RNA–Protein interactions for RNA: ENST00000393758.6

PDZD4-202, Transcript of PDZ domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDZD4, Length 3,763 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-202ENST00000393758 TM4SF1P30408 202 aa17.16■□□□□ 0.34
PDZD4-202ENST00000393758 CHKAP35790 457 aa17.16■□□□□ 0.34
PDZD4-202ENST00000393758 ZRSR2Q15696 482 aaKnown RBP17.16■□□□□ 0.34
PDZD4-202ENST00000393758 TSNAXIP1Q2TAA8 658 aa17.16■□□□□ 0.34
PDZD4-202ENST00000393758 PPP1R21Q6ZMI0 780 aa17.16■□□□□ 0.34
PDZD4-202ENST00000393758 MIGA2Q7L4E1 593 aa17.16■□□□□ 0.34
PDZD4-202ENST00000393758 SLC5A5Q92911 643 aa17.16■□□□□ 0.34
PDZD4-202ENST00000393758 NUDCD1Q96RS6 583 aa17.16■□□□□ 0.34
PDZD4-202ENST00000393758 HSPBP1Q9NZL4 362 aa17.16■□□□□ 0.34
PDZD4-202ENST00000393758 SYCP2LQ5T4T6 812 aa17.16■□□□□ 0.34
PDZD4-202ENST00000393758 DNAJC18Q9H819 358 aa17.16■□□□□ 0.34
PDZD4-202ENST00000393758 TXLNGQ9NUQ3 528 aa17.16■□□□□ 0.34
PDZD4-202ENST00000393758 PFASO15067 1338 aa17.16■□□□□ 0.34
PDZD4-202ENST00000393758 NUP98P52948 1817 aa17.16■□□□□ 0.34
PDZD4-202ENST00000393758 PARP4Q9UKK3 1724 aaKnown RBP17.16■□□□□ 0.34
PDZD4-202ENST00000393758 DDTLA6NHG4 134 aaPredicted RBP17.16■□□□□ 0.34
PDZD4-202ENST00000393758 SGK1O00141 431 aa17.16■□□□□ 0.34
PDZD4-202ENST00000393758 SMIM24O75264 130 aa17.16■□□□□ 0.34
PDZD4-202ENST00000393758 SLITRK3O94933 977 aa17.16■□□□□ 0.34
PDZD4-202ENST00000393758 HAUS6Q7Z4H7 955 aa17.16■□□□□ 0.34
PDZD4-202ENST00000393758 C1orf131Q8NDD1 294 aaKnown RBP17.16■□□□□ 0.34
PDZD4-202ENST00000393758 TLCD1Q96CP7 247 aa17.16■□□□□ 0.34
PDZD4-202ENST00000393758 TOPORSQ9NS56 1045 aaPredicted RBP17.16■□□□□ 0.34
PDZD4-202ENST00000393758 C15orf41Q9Y2V0 281 aa17.16■□□□□ 0.34
PDZD4-202ENST00000393758 EDIL3O43854 480 aa17.15■□□□□ 0.34
PDZD4-202ENST00000393758 ARP10275 920 aa17.15■□□□□ 0.34
PDZD4-202ENST00000393758 PPP3CAQ08209 521 aa17.15■□□□□ 0.34
PDZD4-202ENST00000393758 TRMT10CQ7L0Y3 403 aaKnown RBP17.15■□□□□ 0.34
PDZD4-202ENST00000393758 ANKMY2Q8IV38 441 aa17.15■□□□□ 0.34
PDZD4-202ENST00000393758 RBM15Q96T37 977 aaKnown RBP eCLIP17.15■□□□□ 0.34
PDZD4-202ENST00000393758 WDR11Q9BZH6 1224 aa17.15■□□□□ 0.34
PDZD4-202ENST00000393758 ZNF142P52746 1687 aaPredicted RBP17.15■□□□□ 0.34
PDZD4-202ENST00000393758 TIAM2Q8IVF5 1701 aa17.15■□□□□ 0.34
PDZD4-202ENST00000393758 RNASELQ05823 741 aaKnown RBP17.15■□□□□ 0.34
PDZD4-202ENST00000393758 CRYMQ14894 314 aa17.15■□□□□ 0.34
PDZD4-202ENST00000393758 ZNF394Q53GI3 561 aa17.15■□□□□ 0.34
PDZD4-202ENST00000393758 ANKRD20A3Q5VUR7 823 aa17.15■□□□□ 0.34
PDZD4-202ENST00000393758 LLGL2Q6P1M3 1020 aa17.15■□□□□ 0.34
PDZD4-202ENST00000393758 CBWD2Q8IUF1 395 aa17.15■□□□□ 0.34
PDZD4-202ENST00000393758 ACSF2Q96CM8 615 aaPredicted RBP17.15■□□□□ 0.34
PDZD4-202ENST00000393758 TMEM206Q9H813 350 aa17.15■□□□□ 0.34
PDZD4-202ENST00000393758 PRR12Q9ULL5 1215 aa17.15■□□□□ 0.34
PDZD4-202ENST00000393758 PPIP5K2O43314 1243 aa17.15■□□□□ 0.34
PDZD4-202ENST00000393758 RALAP11233 206 aa17.15■□□□□ 0.34
PDZD4-202ENST00000393758 VCAM1P19320 739 aa17.15■□□□□ 0.34
PDZD4-202ENST00000393758 EIF2AK2P19525 551 aaKnown RBP17.15■□□□□ 0.34
PDZD4-202ENST00000393758 CEP55Q53EZ4 464 aa17.15■□□□□ 0.34
PDZD4-202ENST00000393758 NOP9Q86U38 636 aaKnown RBP17.15■□□□□ 0.34
PDZD4-202ENST00000393758 SYNCQ9H7C4 482 aa17.15■□□□□ 0.34
PDZD4-202ENST00000393758 STXBP5LQ9Y2K9 1186 aa17.15■□□□□ 0.34
PDZD4-202ENST00000393758 RPTORQ8N122 1335 aa17.15■□□□□ 0.34
PDZD4-202ENST00000393758 MYH3P11055 1940 aa17.15■□□□□ 0.34
PDZD4-202ENST00000393758 CLGNO14967 610 aa17.14■□□□□ 0.34
PDZD4-202ENST00000393758 MAPK13O15264 365 aa17.14■□□□□ 0.34
PDZD4-202ENST00000393758 NUDT17P0C025 328 aa17.14■□□□□ 0.34
PDZD4-202ENST00000393758 ZDHHC24Q6UX98 284 aa17.14■□□□□ 0.34
PDZD4-202ENST00000393758 TMEM179Q6ZVK1 233 aa17.14■□□□□ 0.34
PDZD4-202ENST00000393758 SLFN11Q7Z7L1 901 aa17.14■□□□□ 0.34
PDZD4-202ENST00000393758 ETNPPLQ8TBG4 499 aa17.14■□□□□ 0.34
PDZD4-202ENST00000393758 MAIP1Q8WWC4 291 aa17.14■□□□□ 0.34
PDZD4-202ENST00000393758 OSBPL1AQ9BXW6 950 aa17.14■□□□□ 0.34
PDZD4-202ENST00000393758 COA1Q9GZY4 146 aa17.14■□□□□ 0.34
PDZD4-202ENST00000393758 KIF9Q9HAQ2 790 aa17.14■□□□□ 0.34
PDZD4-202ENST00000393758 SRRM3A6NNA2 597 aaPredicted RBP17.14■□□□□ 0.33
PDZD4-202ENST00000393758 POLD1P28340 1107 aa17.14■□□□□ 0.33
PDZD4-202ENST00000393758 P3H1Q32P28 736 aa17.14■□□□□ 0.33
PDZD4-202ENST00000393758 FAM228AQ86W67 206 aa17.14■□□□□ 0.33
PDZD4-202ENST00000393758 SPATS2LQ9NUQ6 558 aaKnown RBP17.14■□□□□ 0.33
PDZD4-202ENST00000393758 SNED1Q8TER0 1413 aa17.14■□□□□ 0.33
PDZD4-202ENST00000393758 TBX3O15119 743 aa17.14■□□□□ 0.33
PDZD4-202ENST00000393758 ECE1P42892 770 aa17.14■□□□□ 0.33
PDZD4-202ENST00000393758 NCALDP61601 193 aa17.14■□□□□ 0.33
PDZD4-202ENST00000393758 OVGP1Q12889 678 aa17.14■□□□□ 0.33
PDZD4-202ENST00000393758 AMIGO3Q86WK7 504 aa17.14■□□□□ 0.33
PDZD4-202ENST00000393758 CTAGE3PQ8IX95 158 aa17.14■□□□□ 0.33
PDZD4-202ENST00000393758 ZBED8Q8IZ13 594 aa17.14■□□□□ 0.33
PDZD4-202ENST00000393758 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.14■□□□□ 0.33
PDZD4-202ENST00000393758 DTX3LQ8TDB6 740 aa17.14■□□□□ 0.33
PDZD4-202ENST00000393758 KCNQ5Q9NR82 932 aa17.14■□□□□ 0.33
PDZD4-202ENST00000393758 ZDHHC18Q9NUE0 388 aa17.14■□□□□ 0.33
PDZD4-202ENST00000393758 CCPG1Q9ULG6 757 aa17.14■□□□□ 0.33
PDZD4-202ENST00000393758 NAALADL1Q9UQQ1 740 aa17.14■□□□□ 0.33
PDZD4-202ENST00000393758 CCND1P24385 295 aa17.13■□□□□ 0.33
PDZD4-202ENST00000393758 JAM2P57087 298 aa17.13■□□□□ 0.33
PDZD4-202ENST00000393758 GPS1Q13098 491 aa17.13■□□□□ 0.33
PDZD4-202ENST00000393758 SPARCL1Q14515 664 aa17.13■□□□□ 0.33
PDZD4-202ENST00000393758 LONP2Q86WA8 852 aa17.13■□□□□ 0.33
PDZD4-202ENST00000393758 CCDC89Q8N998 374 aa17.13■□□□□ 0.33
PDZD4-202ENST00000393758 SPIRE2Q8WWL2 714 aa17.13■□□□□ 0.33
PDZD4-202ENST00000393758 NPHS2Q9NP85 383 aa17.13■□□□□ 0.33
PDZD4-202ENST00000393758 RAB20Q9NX57 234 aa17.13■□□□□ 0.33
PDZD4-202ENST00000393758 EXOC7Q9UPT5 735 aa17.13■□□□□ 0.33
PDZD4-202ENST00000393758 PCDHB4Q9Y5E5 795 aa17.13■□□□□ 0.33
PDZD4-202ENST00000393758 ALS2Q96Q42 1657 aa17.13■□□□□ 0.33
PDZD4-202ENST00000393758 GTPBP10A4D1E9 387 aaKnown RBP17.13■□□□□ 0.33
PDZD4-202ENST00000393758 CDH16O75309 829 aa17.13■□□□□ 0.33
PDZD4-202ENST00000393758 GSTA1P08263 222 aa17.13■□□□□ 0.33
PDZD4-202ENST00000393758 TROVE2P10155 538 aaKnown RBP eCLIP17.13■□□□□ 0.33
PDZD4-202ENST00000393758 SREBF1P36956 1147 aa17.13■□□□□ 0.33
PDZD4-202ENST00000393758 RASSF2P50749 326 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms