RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 CTAGE9A4FU28 777 aa16.19■□□□□ 0.18
MKS1-202ENST00000393119 KIF3CO14782 793 aa16.19■□□□□ 0.18
MKS1-202ENST00000393119 KRT86O43790 486 aa16.19■□□□□ 0.18
MKS1-202ENST00000393119 STAT1P42224 750 aa16.19■□□□□ 0.18
MKS1-202ENST00000393119 DNA2P51530 1060 aa16.19■□□□□ 0.18
MKS1-202ENST00000393119 SNRPFP62306 86 aaKnown RBP16.19■□□□□ 0.18
MKS1-202ENST00000393119 TDRD10Q5VZ19 366 aaKnown RBP16.19■□□□□ 0.18
MKS1-202ENST00000393119 KRT39Q6A163 491 aa16.19■□□□□ 0.18
MKS1-202ENST00000393119 THNSL1Q8IYQ7 743 aa16.19■□□□□ 0.18
MKS1-202ENST00000393119 CPB2Q96IY4 423 aa16.19■□□□□ 0.18
MKS1-202ENST00000393119 ACO2Q99798 780 aaKnown RBP16.19■□□□□ 0.18
MKS1-202ENST00000393119 NUCKS1Q9H1E3 243 aaKnown RBP16.19■□□□□ 0.18
MKS1-202ENST00000393119 GPBP1L1Q9HC44 474 aaPredicted RBP16.19■□□□□ 0.18
MKS1-202ENST00000393119 RBAKQ9NYW8 714 aaPredicted RBP16.19■□□□□ 0.18
MKS1-202ENST00000393119 AKT3Q9Y243 479 aa16.19■□□□□ 0.18
MKS1-202ENST00000393119 ABLIM1O14639 778 aa16.19■□□□□ 0.18
MKS1-202ENST00000393119 CLDN3O15551 220 aa16.19■□□□□ 0.18
MKS1-202ENST00000393119 ZNF200P98182 395 aaPredicted RBP16.19■□□□□ 0.18
MKS1-202ENST00000393119 TRIM32Q13049 653 aa16.19■□□□□ 0.18
MKS1-202ENST00000393119 KIAA0753Q2KHM9 967 aa16.19■□□□□ 0.18
MKS1-202ENST00000393119 U2AF1L4Q8WU68 220 aaKnown RBP16.19■□□□□ 0.18
MKS1-202ENST00000393119 SECISBP2LQ93073 1101 aaKnown RBP16.19■□□□□ 0.18
MKS1-202ENST00000393119 NAPGQ99747 312 aaPredicted RBP16.19■□□□□ 0.18
MKS1-202ENST00000393119 SEPT11Q9NVA2 429 aaKnown RBP16.19■□□□□ 0.18
MKS1-202ENST00000393119 RAB20Q9NX57 234 aa16.19■□□□□ 0.18
MKS1-202ENST00000393119 NAGPAQ9UK23 515 aa16.19■□□□□ 0.18
MKS1-202ENST00000393119 GABRQQ9UN88 632 aa16.19■□□□□ 0.18
MKS1-202ENST00000393119 EVPLQ92817 2033 aa16.18■□□□□ 0.18
MKS1-202ENST00000393119 TNPO2O14787 897 aaKnown RBP16.18■□□□□ 0.18
MKS1-202ENST00000393119 FAM189A1O60320 539 aa16.18■□□□□ 0.18
MKS1-202ENST00000393119 PPFIA4O75335 1185 aa16.18■□□□□ 0.18
MKS1-202ENST00000393119 SGPL1O95470 568 aa16.18■□□□□ 0.18
MKS1-202ENST00000393119 VNN1O95497 513 aa16.18■□□□□ 0.18
MKS1-202ENST00000393119 SSTR3P32745 418 aaPredicted RBP16.18■□□□□ 0.18
MKS1-202ENST00000393119 NAP1L1P55209 391 aaKnown RBP16.18■□□□□ 0.18
MKS1-202ENST00000393119 CDCA2Q69YH5 1023 aaPredicted RBP16.18■□□□□ 0.18
MKS1-202ENST00000393119 HELQQ8TDG4 1101 aa16.18■□□□□ 0.18
MKS1-202ENST00000393119 USP6NLQ92738 828 aa16.18■□□□□ 0.18
MKS1-202ENST00000393119 CAPZA3Q96KX2 299 aa16.18■□□□□ 0.18
MKS1-202ENST00000393119 TMEM134Q9H6X4 195 aa16.18■□□□□ 0.18
MKS1-202ENST00000393119 CDHR5Q9HBB8 845 aa16.18■□□□□ 0.18
MKS1-202ENST00000393119 TMEM8AQ9HCN3 771 aa16.18■□□□□ 0.18
MKS1-202ENST00000393119 FBXL5Q9UKA1 691 aa16.18■□□□□ 0.18
MKS1-202ENST00000393119 PACSIN2Q9UNF0 486 aaPredicted RBP16.18■□□□□ 0.18
MKS1-202ENST00000393119 GNEQ9Y223 722 aaKnown RBP16.18■□□□□ 0.18
MKS1-202ENST00000393119 MAPK13O15264 365 aa16.18■□□□□ 0.18
MKS1-202ENST00000393119 CYP26A1O43174 497 aa16.18■□□□□ 0.18
MKS1-202ENST00000393119 CXCR5P32302 372 aa16.18■□□□□ 0.18
MKS1-202ENST00000393119 MBTD1Q05BQ5 628 aa16.18■□□□□ 0.18
MKS1-202ENST00000393119 PRPF4BQ13523 1007 aaKnown RBP16.18■□□□□ 0.18
MKS1-202ENST00000393119 MTHFD1LQ6UB35 978 aa16.18■□□□□ 0.18
MKS1-202ENST00000393119 SLC47A2Q86VL8 602 aa16.18■□□□□ 0.18
MKS1-202ENST00000393119 KAT2BQ92831 832 aa16.18■□□□□ 0.18
MKS1-202ENST00000393119 FAM49AQ9H0Q0 323 aaPredicted RBP16.18■□□□□ 0.18
MKS1-202ENST00000393119 ST7Q9NRC1 585 aa16.18■□□□□ 0.18
MKS1-202ENST00000393119 RNF19AQ9NV58 838 aa16.18■□□□□ 0.18
MKS1-202ENST00000393119 SMARCAL1Q9NZC9 954 aa16.18■□□□□ 0.18
MKS1-202ENST00000393119 UMODL1Q5DID0 1318 aa16.17■□□□□ 0.18
MKS1-202ENST00000393119 CNTNAP2Q9UHC6 1331 aa16.17■□□□□ 0.18
MKS1-202ENST00000393119 ZSWIM8A7E2V4 1837 aa16.17■□□□□ 0.18
MKS1-202ENST00000393119 LOC102724159A0A0B4J2E5 919 aa16.17■□□□□ 0.18
MKS1-202ENST00000393119 MYADML2A6NDP7 307 aa16.17■□□□□ 0.18
MKS1-202ENST00000393119 PIGRP01833 764 aa16.17■□□□□ 0.18
MKS1-202ENST00000393119 PRKCIP41743 596 aa16.17■□□□□ 0.18
MKS1-202ENST00000393119 AMPD2Q01433 879 aa16.17■□□□□ 0.18
MKS1-202ENST00000393119 PPFIA1Q13136 1202 aa16.17■□□□□ 0.18
MKS1-202ENST00000393119 MXD4Q14582 209 aaPredicted RBP16.17■□□□□ 0.18
MKS1-202ENST00000393119 PWP2Q15269 919 aaKnown RBP16.17■□□□□ 0.18
MKS1-202ENST00000393119 GRIK4Q16099 956 aa16.17■□□□□ 0.18
MKS1-202ENST00000393119 MAPK6Q16659 721 aa16.17■□□□□ 0.18
MKS1-202ENST00000393119 ALKBH5Q6P6C2 394 aaKnown RBP16.17■□□□□ 0.18
MKS1-202ENST00000393119 FBXL13Q8NEE6 735 aa16.17■□□□□ 0.18
MKS1-202ENST00000393119 TRPV1Q8NER1 839 aa16.17■□□□□ 0.18
MKS1-202ENST00000393119 TCP11Q8WWU5 503 aa16.17■□□□□ 0.18
MKS1-202ENST00000393119 EMID1Q96A84 441 aaPredicted RBP16.17■□□□□ 0.18
MKS1-202ENST00000393119 FNBP1Q96RU3 617 aa16.17■□□□□ 0.18
MKS1-202ENST00000393119 EHD2Q9NZN4 543 aa16.17■□□□□ 0.18
MKS1-202ENST00000393119 CST3P01034 146 aaPredicted RBP16.16■□□□□ 0.18
MKS1-202ENST00000393119 C4BPAP04003 597 aaKnown RBP16.16■□□□□ 0.18
MKS1-202ENST00000393119 TUBB4AP04350 444 aa16.16■□□□□ 0.18
MKS1-202ENST00000393119 SLC26A2P50443 739 aa16.16■□□□□ 0.18
MKS1-202ENST00000393119 BIRC3Q13489 604 aa16.16■□□□□ 0.18
MKS1-202ENST00000393119 KCTD19Q17RG1 926 aaPredicted RBP16.16■□□□□ 0.18
MKS1-202ENST00000393119 TMEM132AQ24JP5 1023 aa16.16■□□□□ 0.18
MKS1-202ENST00000393119 IQSEC1Q6DN90 963 aa16.16■□□□□ 0.18
MKS1-202ENST00000393119 TLK2Q86UE8 772 aa16.16■□□□□ 0.18
MKS1-202ENST00000393119 TMC2Q8TDI7 906 aa16.16■□□□□ 0.18
MKS1-202ENST00000393119 ZFYVE28Q9HCC9 887 aa16.16■□□□□ 0.18
MKS1-202ENST00000393119 CALCOCO1Q9P1Z2 691 aa16.16■□□□□ 0.18
MKS1-202ENST00000393119 TRPM7Q96QT4 1865 aa16.16■□□□□ 0.18
MKS1-202ENST00000393119 H0YCG3 227 aa16.16■□□□□ 0.18
MKS1-202ENST00000393119 MEFVO15553 781 aaPredicted RBP16.16■□□□□ 0.18
MKS1-202ENST00000393119 CLSTN1O94985 981 aa16.16■□□□□ 0.18
MKS1-202ENST00000393119 ABCB4P21439 1286 aa16.16■□□□□ 0.18
MKS1-202ENST00000393119 PTENP60484 403 aa16.16■□□□□ 0.18
MKS1-202ENST00000393119 PSMD6Q15008 389 aa16.16■□□□□ 0.18
MKS1-202ENST00000393119 KIZQ2M2Z5 673 aa16.16■□□□□ 0.18
MKS1-202ENST00000393119 LINC01465Q8N7H1 131 aa16.16■□□□□ 0.18
MKS1-202ENST00000393119 SYT11Q9BT88 431 aa16.16■□□□□ 0.18
MKS1-202ENST00000393119 MRPL4Q9BYD3 311 aaKnown RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms