RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 MBNL2Q5VZF2 373 aaKnown RBP3.89□□□□□ -1.79
XRN1-202ENST00000392981 KIF18BQ86Y91 864 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 NOSTRINQ8IVI9 506 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 RASSF8Q8NHQ8 419 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 TBC1D22AQ8WUA7 517 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 RAPGEF4Q8WZA2 1011 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 SYTL4Q96C24 671 aaPredicted RBP3.89□□□□□ -1.79
XRN1-202ENST00000392981 TRAPPC9Q96Q05 1148 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 ZDHHC5Q9C0B5 715 aa3.89□□□□□ -1.79
XRN1-202ENST00000392981 USP34Q70CQ2 3546 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 FERP16591 822 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 NOP2P46087 812 aaKnown RBP3.88□□□□□ -1.79
XRN1-202ENST00000392981 PCSK7Q16549 785 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 ACAD10Q6JQN1 1059 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 IGF2-ASQ6U949 168 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 C12orf50Q8NA57 414 aaPredicted RBP3.88□□□□□ -1.79
XRN1-202ENST00000392981 FBXO18Q8NFZ0 1043 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 OR8H1Q8NGG4 311 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 TXLNGYQ9BZA5 131 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 TCF7L1Q9HCS4 588 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 DCP1AQ9NPI6 582 aaPredicted RBP3.88□□□□□ -1.79
XRN1-202ENST00000392981 WASH6PQ9NQA3 447 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 RBM28Q9NW13 759 aaKnown RBP3.88□□□□□ -1.79
XRN1-202ENST00000392981 TJP2Q9UDY2 1190 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 PPIEQ9UNP9 301 aaKnown RBP3.88□□□□□ -1.79
XRN1-202ENST00000392981 SNX8Q9Y5X2 465 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 THOC2Q8NI27 1593 aaKnown RBP3.88□□□□□ -1.79
XRN1-202ENST00000392981 C19orf81C9J6K1 198 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 DDX39AO00148 427 aaKnown RBP3.88□□□□□ -1.79
XRN1-202ENST00000392981 IFNGR1P15260 489 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 AGXTP21549 392 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 PRKCIP41743 596 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 RRP1P56182 461 aaKnown RBP3.88□□□□□ -1.79
XRN1-202ENST00000392981 JAM2P57087 298 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 RAB1AP62820 205 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 SNW1Q13573 536 aaKnown RBP3.88□□□□□ -1.79
XRN1-202ENST00000392981 MOGSQ13724 837 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 SYT13Q7L8C5 426 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 KIAA2013Q8IYS2 634 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 SETD6Q8TBK2 473 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 KCTD5Q9NXV2 234 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 MARCH2Q9P0N8 246 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 ZNF624Q9P2J8 865 aaPredicted RBP3.88□□□□□ -1.79
XRN1-202ENST00000392981 BAG5Q9UL15 447 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 L1RE1Q9UN81 338 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 TISP43B9A030 160 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 B9A039 149 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 ZBTB43O43298 467 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 RARBP10826 455 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 FDPSP14324 419 aaKnown RBP3.88□□□□□ -1.79
XRN1-202ENST00000392981 PSMA4P25789 261 aaKnown RBP3.88□□□□□ -1.79
XRN1-202ENST00000392981 DCAF7P61962 342 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 RPS16P62249 146 aaKnown RBP3.88□□□□□ -1.79
XRN1-202ENST00000392981 PPA1Q15181 289 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 CTXN3Q4LDR2 81 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 NAA16Q6N069 864 aaPredicted RBP3.88□□□□□ -1.79
XRN1-202ENST00000392981 ALKBH5Q6P6C2 394 aaKnown RBP3.88□□□□□ -1.79
XRN1-202ENST00000392981 BTNL9Q6UXG8 535 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 RGS9BPQ6ZS82 235 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 DIS3L2Q8IYB7 885 aaKnown RBP3.88□□□□□ -1.79
XRN1-202ENST00000392981 ZNF610Q8N9Z0 462 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 SMARCE1Q969G3 411 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 SAT2Q96F10 170 aaPredicted RBP3.88□□□□□ -1.79
XRN1-202ENST00000392981 CLPTM1LQ96KA5 538 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 CDK15Q96Q40 435 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 SLC4A5Q9BY07 1137 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 WNT10AQ9GZT5 417 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 TOR4AQ9NXH8 423 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 PDP2Q9P2J9 529 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 APPL1Q9UKG1 709 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 PADI4Q9UM07 663 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 ARPC4-TTLL3A0A0A6YYG9 625 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 FAM234BA2RU67 622 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 RGS10O43665 173 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 RAC2P15153 192 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 ENPP1P22413 925 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 BCL6P41182 706 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 GPR3P46089 330 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 MAP2K6P52564 334 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 ERV3-1Q14264 604 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 MED22Q15528 200 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 ZSCAN23Q3MJ62 389 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 TAF3Q5VWG9 929 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 TMC6Q7Z403 805 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 HEATR3Q7Z4Q2 680 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 CPT1CQ8TCG5 803 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 APIPQ96GX9 242 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 UTP14AQ9BVJ6 771 aaKnown RBP3.88□□□□□ -1.79
XRN1-202ENST00000392981 TMEM120AQ9BXJ8 343 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 CELF4Q9BZC1 486 aaKnown RBP3.88□□□□□ -1.79
XRN1-202ENST00000392981 SH2D4AQ9H788 454 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 SERHLQ9NQF3 203 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 TMEM51Q9NW97 253 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 USP19O94966 1318 aa3.88□□□□□ -1.79
XRN1-202ENST00000392981 CCDC196A0A1B0GTZ2 297 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 BHMG1C9JSJ3 638 aaPredicted RBP3.87□□□□□ -1.79
XRN1-202ENST00000392981 TRAF5O00463 557 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 DLL1O00548 723 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 MSCO60682 206 aa3.87□□□□□ -1.79
XRN1-202ENST00000392981 CNOT4O95628 575 aaKnown RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms