RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 ROPN1BQ9BZX4 212 aaPredicted RBP15.15■□□□□ 0.02
RTF1-201ENST00000389629 ROPN1Q9HAT0 212 aaPredicted RBP15.15■□□□□ 0.02
RTF1-201ENST00000389629 KLHL11Q9NVR0 708 aa15.15■□□□□ 0.02
RTF1-201ENST00000389629 AKAP3O75969 853 aa15.15■□□□□ 0.02
RTF1-201ENST00000389629 SSTR3P32745 418 aaPredicted RBP15.15■□□□□ 0.02
RTF1-201ENST00000389629 BRDTQ58F21 947 aaPredicted RBP15.15■□□□□ 0.02
RTF1-201ENST00000389629 MRPL47Q9HD33 250 aaKnown RBP15.15■□□□□ 0.02
RTF1-201ENST00000389629 ANKFY1Q9P2R3 1169 aa15.15■□□□□ 0.02
RTF1-201ENST00000389629 CCPG1Q9ULG6 757 aa15.15■□□□□ 0.02
RTF1-201ENST00000389629 RTN2O75298 545 aa15.15■□□□□ 0.02
RTF1-201ENST00000389629 SHBGP04278 402 aa15.15■□□□□ 0.02
RTF1-201ENST00000389629 FECHP22830 423 aa15.15■□□□□ 0.02
RTF1-201ENST00000389629 ITPK1Q13572 414 aa15.15■□□□□ 0.02
RTF1-201ENST00000389629 FAM196AQ6ZSG2 479 aa15.15■□□□□ 0.02
RTF1-201ENST00000389629 CRLF3Q8IUI8 442 aa15.15■□□□□ 0.02
RTF1-201ENST00000389629 DBNDD1Q9H9R9 158 aa15.15■□□□□ 0.02
RTF1-201ENST00000389629 MARCOQ9UEW3 520 aaPredicted RBP15.15■□□□□ 0.02
RTF1-201ENST00000389629 NARFQ9UHQ1 456 aa15.15■□□□□ 0.02
RTF1-201ENST00000389629 IQANK1A0A1B0GTG1 560 aa15.14■□□□□ 0.01
RTF1-201ENST00000389629 STAT2P52630 851 aa15.14■□□□□ 0.01
RTF1-201ENST00000389629 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.14■□□□□ 0.01
RTF1-201ENST00000389629 TRIM42Q8IWZ5 723 aa15.14■□□□□ 0.01
RTF1-201ENST00000389629 CD302Q8IX05 232 aa15.14■□□□□ 0.01
RTF1-201ENST00000389629 SH2D3AQ9BRG2 576 aa15.14■□□□□ 0.01
RTF1-201ENST00000389629 SALL4Q9UJQ4 1053 aa15.14■□□□□ 0.01
RTF1-201ENST00000389629 ATRNO75882 1429 aa15.14■□□□□ 0.01
RTF1-201ENST00000389629 PRELPP51888 382 aa15.14■□□□□ 0.01
RTF1-201ENST00000389629 THOC5Q13769 683 aaKnown RBP15.14■□□□□ 0.01
RTF1-201ENST00000389629 BZW1Q7L1Q6 419 aaKnown RBP15.14■□□□□ 0.01
RTF1-201ENST00000389629 C4orf32Q8N8J7 132 aa15.14■□□□□ 0.01
RTF1-201ENST00000389629 NLRP7Q8WX94 980 aa15.14■□□□□ 0.01
RTF1-201ENST00000389629 SLC13A1Q9BZW2 595 aa15.14■□□□□ 0.01
RTF1-201ENST00000389629 PHTF1Q9UMS5 762 aa15.14■□□□□ 0.01
RTF1-201ENST00000389629 SLC16A4O15374 487 aa15.14■□□□□ 0.01
RTF1-201ENST00000389629 LPXNO60711 386 aa15.14■□□□□ 0.01
RTF1-201ENST00000389629 KRT81Q14533 505 aa15.14■□□□□ 0.01
RTF1-201ENST00000389629 DEPTORQ8TB45 409 aa15.14■□□□□ 0.01
RTF1-201ENST00000389629 LRGUKQ96M69 825 aa15.14■□□□□ 0.01
RTF1-201ENST00000389629 CSRNP1Q96S65 589 aa15.14■□□□□ 0.01
RTF1-201ENST00000389629 THTPAQ9BU02 230 aa15.14■□□□□ 0.01
RTF1-201ENST00000389629 THEGQ9P2T0 379 aa15.14■□□□□ 0.01
RTF1-201ENST00000389629 PI4KBQ9UBF8 816 aa15.14■□□□□ 0.01
RTF1-201ENST00000389629 TRAF3IP3Q9Y228 551 aa15.14■□□□□ 0.01
RTF1-201ENST00000389629 ARHGAP23Q9P227 1491 aa15.14■□□□□ 0.01
RTF1-201ENST00000389629 PI4K2BG5E9Z4 385 aa15.14■□□□□ 0.01
RTF1-201ENST00000389629 DRD4P21917 467 aa15.14■□□□□ 0.01
RTF1-201ENST00000389629 HNRNPH3P31942 346 aaKnown RBP15.14■□□□□ 0.01
RTF1-201ENST00000389629 KRT80Q6KB66 452 aa15.14■□□□□ 0.01
RTF1-201ENST00000389629 PARD3BQ8TEW8 1205 aa15.14■□□□□ 0.01
RTF1-201ENST00000389629 ATG4AQ8WYN0 398 aa15.14■□□□□ 0.01
RTF1-201ENST00000389629 OSBPL7Q9BZF2 842 aa15.14■□□□□ 0.01
RTF1-201ENST00000389629 ADAM22Q9P0K1 906 aa15.14■□□□□ 0.01
RTF1-201ENST00000389629 TRIM33Q9UPN9 1127 aa15.14■□□□□ 0.01
RTF1-201ENST00000389629 ITIH2P19823 946 aa15.13■□□□□ 0.01
RTF1-201ENST00000389629 COILP38432 576 aaPredicted RBP15.13■□□□□ 0.01
RTF1-201ENST00000389629 CCNHP51946 323 aaPredicted RBP15.13■□□□□ 0.01
RTF1-201ENST00000389629 LRRC55Q6ZSA7 311 aa15.13■□□□□ 0.01
RTF1-201ENST00000389629 MREGQ8N565 214 aa15.13■□□□□ 0.01
RTF1-201ENST00000389629 BTBD6Q96KE9 485 aa15.13■□□□□ 0.01
RTF1-201ENST00000389629 OLFM3Q96PB7 478 aa15.13■□□□□ 0.01
RTF1-201ENST00000389629 CDC42EP4Q9H3Q1 356 aaKnown RBP15.13■□□□□ 0.01
RTF1-201ENST00000389629 UPP2O95045 317 aa15.13■□□□□ 0.01
RTF1-201ENST00000389629 SERPINB2P05120 415 aa15.13■□□□□ 0.01
RTF1-201ENST00000389629 CD58P19256 250 aa15.13■□□□□ 0.01
RTF1-201ENST00000389629 SERPINB3P29508 390 aa15.13■□□□□ 0.01
RTF1-201ENST00000389629 GPSM2P81274 684 aa15.13■□□□□ 0.01
RTF1-201ENST00000389629 P3H1Q32P28 736 aa15.13■□□□□ 0.01
RTF1-201ENST00000389629 ATL2Q8NHH9 583 aa15.13■□□□□ 0.01
RTF1-201ENST00000389629 DCAF4Q8WV16 495 aa15.13■□□□□ 0.01
RTF1-201ENST00000389629 RXFP1Q9HBX9 757 aa15.13■□□□□ 0.01
RTF1-201ENST00000389629 FMN2Q9NZ56 1722 aa15.13■□□□□ 0.01
RTF1-201ENST00000389629 F5H6K3 240 aa15.13■□□□□ 0.01
RTF1-201ENST00000389629 DKC1O60832 514 aaKnown RBP eCLIP15.13■□□□□ 0.01
RTF1-201ENST00000389629 BBOX1O75936 387 aa15.13■□□□□ 0.01
RTF1-201ENST00000389629 KLRC3Q07444 240 aa15.13■□□□□ 0.01
RTF1-201ENST00000389629 SYCP2LQ5T4T6 812 aa15.13■□□□□ 0.01
RTF1-201ENST00000389629 HIC2Q96JB3 615 aa15.13■□□□□ 0.01
RTF1-201ENST00000389629 TSPYL2Q9H2G4 693 aaPredicted RBP15.13■□□□□ 0.01
RTF1-201ENST00000389629 ZWILCHQ9H900 591 aa15.13■□□□□ 0.01
RTF1-201ENST00000389629 B2RBV5 119 aa15.12■□□□□ 0.01
RTF1-201ENST00000389629 GH2P01242 217 aa15.12■□□□□ 0.01
RTF1-201ENST00000389629 ARSEP51690 589 aa15.12■□□□□ 0.01
RTF1-201ENST00000389629 ARL4CP56559 192 aa15.12■□□□□ 0.01
RTF1-201ENST00000389629 ATG16L1Q676U5 607 aa15.12■□□□□ 0.01
RTF1-201ENST00000389629 DNAJC24Q6P3W2 148 aa15.12■□□□□ 0.01
RTF1-201ENST00000389629 SNRNP27Q8WVK2 155 aaKnown RBP15.12■□□□□ 0.01
RTF1-201ENST00000389629 TRIM56Q9BRZ2 755 aaKnown RBP15.12■□□□□ 0.01
RTF1-201ENST00000389629 LRRIQ4A6NIV6 560 aa15.12■□□□□ 0.01
RTF1-201ENST00000389629 FOXN3O00409 490 aaPredicted RBP15.12■□□□□ 0.01
RTF1-201ENST00000389629 RNF8O76064 485 aa15.12■□□□□ 0.01
RTF1-201ENST00000389629 RARGP13631 454 aa15.12■□□□□ 0.01
RTF1-201ENST00000389629 ERMARDQ5T6L9 678 aa15.12■□□□□ 0.01
RTF1-201ENST00000389629 INTS5Q6P9B9 1019 aaKnown RBP15.12■□□□□ 0.01
RTF1-201ENST00000389629 LVRNQ6Q4G3 990 aa15.12■□□□□ 0.01
RTF1-201ENST00000389629 C3orf67Q6ZVT6 689 aa15.12■□□□□ 0.01
RTF1-201ENST00000389629 PPM1NQ8N819 430 aa15.12■□□□□ 0.01
RTF1-201ENST00000389629 INPP4AQ96PE3 977 aaPredicted RBP15.12■□□□□ 0.01
RTF1-201ENST00000389629 SEL1LQ9UBV2 794 aa15.12■□□□□ 0.01
RTF1-201ENST00000389629 PNMA3Q9UL41 463 aa15.12■□□□□ 0.01
RTF1-201ENST00000389629 GRIN2DO15399 1336 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 243.1 ms