RNA–Protein interactions for RNA: ENST00000390468.1

TRAV41-201, Transcript of T cell receptor alpha variable 41, humanhuman

APPRIS P1 BASIC

Gene TRAV41, Length 336 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41-201ENST00000390468 STYK1Q6J9G0 422 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 TLDC1Q6P9B6 456 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 CYB5D1Q6P9G0 228 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 BLOC1S2Q6QNY1 142 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 DPP8Q6V1X1 898 aaPredicted RBP2.86□□□□□ -1.95
TRAV41-201ENST00000390468 PRR23BQ6ZRT6 265 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 LCNL1Q6ZST4 164 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 SYDE1Q6ZW31 735 aaPredicted RBP2.86□□□□□ -1.95
TRAV41-201ENST00000390468 BZW1Q7L1Q6 419 aaKnown RBP2.86□□□□□ -1.95
TRAV41-201ENST00000390468 CDC37L1Q7L3B6 337 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 NANOGNBQ7Z5D8 188 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 WDR75Q8IWA0 830 aaKnown RBP2.86□□□□□ -1.95
TRAV41-201ENST00000390468 SP8Q8IXZ3 490 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 MYO1HQ8N1T3 1032 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 ARHGAP18Q8N392 663 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 PAF1Q8N7H5 531 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 ZBTB8BQ8NAP8 495 aaPredicted RBP2.86□□□□□ -1.95
TRAV41-201ENST00000390468 SMC1BQ8NDV3 1235 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 RASSF8Q8NHQ8 419 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 CCDC110Q8TBZ0 833 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 BCAS4Q8TDM0 211 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 MAIP1Q8WWC4 291 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 USP6NLQ92738 828 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 MAP4K1Q92918 833 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 ATP6V0A1Q93050 837 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 GFM2Q969S9 779 aaKnown RBP2.86□□□□□ -1.95
TRAV41-201ENST00000390468 NACC2Q96BF6 587 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 INTS4Q96HW7 963 aaKnown RBP2.86□□□□□ -1.95
TRAV41-201ENST00000390468 EPSTI1Q96J88 318 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 MAML3Q96JK9 1138 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 FAM84BQ96KN1 310 aaPredicted RBP2.86□□□□□ -1.95
TRAV41-201ENST00000390468 SPATA32Q96LK8 384 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 GPR101Q96P66 508 aaPredicted RBP2.86□□□□□ -1.95
TRAV41-201ENST00000390468 FANCD2OSQ96PS1 177 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 TRAPPC9Q96Q05 1148 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 SMC6Q96SB8 1091 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 DIRC2Q96SL1 478 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 DUSP9Q99956 384 aaKnown RBP2.86□□□□□ -1.95
TRAV41-201ENST00000390468 SLC39A3Q9BRY0 314 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 CAPS2Q9BXY5 557 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 NIF3L1Q9GZT8 377 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 PUS7LQ9H0K6 701 aaKnown RBP2.86□□□□□ -1.95
TRAV41-201ENST00000390468 NUP62CLQ9H1M0 184 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 PARVBQ9HBI1 364 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 PCDH18Q9HCL0 1135 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 PDE11AQ9HCR9 933 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 NPHS2Q9NP85 383 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 SLC39A2Q9NP94 309 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 PIH1D3Q9NQM4 214 aaKnown RBP2.86□□□□□ -1.95
TRAV41-201ENST00000390468 TBC1D7Q9P0N9 293 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 VTI1BQ9UEU0 232 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 DDX25Q9UHL0 483 aaKnown RBP2.86□□□□□ -1.95
TRAV41-201ENST00000390468 GGA2Q9UJY4 613 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 WDR3Q9UNX4 943 aaKnown RBP eCLIP2.86□□□□□ -1.95
TRAV41-201ENST00000390468 PLAGL2Q9UPG8 496 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 PRELID1Q9Y255 219 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 N6AMT1Q9Y5N5 214 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 SNX14Q9Y5W7 946 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 CYP46A1Q9Y6A2 500 aa2.86□□□□□ -1.95
TRAV41-201ENST00000390468 PDS5AQ29RF7 1337 aaKnown RBP2.86□□□□□ -1.95
TRAV41-201ENST00000390468 MCM3APO60318 1980 aa2.85□□□□□ -1.95
TRAV41-201ENST00000390468 TCRBV5S4A2TA0A5A2 114 aa2.85□□□□□ -1.95
TRAV41-201ENST00000390468 CCDC162PA2VCL2 907 aa2.85□□□□□ -1.95
TRAV41-201ENST00000390468 KLRG2A4D1S0 409 aaPredicted RBP2.85□□□□□ -1.95
TRAV41-201ENST00000390468 CCDC69A6NI79 296 aa2.85□□□□□ -1.95
TRAV41-201ENST00000390468 TRIM64CA6NLI5 447 aa2.85□□□□□ -1.95
TRAV41-201ENST00000390468 TMEM110-MUSTN1A8MSY1 372 aa2.85□□□□□ -1.95
TRAV41-201ENST00000390468 B8ZZF3 427 aa2.85□□□□□ -1.95
TRAV41-201ENST00000390468 ANKRD65E5RJM6 399 aa2.85□□□□□ -1.95
TRAV41-201ENST00000390468 H3BQF6 201 aa2.85□□□□□ -1.95
TRAV41-201ENST00000390468 MYO1FO00160 1098 aa2.85□□□□□ -1.95
TRAV41-201ENST00000390468 ZNF213O14771 459 aa2.85□□□□□ -1.95
TRAV41-201ENST00000390468 SLC27A2O14975 620 aa2.85□□□□□ -1.95
TRAV41-201ENST00000390468 LSM1O15116 133 aaKnown RBP2.85□□□□□ -1.95
TRAV41-201ENST00000390468 GPR182O15218 404 aa2.85□□□□□ -1.95
TRAV41-201ENST00000390468 EIF3HO15372 352 aaKnown RBP eCLIP2.85□□□□□ -1.95
TRAV41-201ENST00000390468 TTI1O43156 1089 aa2.85□□□□□ -1.95
TRAV41-201ENST00000390468 ZNF862O60290 1169 aa2.85□□□□□ -1.95
TRAV41-201ENST00000390468 ZEB2O60315 1214 aa2.85□□□□□ -1.95
TRAV41-201ENST00000390468 DIAPH2O60879 1101 aa2.85□□□□□ -1.95
TRAV41-201ENST00000390468 SHOX2O60902 331 aaPredicted RBP2.85□□□□□ -1.95
TRAV41-201ENST00000390468 MBD4O95243 580 aa2.85□□□□□ -1.95
TRAV41-201ENST00000390468 ZBTB7AO95365 584 aa2.85□□□□□ -1.95
TRAV41-201ENST00000390468 CHGBP05060 677 aa2.85□□□□□ -1.95
TRAV41-201ENST00000390468 CYP21A2P08686 494 aa2.85□□□□□ -1.95
TRAV41-201ENST00000390468 GSTA2P09210 222 aa2.85□□□□□ -1.95
TRAV41-201ENST00000390468 ZSCAN22P10073 491 aaPredicted RBP2.85□□□□□ -1.95
TRAV41-201ENST00000390468 RPL17P18621 184 aaKnown RBP2.85□□□□□ -1.95
TRAV41-201ENST00000390468 SYT1P21579 422 aa2.85□□□□□ -1.95
TRAV41-201ENST00000390468 IBSPP21815 317 aaPredicted RBP2.85□□□□□ -1.95
TRAV41-201ENST00000390468 CYP7A1P22680 504 aa2.85□□□□□ -1.95
TRAV41-201ENST00000390468 S100A1P23297 94 aa2.85□□□□□ -1.95
TRAV41-201ENST00000390468 SMARCA1P28370 1054 aa2.85□□□□□ -1.95
TRAV41-201ENST00000390468 CHRNA5P30532 468 aa2.85□□□□□ -1.95
TRAV41-201ENST00000390468 AARSP49588 968 aaKnown RBP eCLIP2.85□□□□□ -1.95
TRAV41-201ENST00000390468 SCNN1BP51168 640 aa2.85□□□□□ -1.95
TRAV41-201ENST00000390468 CSE1LP55060 971 aaKnown RBP2.85□□□□□ -1.95
TRAV41-201ENST00000390468 OXCT1P55809 520 aa2.85□□□□□ -1.95
TRAV41-201ENST00000390468 HAND2P61296 217 aa2.85□□□□□ -1.95
TRAV41-201ENST00000390468 ETF1P62495 437 aaKnown RBP2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms