ 20.3
HERC4-203ENST00000395185 ZNF668Q96K58 619 aaPredicted RBP9.26□□□□□ -0.93
HERC4-203ENST00000395185 FBXL18Q96ME1 805 aa9.26□□□□□ -0.93
HERC4-203ENST00000395185 ACCSQ96QU6 501 aa9.26□□□□□ -0.93
HERC4-203ENST00000395185 SRRTQ9BXP5 876 aaKnown RBP9.26□□□□□ -0.93
HERC4-203ENST00000395185 GBP3Q9H0R5 595 aa9.26□□□□□ -0.93
HERC4-203ENST00000395185 IKZF4Q9H2S9 585 aa9.26□□□□□ -0.93
HERC4-203ENST00000395185 TMX1Q9H3N1 280 aa9.26□□□□□ -0.93
HERC4-203ENST00000395185 AGPAT3Q9NRZ7 376 aa9.26□□□□□ -0.93
HERC4-203ENST00000395185 TMEM161AQ9NX61 479 aa9.26□□□□□ -0.93
HERC4-203ENST00000395185 LMCD1Q9NZU5 365 aa9.26□□□□□ -0.93
HERC4-203ENST00000395185 LIMA1Q9UHB6 759 aaKnown RBP9.26□□□□□ -0.93
HERC4-203ENST00000395185 ALPK3Q96L96 1907 aa9.26□□□□□ -0.93
HERC4-203ENST00000395185 PHLPP2Q6ZVD8 1323 aa9.26□□□□□ -0.93
HERC4-203ENST00000395185 LOXHD1Q8IVV2 1947 aa9.25□□□□□ -0.93
HERC4-203ENST00000395185 LCHNA4D1U4 455 aa9.25□□□□□ -0.93
HERC4-203ENST00000395185 LINC01553A4QN01 128 aa9.25□□□□□ -0.93
HERC4-203ENST00000395185 CCDC169A6NNP5 214 aa9.25□□□□□ -0.93
HERC4-203ENST00000395185 BECN2A8MW95 431 aa9.25□□□□□ -0.93
HERC4-203ENST00000395185 K7ENM7 598 aa9.25□□□□□ -0.93
HERC4-203ENST00000395185 ACKR2O00590 384 aa9.25□□□□□ -0.93
HERC4-203ENST00000395185 ABLIM1O14639 778 aa9.25□□□□□ -0.93
HERC4-203ENST00000395185 MAPK13O15264 365 aa9.25□□□□□ -0.93
HERC4-203ENST00000395185 DGKIO75912 1065 aa9.25□□□□□ -0.93
HERC4-203ENST00000395185 ERLIN2O94905 339 aa9.25□□□□□ -0.93
HERC4-203ENST00000395185 NUDT7P0C024 238 aa9.25□□□□□ -0.93
HERC4-203ENST00000395185 ATP1A3P13637 1013 aa9.25□□□□□ -0.93
HERC4-203ENST00000395185 EEF1GP26641 437 aaKnown RBP9.25□□□□□ -0.93
HERC4-203ENST00000395185 BMPR1AP36894 532 aa9.25□□□□□ -0.93
HERC4-203ENST00000395185 AMHR2Q16671 573 aa9.25□□□□□ -0.93
HERC4-203ENST00000395185 TWF2Q6IBS0 349 aaKnown RBP9.25□□□□□ -0.93
HERC4-203ENST00000395185 ZPBP2Q6X784 338 aa9.25□□□□□ -0.93
HERC4-203ENST00000395185 ZBTB8OSQ8IWT0 167 aa9.25□□□□□ -0.93
HERC4-203ENST00000395185 NELFCDQ8IXH7 590 aa9.25□□□□□ -0.93
HERC4-203ENST00000395185 TMEM192Q8IY95 271 aa9.25□□□□□ -0.93
HERC4-203ENST00000395185 CMTR2Q8IYT2 770 aaKnown RBP9.25□□□□□ -0.93
HERC4-203ENST00000395185 HACE1Q8IYU2 909 aa9.25□□□□□ -0.93
HERC4-203ENST00000395185 CSGALNACT2Q8N6G5 542 aa9.25□□□□□ -0.93
HERC4-203ENST00000395185 TMEM40Q8WWA1 233 aa9.25□□□□□ -0.93
HERC4-203ENST00000395185 RSPH1Q8WYR4 309 aa9.25□□□□□ -0.93
HERC4-203ENST00000395185 PGBD4Q96DM1 585 aa9.25□□□□□ -0.93
HERC4-203ENST00000395185 PDLIM2Q96JY6 352 aa9.25□□□□□ -0.93
HERC4-203ENST00000395185 KIFC3Q9BVG8 833 aa9.25□□□□□ -0.93
HERC4-203ENST00000395185 PLVAPQ9BX97 442 aa9.25□□□□□ -0.93
HERC4-203ENST00000395185 PTPRHQ9HD43 1115 aa9.25□□□□□ -0.93
HERC4-203ENST00000395185 MTUS1Q9ULD2 1270 aa9.25□□□□□ -0.93
HERC4-203ENST00000395185 PCDHB12Q9Y5F1 795 aa9.25□□□□□ -0.93
HERC4-203ENST00000395185 TRIOBPQ9H2D6 2365 aa9.25□□□□□ -0.93
HERC4-203ENST00000395185 RANBP2P49792 3224 aaKnown RBP9.24□□□□□ -0.93
HERC4-203ENST00000395185 A0A0B4J269 797 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms