RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 CTSAP10619 480 aa12.98□□□□□ -0.33
RFC4-202ENST00000392481 MCF2P10911 925 aa12.98□□□□□ -0.33
RFC4-202ENST00000392481 PROZP22891 400 aa12.98□□□□□ -0.33
RFC4-202ENST00000392481 HOXD11P31277 338 aaPredicted RBP12.98□□□□□ -0.33
RFC4-202ENST00000392481 STAT6P42226 847 aa12.98□□□□□ -0.33
RFC4-202ENST00000392481 OR1G1P47890 313 aa12.98□□□□□ -0.33
RFC4-202ENST00000392481 DLX2Q07687 328 aaPredicted RBP12.98□□□□□ -0.33
RFC4-202ENST00000392481 ZNF568Q3ZCX4 644 aa12.98□□□□□ -0.33
RFC4-202ENST00000392481 PTCRAQ6ISU1 281 aaPredicted RBP12.98□□□□□ -0.33
RFC4-202ENST00000392481 MPZL3Q6UWV2 235 aa12.98□□□□□ -0.33
RFC4-202ENST00000392481 SV2BQ7L1I2 683 aa12.98□□□□□ -0.33
RFC4-202ENST00000392481 HAUS6Q7Z4H7 955 aa12.98□□□□□ -0.33
RFC4-202ENST00000392481 KCNG4Q8TDN1 519 aa12.98□□□□□ -0.33
RFC4-202ENST00000392481 UHRF1Q96T88 793 aaPredicted RBP12.98□□□□□ -0.33
RFC4-202ENST00000392481 TCHPQ9BT92 498 aa12.98□□□□□ -0.33
RFC4-202ENST00000392481 VN1R3Q9BXE9 311 aa12.98□□□□□ -0.33
RFC4-202ENST00000392481 ZBP1Q9H171 429 aa12.98□□□□□ -0.33
RFC4-202ENST00000392481 CFAP45Q9UL16 551 aa12.98□□□□□ -0.33
RFC4-202ENST00000392481 FAM50BQ9Y247 325 aa12.98□□□□□ -0.33
RFC4-202ENST00000392481 GDAQ9Y2T3 454 aa12.98□□□□□ -0.33
RFC4-202ENST00000392481 PRG3Q9Y2Y8 225 aaPredicted RBP12.98□□□□□ -0.33
RFC4-202ENST00000392481 IRAK3Q9Y616 596 aa12.98□□□□□ -0.33
RFC4-202ENST00000392481 A0A087X0B3 334 aa12.97□□□□□ -0.33
RFC4-202ENST00000392481 GRXCR2A6NFK2 248 aa12.97□□□□□ -0.33
RFC4-202ENST00000392481 ABLIM1O14639 778 aa12.97□□□□□ -0.33
RFC4-202ENST00000392481 PTGESO14684 152 aa12.97□□□□□ -0.33
RFC4-202ENST00000392481 TRAK2O60296 914 aa12.97□□□□□ -0.33
RFC4-202ENST00000392481 CUTAO60888 179 aa12.97□□□□□ -0.33
RFC4-202ENST00000392481 THP07101 528 aa12.97□□□□□ -0.33
RFC4-202ENST00000392481 ABCD1P33897 745 aa12.97□□□□□ -0.33
RFC4-202ENST00000392481 GRM5P41594 1212 aa12.97□□□□□ -0.33
RFC4-202ENST00000392481 NDUFV1P49821 464 aa12.97□□□□□ -0.33
RFC4-202ENST00000392481 TUSC3Q13454 348 aa12.97□□□□□ -0.33
RFC4-202ENST00000392481 FOXD4L6Q3SYB3 417 aaPredicted RBP12.97□□□□□ -0.33
RFC4-202ENST00000392481 FOXD4L3Q6VB84 417 aaPredicted RBP12.97□□□□□ -0.33
RFC4-202ENST00000392481 FAM178BQ8IXR5 827 aa12.97□□□□□ -0.33
RFC4-202ENST00000392481 MSLNLQ96KJ4 702 aa12.97□□□□□ -0.33
RFC4-202ENST00000392481 CCDC94Q9BW85 323 aaPredicted RBP12.97□□□□□ -0.33
RFC4-202ENST00000392481 COLEC11Q9BWP8 271 aa12.97□□□□□ -0.33
RFC4-202ENST00000392481 PANK2Q9BZ23 570 aa12.97□□□□□ -0.33
RFC4-202ENST00000392481 ZHX3Q9H4I2 956 aa12.97□□□□□ -0.33
RFC4-202ENST00000392481 TOPORSQ9NS56 1045 aaPredicted RBP12.97□□□□□ -0.33
RFC4-202ENST00000392481 MARCH5Q9NX47 278 aa12.97□□□□□ -0.33
RFC4-202ENST00000392481 CLEC1BQ9P126 229 aa12.97□□□□□ -0.33
RFC4-202ENST00000392481 C5orf42Q9H799 3197 aa12.97□□□□□ -0.33
RFC4-202ENST00000392481 TRIP11Q15643 1979 aa12.97□□□□□ -0.33
RFC4-202ENST00000392481 GLP2RO95838 553 aa12.96□□□□□ -0.33
RFC4-202ENST00000392481 EFEMP2O95967 443 aa12.96□□□□□ -0.33
RFC4-202ENST00000392481 YARSP54577 528 aaKnown RBP12.96□□□□□ -0.33
RFC4-202ENST00000392481 KCNC3Q14003 757 aa12.96□□□□□ -0.33
RFC4-202ENST00000392481 BECN1Q14457 450 aa12.96□□□□□ -0.33
RFC4-202ENST00000392481 AXDND1Q5T1B0 1012 aaPredicted RBP12.96□□□□□ -0.33
RFC4-202ENST00000392481 TMEM184AQ6ZMB5 413 aa12.96□□□□□ -0.33
RFC4-202ENST00000392481 ZBTB33Q86T24 672 aa12.96□□□□□ -0.33
RFC4-202ENST00000392481 DDX12PQ92771 950 aa12.96□□□□□ -0.33
RFC4-202ENST00000392481 ZBTB45Q96K62 511 aaPredicted RBP12.96□□□□□ -0.33
RFC4-202ENST00000392481 FIZ1Q96SL8 496 aa12.96□□□□□ -0.33
RFC4-202ENST00000392481 CD207Q9UJ71 328 aa12.96□□□□□ -0.33
RFC4-202ENST00000392481 TBX20Q9UMR3 447 aa12.96□□□□□ -0.33
RFC4-202ENST00000392481 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.96□□□□□ -0.34
RFC4-202ENST00000392481 MYMKA6NI61 221 aa12.96□□□□□ -0.34
RFC4-202ENST00000392481 K7ENM7 598 aa12.96□□□□□ -0.34
RFC4-202ENST00000392481 CLDN3O15551 220 aa12.96□□□□□ -0.34
RFC4-202ENST00000392481 SOD2P04179 222 aa12.96□□□□□ -0.34
RFC4-202ENST00000392481 SRGAP2BP0DMP2 458 aa12.96□□□□□ -0.34
RFC4-202ENST00000392481 GAP43P17677 238 aa12.96□□□□□ -0.34
RFC4-202ENST00000392481 ME1P48163 572 aa12.96□□□□□ -0.34
RFC4-202ENST00000392481 GTF2BQ00403 316 aa12.96□□□□□ -0.34
RFC4-202ENST00000392481 DNM1Q05193 864 aaKnown RBP12.96□□□□□ -0.34
RFC4-202ENST00000392481 MCL1Q07820 350 aa12.96□□□□□ -0.34
RFC4-202ENST00000392481 COASYQ13057 564 aa12.96□□□□□ -0.34
RFC4-202ENST00000392481 SMAD4Q13485 552 aaKnown RBP12.96□□□□□ -0.34
RFC4-202ENST00000392481 NOLC1Q14978 699 aaKnown RBP eCLIP12.96□□□□□ -0.34
RFC4-202ENST00000392481 PTPN14Q15678 1187 aa12.96□□□□□ -0.34
RFC4-202ENST00000392481 NAB2Q15742 525 aa12.96□□□□□ -0.34
RFC4-202ENST00000392481 CLUL1Q15846 466 aa12.96□□□□□ -0.34
RFC4-202ENST00000392481 XKR4Q5GH76 650 aa12.96□□□□□ -0.34
RFC4-202ENST00000392481 ALKAL1Q6UXT8 129 aa12.96□□□□□ -0.34
RFC4-202ENST00000392481 DYMQ7RTS9 669 aa12.96□□□□□ -0.34
RFC4-202ENST00000392481 RNF168Q8IYW5 571 aaPredicted RBP12.96□□□□□ -0.34
RFC4-202ENST00000392481 PDILTQ8N807 584 aa12.96□□□□□ -0.34
RFC4-202ENST00000392481 CEP120Q8N960 986 aa12.96□□□□□ -0.34
RFC4-202ENST00000392481 TMEM87AQ8NBN3 555 aa12.96□□□□□ -0.34
RFC4-202ENST00000392481 VN1R2Q8NFZ6 395 aa12.96□□□□□ -0.34
RFC4-202ENST00000392481 AUTS2Q8WXX7 1259 aa12.96□□□□□ -0.34
RFC4-202ENST00000392481 DNAJC19Q96DA6 116 aa12.96□□□□□ -0.34
RFC4-202ENST00000392481 BICD1Q96G01 975 aa12.96□□□□□ -0.34
RFC4-202ENST00000392481 ACAP3Q96P50 834 aa12.96□□□□□ -0.34
RFC4-202ENST00000392481 NECAB3Q96P71 396 aaPredicted RBP12.96□□□□□ -0.34
RFC4-202ENST00000392481 CXCL16Q9H2A7 254 aa12.96□□□□□ -0.34
RFC4-202ENST00000392481 CUEDC2Q9H467 287 aa12.96□□□□□ -0.34
RFC4-202ENST00000392481 ST6GALNAC4Q9H4F1 302 aa12.96□□□□□ -0.34
RFC4-202ENST00000392481 ANKFY1Q9P2R3 1169 aa12.96□□□□□ -0.34
RFC4-202ENST00000392481 SEL1LQ9UBV2 794 aa12.96□□□□□ -0.34
RFC4-202ENST00000392481 RCOR1Q9UKL0 485 aa12.96□□□□□ -0.34
RFC4-202ENST00000392481 ADAM28Q9UKQ2 775 aa12.96□□□□□ -0.34
RFC4-202ENST00000392481 CITO14578 2027 aa12.95□□□□□ -0.34
RFC4-202ENST00000392481 F8W810 466 aa12.95□□□□□ -0.34
RFC4-202ENST00000392481 HNRNPDLO14979 420 aaKnown RBP12.95□□□□□ -0.34
RFC4-202ENST00000392481 LILRB3O75022 631 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms