RNA–Protein interactions for RNA: ENST00000391944.7

ERCC2-203, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 2,334 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-203ENST00000391944 FNBP1Q96RU3 617 aa20.59■□□□□ 0.89
ERCC2-203ENST00000391944 PCDHB18PQ96TA0 734 aa20.59■□□□□ 0.89
ERCC2-203ENST00000391944 VIPAS39Q9H9C1 493 aa20.59■□□□□ 0.89
ERCC2-203ENST00000391944 A0A0B4J269 797 aa20.58■□□□□ 0.89
ERCC2-203ENST00000391944 LOC102724159A0A0B4J2E5 919 aa20.58■□□□□ 0.89
ERCC2-203ENST00000391944 OAS2P29728 719 aaKnown RBP20.58■□□□□ 0.89
ERCC2-203ENST00000391944 ACOT2P49753 483 aa20.58■□□□□ 0.89
ERCC2-203ENST00000391944 ERVK-9P63128 1117 aa20.58■□□□□ 0.89
ERCC2-203ENST00000391944 PWP2Q15269 919 aaKnown RBP20.58■□□□□ 0.89
ERCC2-203ENST00000391944 PTPROQ16827 1216 aa20.58■□□□□ 0.89
ERCC2-203ENST00000391944 ZACNQ401N2 412 aa20.58■□□□□ 0.89
ERCC2-203ENST00000391944 PLPPR4Q7Z2D5 763 aa20.58■□□□□ 0.89
ERCC2-203ENST00000391944 SHCBP1Q8NEM2 672 aa20.58■□□□□ 0.89
ERCC2-203ENST00000391944 GLG1Q92896 1179 aa20.58■□□□□ 0.89
ERCC2-203ENST00000391944 FAM81BQ96LP2 452 aa20.58■□□□□ 0.89
ERCC2-203ENST00000391944 TAF1DQ9H5J8 278 aaPredicted RBP20.58■□□□□ 0.89
ERCC2-203ENST00000391944 GLTPD2A6NH11 291 aa20.58■□□□□ 0.88
ERCC2-203ENST00000391944 NOP56O00567 594 aaKnown RBP20.58■□□□□ 0.88
ERCC2-203ENST00000391944 CEP104O60308 925 aa20.58■□□□□ 0.88
ERCC2-203ENST00000391944 CYP11B1P15538 503 aa20.58■□□□□ 0.88
ERCC2-203ENST00000391944 RNASE9P60153 205 aaKnown RBP20.58■□□□□ 0.88
ERCC2-203ENST00000391944 GPC5P78333 572 aa20.58■□□□□ 0.88
ERCC2-203ENST00000391944 DRP2Q13474 957 aa20.58■□□□□ 0.88
ERCC2-203ENST00000391944 EAPPQ56P03 285 aaPredicted RBP20.58■□□□□ 0.88
ERCC2-203ENST00000391944 IER5Q5VY09 327 aa20.58■□□□□ 0.88
ERCC2-203ENST00000391944 PRPF31Q8WWY3 499 aaKnown RBP20.58■□□□□ 0.88
ERCC2-203ENST00000391944 PDE11AQ9HCR9 933 aa20.58■□□□□ 0.88
ERCC2-203ENST00000391944 COG5Q9UP83 839 aa20.58■□□□□ 0.88
ERCC2-203ENST00000391944 C4BPAP04003 597 aaKnown RBP20.57■□□□□ 0.88
ERCC2-203ENST00000391944 MRPS25P82663 173 aaKnown RBP20.57■□□□□ 0.88
ERCC2-203ENST00000391944 TERF2Q15554 542 aa20.57■□□□□ 0.88
ERCC2-203ENST00000391944 WDR78Q5VTH9 848 aa20.57■□□□□ 0.88
ERCC2-203ENST00000391944 RASGEF1CQ8N431 466 aa20.57■□□□□ 0.88
ERCC2-203ENST00000391944 AENQ8WTP8 325 aaKnown RBP20.57■□□□□ 0.88
ERCC2-203ENST00000391944 SCFD2Q8WU76 684 aa20.57■□□□□ 0.88
ERCC2-203ENST00000391944 SLC10A4Q96EP9 437 aa20.57■□□□□ 0.88
ERCC2-203ENST00000391944 HINFPQ9BQA5 517 aa20.57■□□□□ 0.88
ERCC2-203ENST00000391944 MSTO1Q9BUK6 570 aa20.57■□□□□ 0.88
ERCC2-203ENST00000391944 ACP6Q9NPH0 428 aa20.57■□□□□ 0.88
ERCC2-203ENST00000391944 MCM3APO60318 1980 aa20.57■□□□□ 0.88
ERCC2-203ENST00000391944 GAS2O43903 313 aaKnown RBP20.56■□□□□ 0.88
ERCC2-203ENST00000391944 EDN1P05305 212 aa20.56■□□□□ 0.88
ERCC2-203ENST00000391944 TNNI1P19237 187 aa20.56■□□□□ 0.88
ERCC2-203ENST00000391944 TNFRSF8P28908 595 aa20.56■□□□□ 0.88
ERCC2-203ENST00000391944 WNT7BP56706 349 aa20.56■□□□□ 0.88
ERCC2-203ENST00000391944 FMO1Q01740 532 aa20.56■□□□□ 0.88
ERCC2-203ENST00000391944 TAF3Q5VWG9 929 aa20.56■□□□□ 0.88
ERCC2-203ENST00000391944 DHX37Q8IY37 1157 aaKnown RBP20.56■□□□□ 0.88
ERCC2-203ENST00000391944 EXOC8Q8IYI6 725 aa20.56■□□□□ 0.88
ERCC2-203ENST00000391944 ATP8B4Q8TF62 1192 aa20.56■□□□□ 0.88
ERCC2-203ENST00000391944 PI4K2AQ9BTU6 479 aa20.56■□□□□ 0.88
ERCC2-203ENST00000391944 RBAKQ9NYW8 714 aaPredicted RBP20.56■□□□□ 0.88
ERCC2-203ENST00000391944 ADGRA2Q96PE1 1338 aa20.56■□□□□ 0.88
ERCC2-203ENST00000391944 PGRMC1O00264 195 aaKnown RBP20.56■□□□□ 0.88
ERCC2-203ENST00000391944 MMEP08473 750 aa20.56■□□□□ 0.88
ERCC2-203ENST00000391944 EFNA5P52803 228 aa20.56■□□□□ 0.88
ERCC2-203ENST00000391944 TNNC1P63316 161 aa20.56■□□□□ 0.88
ERCC2-203ENST00000391944 CDR2Q01850 454 aa20.56■□□□□ 0.88
ERCC2-203ENST00000391944 ZPBP2Q6X784 338 aa20.56■□□□□ 0.88
ERCC2-203ENST00000391944 FBXO16Q8IX29 292 aaPredicted RBP20.56■□□□□ 0.88
ERCC2-203ENST00000391944 KRT12Q99456 494 aa20.56■□□□□ 0.88
ERCC2-203ENST00000391944 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.56■□□□□ 0.882e-6■■■□□ 16.7
ERCC2-203ENST00000391944 ACBD3Q9H3P7 528 aa20.56■□□□□ 0.88
ERCC2-203ENST00000391944 ZBTB42B2RXF5 422 aa20.55■□□□□ 0.88
ERCC2-203ENST00000391944 MARK3P27448 753 aa20.55■□□□□ 0.88
ERCC2-203ENST00000391944 TNNT3P45378 269 aaPredicted RBP20.55■□□□□ 0.88
ERCC2-203ENST00000391944 PDE6CP51160 858 aa20.55■□□□□ 0.88
ERCC2-203ENST00000391944 TRIM50Q86XT4 487 aa20.55■□□□□ 0.88
ERCC2-203ENST00000391944 GSPT2Q8IYD1 628 aaKnown RBP20.55■□□□□ 0.88
ERCC2-203ENST00000391944 TCP11Q8WWU5 503 aa20.55■□□□□ 0.88
ERCC2-203ENST00000391944 DDX1Q92499 740 aaKnown RBP20.55■□□□□ 0.88
ERCC2-203ENST00000391944 DHX38Q92620 1227 aaKnown RBP20.55■□□□□ 0.88
ERCC2-203ENST00000391944 SPATA33Q96N06 139 aa20.55■□□□□ 0.88
ERCC2-203ENST00000391944 C1orf112Q9NSG2 853 aa20.55■□□□□ 0.88
ERCC2-203ENST00000391944 ANKFY1Q9P2R3 1169 aa20.55■□□□□ 0.88
ERCC2-203ENST00000391944 PNMA3Q9UL41 463 aa20.55■□□□□ 0.88
ERCC2-203ENST00000391944 SCN4AP35499 1836 aa20.55■□□□□ 0.88
ERCC2-203ENST00000391944 IGKV6-21A0A0C4DH24 114 aa20.55■□□□□ 0.88
ERCC2-203ENST00000391944 H3BQF6 201 aa20.55■□□□□ 0.88
ERCC2-203ENST00000391944 MKRN4PQ13434 485 aaPredicted RBP20.55■□□□□ 0.88
ERCC2-203ENST00000391944 TDRD10Q5VZ19 366 aaKnown RBP20.55■□□□□ 0.88
ERCC2-203ENST00000391944 LMBRD2Q68DH5 695 aaPredicted RBP20.55■□□□□ 0.88
ERCC2-203ENST00000391944 GTF3C2Q8WUA4 911 aaPredicted RBP20.55■□□□□ 0.88
ERCC2-203ENST00000391944 ELMO3Q96BJ8 720 aa20.55■□□□□ 0.88
ERCC2-203ENST00000391944 FAM84AQ96KN4 292 aa20.55■□□□□ 0.88
ERCC2-203ENST00000391944 ZCCHC17Q9NP64 241 aaKnown RBP20.55■□□□□ 0.88
ERCC2-203ENST00000391944 DIS3Q9Y2L1 958 aaKnown RBP20.55■□□□□ 0.88
ERCC2-203ENST00000391944 ZC3H4Q9UPT8 1303 aaKnown RBP20.54■□□□□ 0.88
ERCC2-203ENST00000391944 IQCA1LA6NCM1 817 aa20.54■□□□□ 0.88
ERCC2-203ENST00000391944 ASB14A6NK59 587 aa20.54■□□□□ 0.88
ERCC2-203ENST00000391944 POLR3GO15318 223 aaPredicted RBP20.54■□□□□ 0.88
ERCC2-203ENST00000391944 HLA-DRAP01903 254 aa20.54■□□□□ 0.88
ERCC2-203ENST00000391944 SLC26A2P50443 739 aa20.54■□□□□ 0.88
ERCC2-203ENST00000391944 MXD4Q14582 209 aaPredicted RBP20.54■□□□□ 0.88
ERCC2-203ENST00000391944 PLCB4Q15147 1175 aa20.54■□□□□ 0.88
ERCC2-203ENST00000391944 WDR44Q5JSH3 913 aa20.54■□□□□ 0.88
ERCC2-203ENST00000391944 IFT20Q8IY31 132 aa20.54■□□□□ 0.88
ERCC2-203ENST00000391944 GDF3Q9NR23 364 aa20.54■□□□□ 0.88
ERCC2-203ENST00000391944 CTTNBP2NLQ9P2B4 639 aa20.54■□□□□ 0.88
ERCC2-203ENST00000391944 PTPRJQ12913 1337 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms