RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 HELQQ8TDG4 1101 aa20.61■□□□□ 0.89
CLDND1-203ENST00000394181 SYT11Q9BT88 431 aa20.61■□□□□ 0.89
CLDND1-203ENST00000394181 ZFYVE28Q9HCC9 887 aa20.61■□□□□ 0.89
CLDND1-203ENST00000394181 NENFQ9UMX5 172 aa20.61■□□□□ 0.89
CLDND1-203ENST00000394181 EVPLQ92817 2033 aa20.61■□□□□ 0.89
CLDND1-203ENST00000394181 CNTNAP2Q9UHC6 1331 aa20.61■□□□□ 0.89
CLDND1-203ENST00000394181 TOM1L1O75674 476 aa20.61■□□□□ 0.89
CLDND1-203ENST00000394181 GTF2H1P32780 548 aa20.61■□□□□ 0.89
CLDND1-203ENST00000394181 INHBEP58166 350 aa20.61■□□□□ 0.89
CLDND1-203ENST00000394181 PTENP60484 403 aa20.61■□□□□ 0.89
CLDND1-203ENST00000394181 MBTD1Q05BQ5 628 aa20.61■□□□□ 0.89
CLDND1-203ENST00000394181 PRPF4BQ13523 1007 aaKnown RBP20.61■□□□□ 0.89
CLDND1-203ENST00000394181 DGKDQ16760 1214 aa20.61■□□□□ 0.89
CLDND1-203ENST00000394181 ERCC6LQ2NKX8 1250 aa20.61■□□□□ 0.89
CLDND1-203ENST00000394181 TDRD10Q5VZ19 366 aaKnown RBP20.61■□□□□ 0.89
CLDND1-203ENST00000394181 MTHFD1LQ6UB35 978 aa20.61■□□□□ 0.89
CLDND1-203ENST00000394181 GLYCTKQ8IVS8 523 aa20.61■□□□□ 0.89
CLDND1-203ENST00000394181 MSL3Q8N5Y2 521 aaKnown RBP20.61■□□□□ 0.89
CLDND1-203ENST00000394181 FNBP1Q96RU3 617 aa20.61■□□□□ 0.89
CLDND1-203ENST00000394181 FZD8Q9H461 694 aa20.61■□□□□ 0.89
CLDND1-203ENST00000394181 SRGAP2O75044 1071 aa20.6■□□□□ 0.89
CLDND1-203ENST00000394181 C4BPAP04003 597 aaKnown RBP20.6■□□□□ 0.89
CLDND1-203ENST00000394181 USP8P40818 1118 aa20.6■□□□□ 0.89
CLDND1-203ENST00000394181 EEF1DP3Q658K8 133 aa20.6■□□□□ 0.89
CLDND1-203ENST00000394181 ALKBH5Q6P6C2 394 aaKnown RBP20.6■□□□□ 0.89
CLDND1-203ENST00000394181 PALB2Q86YC2 1186 aa20.6■□□□□ 0.89
CLDND1-203ENST00000394181 SLC30A5Q8TAD4 765 aa20.6■□□□□ 0.89
CLDND1-203ENST00000394181 SLC20A1Q8WUM9 679 aa20.6■□□□□ 0.89
CLDND1-203ENST00000394181 ARHGAP39Q9C0H5 1083 aa20.6■□□□□ 0.89
CLDND1-203ENST00000394181 CDC23Q9UJX2 597 aa20.6■□□□□ 0.89
CLDND1-203ENST00000394181 A0A087WZ62 844 aa20.59■□□□□ 0.89
CLDND1-203ENST00000394181 PPFIA1Q13136 1202 aa20.59■□□□□ 0.89
CLDND1-203ENST00000394181 ELF2Q15723 593 aa20.59■□□□□ 0.89
CLDND1-203ENST00000394181 NAB2Q15742 525 aa20.59■□□□□ 0.89
CLDND1-203ENST00000394181 GRIK4Q16099 956 aa20.59■□□□□ 0.89
CLDND1-203ENST00000394181 OR5B17Q8NGF7 314 aa20.59■□□□□ 0.89
CLDND1-203ENST00000394181 U2AF1L4Q8WU68 220 aaKnown RBP20.59■□□□□ 0.89
CLDND1-203ENST00000394181 DHX38Q92620 1227 aaKnown RBP20.59■□□□□ 0.89
CLDND1-203ENST00000394181 FDXACB1Q9BRP7 624 aaPredicted RBP20.59■□□□□ 0.89
CLDND1-203ENST00000394181 C2orf40Q9H1Z8 148 aa20.59■□□□□ 0.89
CLDND1-203ENST00000394181 SETD4Q9NVD3 440 aa20.59■□□□□ 0.89
CLDND1-203ENST00000394181 AKT3Q9Y243 479 aa20.59■□□□□ 0.89
CLDND1-203ENST00000394181 ZNF236Q9UL36 1845 aa20.59■□□□□ 0.89
CLDND1-203ENST00000394181 TNPO2O14787 897 aaKnown RBP20.59■□□□□ 0.89
CLDND1-203ENST00000394181 VNN1O95497 513 aa20.59■□□□□ 0.89
CLDND1-203ENST00000394181 TFDP1Q14186 410 aa20.59■□□□□ 0.89
CLDND1-203ENST00000394181 KIF22Q14807 665 aa20.59■□□□□ 0.89
CLDND1-203ENST00000394181 USP37Q86T82 979 aa20.59■□□□□ 0.89
CLDND1-203ENST00000394181 CCDC102AQ96A19 550 aa20.59■□□□□ 0.89
CLDND1-203ENST00000394181 PTPRHQ9HD43 1115 aa20.59■□□□□ 0.89
CLDND1-203ENST00000394181 PUF60Q9UHX1 559 aaKnown RBP20.59■□□□□ 0.89
CLDND1-203ENST00000394181 TMCO5BA8MYB1 307 aa20.58■□□□□ 0.89
CLDND1-203ENST00000394181 ACKR2O00590 384 aa20.58■□□□□ 0.89
CLDND1-203ENST00000394181 KIF3CO14782 793 aa20.58■□□□□ 0.89
CLDND1-203ENST00000394181 KIAA0391O15091 583 aaKnown RBP20.58■□□□□ 0.89
CLDND1-203ENST00000394181 LDHAP00338 332 aaKnown RBP20.58■□□□□ 0.89
CLDND1-203ENST00000394181 RFX1P22670 979 aa20.58■□□□□ 0.89
CLDND1-203ENST00000394181 ZACNQ401N2 412 aa20.58■□□□□ 0.89
CLDND1-203ENST00000394181 CYP4F22Q6NT55 531 aa20.58■□□□□ 0.89
CLDND1-203ENST00000394181 PAXIP1Q6ZW49 1069 aaPredicted RBP20.58■□□□□ 0.89
CLDND1-203ENST00000394181 CEP120Q8N960 986 aa20.58■□□□□ 0.89
CLDND1-203ENST00000394181 MNS1Q8NEH6 495 aa20.58■□□□□ 0.89
CLDND1-203ENST00000394181 GPBP1L1Q9HC44 474 aaPredicted RBP20.58■□□□□ 0.89
CLDND1-203ENST00000394181 BRCA2P51587 3418 aa20.58■□□□□ 0.89
CLDND1-203ENST00000394181 A6NJR5 290 aa20.58■□□□□ 0.88
CLDND1-203ENST00000394181 TADA3O75528 432 aa20.58■□□□□ 0.88
CLDND1-203ENST00000394181 SGPL1O95470 568 aa20.58■□□□□ 0.88
CLDND1-203ENST00000394181 CALCAP01258 141 aa20.58■□□□□ 0.88
CLDND1-203ENST00000394181 OSTNP61366 133 aa20.58■□□□□ 0.88
CLDND1-203ENST00000394181 MCL1Q07820 350 aa20.58■□□□□ 0.88
CLDND1-203ENST00000394181 ATF7IP2Q5U623 682 aa20.58■□□□□ 0.88
CLDND1-203ENST00000394181 SPOPLQ6IQ16 392 aa20.58■□□□□ 0.88
CLDND1-203ENST00000394181 TSHZ1Q6ZSZ6 1077 aa20.58■□□□□ 0.88
CLDND1-203ENST00000394181 TRAPPC11Q7Z392 1133 aa20.58■□□□□ 0.88
CLDND1-203ENST00000394181 KAT2BQ92831 832 aa20.58■□□□□ 0.88
CLDND1-203ENST00000394181 ARID3AQ99856 593 aa20.58■□□□□ 0.88
CLDND1-203ENST00000394181 EPC1Q9H2F5 836 aa20.58■□□□□ 0.88
CLDND1-203ENST00000394181 TAS2R14Q9NYV8 317 aa20.58■□□□□ 0.88
CLDND1-203ENST00000394181 HTTP42858 3142 aa20.57■□□□□ 0.88
CLDND1-203ENST00000394181 MAGEB2O15479 319 aa20.57■□□□□ 0.88
CLDND1-203ENST00000394181 ASAP2O43150 1006 aa20.57■□□□□ 0.88
CLDND1-203ENST00000394181 CYP26A1O43174 497 aa20.57■□□□□ 0.88
CLDND1-203ENST00000394181 HLA-DRAP01903 254 aa20.57■□□□□ 0.88
CLDND1-203ENST00000394181 PROZP22891 400 aa20.57■□□□□ 0.88
CLDND1-203ENST00000394181 RGS2P41220 211 aa20.57■□□□□ 0.88
CLDND1-203ENST00000394181 TM4SF4P48230 202 aa20.57■□□□□ 0.88
CLDND1-203ENST00000394181 NAP1L1P55209 391 aaKnown RBP20.57■□□□□ 0.88
CLDND1-203ENST00000394181 ENPEPQ07075 957 aa20.57■□□□□ 0.88
CLDND1-203ENST00000394181 BMS1Q14692 1282 aaKnown RBP20.57■□□□□ 0.88
CLDND1-203ENST00000394181 TLK2Q86UE8 772 aa20.57■□□□□ 0.88
CLDND1-203ENST00000394181 FAM71AQ8IYT1 594 aa20.57■□□□□ 0.88
CLDND1-203ENST00000394181 FAM212AQ96EL1 285 aa20.57■□□□□ 0.88
CLDND1-203ENST00000394181 NT5C1BQ96P26 610 aa20.57■□□□□ 0.88
CLDND1-203ENST00000394181 TACC1O75410 805 aa20.56■□□□□ 0.88
CLDND1-203ENST00000394181 IGHA2P01877 340 aa20.56■□□□□ 0.88
CLDND1-203ENST00000394181 BEX3Q00994 111 aa20.56■□□□□ 0.88
CLDND1-203ENST00000394181 SREBF2Q12772 1141 aa20.56■□□□□ 0.88
CLDND1-203ENST00000394181 BIRC3Q13489 604 aa20.56■□□□□ 0.88
CLDND1-203ENST00000394181 HIC1Q14526 733 aa20.56■□□□□ 0.88
CLDND1-203ENST00000394181 PAPD7Q5XG87 772 aaKnown RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms