RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 ELF4Q99607 663 aaPredicted RBP2.4□□□□□ -2.03
RNU6-239P-201ENST00000390990 TIMP4Q99727 224 aa2.4□□□□□ -2.03
RNU6-239P-201ENST00000390990 TINF2Q9BSI4 451 aa2.4□□□□□ -2.03
RNU6-239P-201ENST00000390990 HIRIP3Q9BW71 556 aaPredicted RBP2.4□□□□□ -2.03
RNU6-239P-201ENST00000390990 CPNE5Q9HCH3 593 aa2.4□□□□□ -2.03
RNU6-239P-201ENST00000390990 TBCCD1Q9NVR7 557 aa2.4□□□□□ -2.03
RNU6-239P-201ENST00000390990 MTMR4Q9NYA4 1195 aa2.4□□□□□ -2.03
RNU6-239P-201ENST00000390990 PCDHB6Q9Y5E3 794 aa2.4□□□□□ -2.03
RNU6-239P-201ENST00000390990 NOX1Q9Y5S8 564 aa2.4□□□□□ -2.03
RNU6-239P-201ENST00000390990 AOX1Q06278 1338 aa2.4□□□□□ -2.03
RNU6-239P-201ENST00000390990 ZNF521Q96K83 1311 aa2.4□□□□□ -2.03
RNU6-239P-201ENST00000390990 UNCXA6NJT0 531 aa2.39□□□□□ -2.03
RNU6-239P-201ENST00000390990 KCNQ2O43526 872 aa2.39□□□□□ -2.03
RNU6-239P-201ENST00000390990 PRKCGP05129 697 aa2.39□□□□□ -2.03
RNU6-239P-201ENST00000390990 RBM25P49756 843 aaKnown RBP2.39□□□□□ -2.03
RNU6-239P-201ENST00000390990 CXADRP78310 365 aa2.39□□□□□ -2.03
RNU6-239P-201ENST00000390990 EXOSC10Q01780 885 aaKnown RBP2.39□□□□□ -2.03
RNU6-239P-201ENST00000390990 ZNF174Q15697 407 aa2.39□□□□□ -2.03
RNU6-239P-201ENST00000390990 LONRF2Q1L5Z9 754 aa2.39□□□□□ -2.03
RNU6-239P-201ENST00000390990 MFSD14BQ5SR56 506 aa2.39□□□□□ -2.03
RNU6-239P-201ENST00000390990 TMCO4Q5TGY1 634 aa2.39□□□□□ -2.03
RNU6-239P-201ENST00000390990 ZNF626Q68DY1 528 aa2.39□□□□□ -2.03
RNU6-239P-201ENST00000390990 TECPR1Q7Z6L1 1165 aa2.39□□□□□ -2.03
RNU6-239P-201ENST00000390990 VGLL2Q8N8G2 317 aa2.39□□□□□ -2.03
RNU6-239P-201ENST00000390990 CHST14Q8NCH0 376 aa2.39□□□□□ -2.03
RNU6-239P-201ENST00000390990 SLC35B2Q8TB61 432 aa2.39□□□□□ -2.03
RNU6-239P-201ENST00000390990 MDM1Q8TC05 714 aa2.39□□□□□ -2.03
RNU6-239P-201ENST00000390990 SARAFQ96BY9 339 aa2.39□□□□□ -2.03
RNU6-239P-201ENST00000390990 RNF31Q96EP0 1072 aa2.39□□□□□ -2.03
RNU6-239P-201ENST00000390990 CDC5LQ99459 802 aaKnown RBP2.39□□□□□ -2.03
RNU6-239P-201ENST00000390990 HEPHQ9BQS7 1158 aa2.39□□□□□ -2.03
RNU6-239P-201ENST00000390990 KRTAP4-4Q9BYR3 166 aa2.39□□□□□ -2.03
RNU6-239P-201ENST00000390990 TRIM55Q9BYV6 548 aa2.39□□□□□ -2.03
RNU6-239P-201ENST00000390990 TRIM39Q9HCM9 518 aa2.39□□□□□ -2.03
RNU6-239P-201ENST00000390990 TMEM74BQ9NUR3 256 aa2.39□□□□□ -2.03
RNU6-239P-201ENST00000390990 KCTD5Q9NXV2 234 aa2.39□□□□□ -2.03
RNU6-239P-201ENST00000390990 USP18Q9UMW8 372 aa2.39□□□□□ -2.03
RNU6-239P-201ENST00000390990 KDM2BQ8NHM5 1336 aa2.39□□□□□ -2.03
RNU6-239P-201ENST00000390990 A0A1B0GTW7 788 aa2.38□□□□□ -2.03
RNU6-239P-201ENST00000390990 CCDC85CA6NKD9 419 aa2.38□□□□□ -2.03
RNU6-239P-201ENST00000390990 PRR35P0CG20 571 aa2.38□□□□□ -2.03
RNU6-239P-201ENST00000390990 WT1P19544 449 aaPredicted RBP2.38□□□□□ -2.03
RNU6-239P-201ENST00000390990 TKTP29401 623 aaKnown RBP2.38□□□□□ -2.03
RNU6-239P-201ENST00000390990 MGAT5Q09328 741 aa2.38□□□□□ -2.03
RNU6-239P-201ENST00000390990 CREB3L3Q68CJ9 461 aa2.38□□□□□ -2.03
RNU6-239P-201ENST00000390990 ZCCHC8Q6NZY4 707 aaKnown RBP2.38□□□□□ -2.03
RNU6-239P-201ENST00000390990 CDYL2Q8N8U2 506 aa2.38□□□□□ -2.03
RNU6-239P-201ENST00000390990 ZFP28Q8NHY6 868 aa2.38□□□□□ -2.03
RNU6-239P-201ENST00000390990 GAB3Q8WWW8 586 aa2.38□□□□□ -2.03
RNU6-239P-201ENST00000390990 PTCD3Q96EY7 689 aaKnown RBP2.38□□□□□ -2.03
RNU6-239P-201ENST00000390990 BOD1Q96IK1 185 aa2.38□□□□□ -2.03
RNU6-239P-201ENST00000390990 GALNT9Q9HCQ5 603 aa2.38□□□□□ -2.03
RNU6-239P-201ENST00000390990 SAMD15Q9P1V8 674 aa2.38□□□□□ -2.03
RNU6-239P-201ENST00000390990 ENTPD2Q9Y5L3 495 aa2.38□□□□□ -2.03
RNU6-239P-201ENST00000390990 PNPLA7Q6ZV29 1317 aa2.38□□□□□ -2.03
RNU6-239P-201ENST00000390990 H3BNC9 293 aa2.37□□□□□ -2.03
RNU6-239P-201ENST00000390990 MOSPD3O75425 235 aa2.37□□□□□ -2.03
RNU6-239P-201ENST00000390990 ITGA10O75578 1167 aa2.37□□□□□ -2.03
RNU6-239P-201ENST00000390990 PFKMP08237 780 aa2.37□□□□□ -2.03
RNU6-239P-201ENST00000390990 ELFN1P0C7U0 828 aa2.37□□□□□ -2.03
RNU6-239P-201ENST00000390990 GPD1P21695 349 aa2.37□□□□□ -2.03
RNU6-239P-201ENST00000390990 FGFR4P22455 802 aa2.37□□□□□ -2.03
RNU6-239P-201ENST00000390990 CCT4P50991 539 aaKnown RBP2.37□□□□□ -2.03
RNU6-239P-201ENST00000390990 MFAP1P55081 439 aaKnown RBP2.37□□□□□ -2.03
RNU6-239P-201ENST00000390990 CYP2A13Q16696 494 aa2.37□□□□□ -2.03
RNU6-239P-201ENST00000390990 ZBTB41Q5SVQ8 909 aa2.37□□□□□ -2.03
RNU6-239P-201ENST00000390990 ATXN7L2Q5T6C5 722 aaPredicted RBP2.37□□□□□ -2.03
RNU6-239P-201ENST00000390990 AWAT2Q6E213 333 aa2.37□□□□□ -2.03
RNU6-239P-201ENST00000390990 ABHD15Q6UXT9 468 aa2.37□□□□□ -2.03
RNU6-239P-201ENST00000390990 MED25Q71SY5 747 aa2.37□□□□□ -2.03
RNU6-239P-201ENST00000390990 AMIGO2Q86SJ2 522 aa2.37□□□□□ -2.03
RNU6-239P-201ENST00000390990 DDX53Q86TM3 631 aaKnown RBP2.37□□□□□ -2.03
RNU6-239P-201ENST00000390990 LNX2Q8N448 690 aa2.37□□□□□ -2.03
RNU6-239P-201ENST00000390990 RPL36ALQ969Q0 106 aaKnown RBP2.37□□□□□ -2.03
RNU6-239P-201ENST00000390990 ARMC5Q96C12 935 aa2.37□□□□□ -2.03
RNU6-239P-201ENST00000390990 GMLQ99445 158 aa2.37□□□□□ -2.03
RNU6-239P-201ENST00000390990 CCDC113Q9H0I3 377 aa2.37□□□□□ -2.03
RNU6-239P-201ENST00000390990 ZMAT4Q9H898 229 aa2.37□□□□□ -2.03
RNU6-239P-201ENST00000390990 UNKLQ9H9P5 680 aaKnown RBP2.37□□□□□ -2.03
RNU6-239P-201ENST00000390990 FLRT1Q9NZU1 646 aa2.37□□□□□ -2.03
RNU6-239P-201ENST00000390990 BTBD3Q9Y2F9 522 aa2.37□□□□□ -2.03
RNU6-239P-201ENST00000390990 SPO11Q9Y5K1 396 aa2.37□□□□□ -2.03
RNU6-239P-201ENST00000390990 AATKQ6ZMQ8 1374 aa2.36□□□□□ -2.03
RNU6-239P-201ENST00000390990 CACNA1IQ9P0X4 2223 aa2.36□□□□□ -2.03
RNU6-239P-201ENST00000390990 FAM221BA6H8Z2 402 aa2.36□□□□□ -2.03
RNU6-239P-201ENST00000390990 PRR23D1E9PI22 279 aaPredicted RBP2.36□□□□□ -2.03
RNU6-239P-201ENST00000390990 WNT10BO00744 389 aa2.36□□□□□ -2.03
RNU6-239P-201ENST00000390990 PRR23D2P0DMB1 279 aaPredicted RBP2.36□□□□□ -2.03
RNU6-239P-201ENST00000390990 KELP23276 732 aa2.36□□□□□ -2.03
RNU6-239P-201ENST00000390990 FOLR3P41439 243 aa2.36□□□□□ -2.03
RNU6-239P-201ENST00000390990 TUBA4AP68366 448 aa2.36□□□□□ -2.03
RNU6-239P-201ENST00000390990 TFF2Q03403 129 aa2.36□□□□□ -2.03
RNU6-239P-201ENST00000390990 PRAMEF14Q5SWL7 426 aa2.36□□□□□ -2.03
RNU6-239P-201ENST00000390990 TSTD2Q5T7W7 516 aa2.36□□□□□ -2.03
RNU6-239P-201ENST00000390990 KIAA0895LQ68EN5 471 aa2.36□□□□□ -2.03
RNU6-239P-201ENST00000390990 FCRLBQ6BAA4 426 aa2.36□□□□□ -2.03
RNU6-239P-201ENST00000390990 LMBR1LQ6UX01 489 aa2.36□□□□□ -2.03
RNU6-239P-201ENST00000390990 ZNF782Q6ZMW2 699 aaPredicted RBP2.36□□□□□ -2.03
RNU6-239P-201ENST00000390990 FAM43AQ8N2R8 423 aa2.36□□□□□ -2.03
RNU6-239P-201ENST00000390990 ZNF496Q96IT1 587 aaPredicted RBP2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms