RNA–Protein interactions for RNA: ENST00000388835.3

KRT18-201, Transcript of keratin 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT18, Length 1,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-201ENST00000388835 WDFY4Q6ZS81 3184 aa28.2■■■□□ 2.11
KRT18-201ENST00000388835 CASTOR2A6NHX0 329 aa28.2■■■□□ 2.1
KRT18-201ENST00000388835 GLUD1P00367 558 aa28.2■■■□□ 2.1
KRT18-201ENST00000388835 SPATA31D3P0C874 917 aa28.2■■■□□ 2.1
KRT18-201ENST00000388835 KRT79Q5XKE5 535 aa28.2■■■□□ 2.1
KRT18-201ENST00000388835 SPATA31D4Q6ZUB0 917 aa28.2■■■□□ 2.1
KRT18-201ENST00000388835 PALB2Q86YC2 1186 aa28.2■■■□□ 2.1
KRT18-201ENST00000388835 FBXL6Q8N531 539 aa28.2■■■□□ 2.1
KRT18-201ENST00000388835 TMX3Q96JJ7 454 aa28.2■■■□□ 2.1
KRT18-201ENST00000388835 CHST7Q9NS84 486 aa28.2■■■□□ 2.1
KRT18-201ENST00000388835 GDAQ9Y2T3 454 aa28.2■■■□□ 2.1
KRT18-201ENST00000388835 PTGESO14684 152 aa28.19■■■□□ 2.1
KRT18-201ENST00000388835 TUSC3Q13454 348 aa28.19■■■□□ 2.1
KRT18-201ENST00000388835 HSP90AA2PQ14568 343 aaPredicted RBP28.19■■■□□ 2.1
KRT18-201ENST00000388835 USP41Q3LFD5 358 aa28.19■■■□□ 2.1
KRT18-201ENST00000388835 DTHD1Q6ZMT9 781 aa28.19■■■□□ 2.1
KRT18-201ENST00000388835 CCDC149Q6ZUS6 474 aa28.19■■■□□ 2.1
KRT18-201ENST00000388835 RIN2Q8WYP3 895 aaPredicted RBP28.19■■■□□ 2.1
KRT18-201ENST00000388835 KCNH6Q9H252 994 aa28.19■■■□□ 2.1
KRT18-201ENST00000388835 SMOC2Q9H3U7 446 aa28.19■■■□□ 2.1
KRT18-201ENST00000388835 EIF4ENIF1Q9NRA8 985 aaKnown RBP28.19■■■□□ 2.1
KRT18-201ENST00000388835 SORCS3Q9UPU3 1222 aa28.19■■■□□ 2.1
KRT18-201ENST00000388835 DNM3Q9UQ16 869 aa28.19■■■□□ 2.1
KRT18-201ENST00000388835 LAD1O00515 517 aa28.18■■■□□ 2.1
KRT18-201ENST00000388835 CD2BP2O95400 341 aaKnown RBP28.18■■■□□ 2.1
KRT18-201ENST00000388835 BRD1O95696 1058 aa28.18■■■□□ 2.1
KRT18-201ENST00000388835 EFNA5P52803 228 aa28.18■■■□□ 2.1
KRT18-201ENST00000388835 MTMR3Q13615 1198 aa28.18■■■□□ 2.1
KRT18-201ENST00000388835 ZDHHC14Q8IZN3 488 aa28.18■■■□□ 2.1
KRT18-201ENST00000388835 CCDC169A6NNP5 214 aa28.17■■■□□ 2.1
KRT18-201ENST00000388835 THP07101 528 aa28.17■■■□□ 2.1
KRT18-201ENST00000388835 RPL17P18621 184 aaKnown RBP28.17■■■□□ 2.1
KRT18-201ENST00000388835 ZRSR1Q15695 479 aaKnown RBP28.17■■■□□ 2.1
KRT18-201ENST00000388835 IER5LQ5T953 404 aa28.17■■■□□ 2.1
KRT18-201ENST00000388835 NT5DC1Q5TFE4 455 aa28.17■■■□□ 2.1
KRT18-201ENST00000388835 PLCD3Q8N3E9 789 aa28.17■■■□□ 2.1
KRT18-201ENST00000388835 USTQ9Y2C2 406 aa28.17■■■□□ 2.1
KRT18-201ENST00000388835 ZDBF2Q9HCK1 2354 aa28.17■■■□□ 2.1
KRT18-201ENST00000388835 CCDC195A0A1B0GUA6 201 aa28.16■■■□□ 2.1
KRT18-201ENST00000388835 K7ERI5 159 aa28.16■■■□□ 2.1
KRT18-201ENST00000388835 GJB2P29033 226 aa28.16■■■□□ 2.1
KRT18-201ENST00000388835 PRPHP41219 470 aa28.16■■■□□ 2.1
KRT18-201ENST00000388835 PEX3P56589 373 aa28.16■■■□□ 2.1
KRT18-201ENST00000388835 NHLH1Q02575 133 aa28.16■■■□□ 2.1
KRT18-201ENST00000388835 ATF7IP2Q5U623 682 aa28.16■■■□□ 2.1
KRT18-201ENST00000388835 ACSF2Q96CM8 615 aaPredicted RBP28.16■■■□□ 2.1
KRT18-201ENST00000388835 UPF2Q9HAU5 1272 aaKnown RBP28.16■■■□□ 2.1
KRT18-201ENST00000388835 TRIP11Q15643 1979 aa28.16■■■□□ 2.1
KRT18-201ENST00000388835 KMT2EQ8IZD2 1858 aa28.16■■■□□ 2.1
KRT18-201ENST00000388835 H3BQV1 296 aa28.16■■■□□ 2.1
KRT18-201ENST00000388835 HIP1RO75146 1068 aa28.16■■■□□ 2.1
KRT18-201ENST00000388835 RFPL2O75678 378 aa28.16■■■□□ 2.1
KRT18-201ENST00000388835 PDGFBP01127 241 aaPredicted RBP28.16■■■□□ 2.1
KRT18-201ENST00000388835 DCAF4L1Q3SXM0 396 aa28.16■■■□□ 2.1
KRT18-201ENST00000388835 ELMSAN1Q6PJG2 1045 aa28.16■■■□□ 2.1
KRT18-201ENST00000388835 PRSS55Q6UWB4 352 aaPredicted RBP28.16■■■□□ 2.1
KRT18-201ENST00000388835 C15orf39Q6ZRI6 1047 aa28.16■■■□□ 2.1
KRT18-201ENST00000388835 KCNK18Q7Z418 384 aa28.16■■■□□ 2.1
KRT18-201ENST00000388835 MMTAG2Q9BU76 263 aaKnown RBP28.16■■■□□ 2.1
KRT18-201ENST00000388835 RUSC1Q9BVN2 902 aa28.16■■■□□ 2.1
KRT18-201ENST00000388835 MTCL1Q9Y4B5 1905 aaKnown RBP28.15■■■□□ 2.1
KRT18-201ENST00000388835 SF3B1O75533 1304 aaKnown RBP eCLIP28.15■■■□□ 2.17e-7■■■■■ 29.5
KRT18-201ENST00000388835 KIF4AO95239 1232 aa28.15■■■□□ 2.1
KRT18-201ENST00000388835 RILPL1Q5EBL4 403 aa28.15■■■□□ 2.1
KRT18-201ENST00000388835 CEP57Q86XR8 500 aa28.15■■■□□ 2.1
KRT18-201ENST00000388835 UBALD2Q8IYN6 164 aa28.15■■■□□ 2.1
KRT18-201ENST00000388835 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP28.15■■■□□ 2.1
KRT18-201ENST00000388835 DPP7Q9UHL4 492 aa28.15■■■□□ 2.1
KRT18-201ENST00000388835 NPTX2P47972 431 aa28.14■■■□□ 2.1
KRT18-201ENST00000388835 VCPP55072 806 aaKnown RBP28.14■■■□□ 2.1
KRT18-201ENST00000388835 GLRA4Q5JXX5 417 aa28.14■■■□□ 2.1
KRT18-201ENST00000388835 RTP2Q5QGT7 225 aa28.14■■■□□ 2.1
KRT18-201ENST00000388835 OTOP3Q7RTS5 596 aa28.14■■■□□ 2.1
KRT18-201ENST00000388835 ALYREFQ86V81 257 aaKnown RBP28.14■■■□□ 2.1
KRT18-201ENST00000388835 DAW1Q8N136 415 aa28.14■■■□□ 2.1
KRT18-201ENST00000388835 CMASQ8NFW8 434 aaPredicted RBP28.14■■■□□ 2.1
KRT18-201ENST00000388835 TGM5O43548 720 aa28.13■■■□□ 2.09
KRT18-201ENST00000388835 NAB2Q15742 525 aa28.13■■■□□ 2.09
KRT18-201ENST00000388835 FAM171A1Q5VUB5 890 aa28.13■■■□□ 2.09
KRT18-201ENST00000388835 PRSS33Q8NF86 280 aa28.13■■■□□ 2.09
KRT18-201ENST00000388835 PLIN2Q99541 437 aa28.13■■■□□ 2.09
KRT18-201ENST00000388835 FNIP2Q9P278 1114 aa28.13■■■□□ 2.09
KRT18-201ENST00000388835 ATP2C1P98194 919 aaPredicted RBP28.12■■■□□ 2.09
KRT18-201ENST00000388835 DMP1Q13316 513 aaPredicted RBP28.12■■■□□ 2.09
KRT18-201ENST00000388835 RINT1Q6NUQ1 792 aa28.12■■■□□ 2.09
KRT18-201ENST00000388835 SMG7Q92540 1137 aaKnown RBP28.12■■■□□ 2.09
KRT18-201ENST00000388835 C1orf186Q6ZWK4 172 aa28.11■■■□□ 2.09
KRT18-201ENST00000388835 TTPALQ9BTX7 342 aa28.11■■■□□ 2.09
KRT18-201ENST00000388835 KMT5AQ9NQR1 393 aa28.11■■■□□ 2.09
KRT18-201ENST00000388835 TNFSF13BQ9Y275 285 aa28.11■■■□□ 2.09
KRT18-201ENST00000388835 PHLPP2Q6ZVD8 1323 aa28.11■■■□□ 2.09
KRT18-201ENST00000388835 VWA3AA6NCI4 1184 aa28.11■■■□□ 2.09
KRT18-201ENST00000388835 SFI1A8K8P3 1242 aa28.11■■■□□ 2.09
KRT18-201ENST00000388835 CREMQ03060 361 aa28.11■■■□□ 2.09
KRT18-201ENST00000388835 RAD51AP2Q09MP3 1159 aa28.11■■■□□ 2.09
KRT18-201ENST00000388835 APBB1IPQ7Z5R6 666 aaPredicted RBP28.11■■■□□ 2.09
KRT18-201ENST00000388835 GPR65Q8IYL9 337 aa28.11■■■□□ 2.09
KRT18-201ENST00000388835 DRC1Q96MC2 740 aa28.11■■■□□ 2.09
KRT18-201ENST00000388835 PLEKHA4Q9H4M7 779 aa28.11■■■□□ 2.09
KRT18-201ENST00000388835 PIDD1Q9HB75 910 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms