RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 DEPTORQ8TB45 409 aa29.18■■■□□ 2.26
NPHP3-202ENST00000383282 B3GALT6Q96L58 329 aa29.18■■■□□ 2.26
NPHP3-202ENST00000383282 PIDD1Q9HB75 910 aa29.18■■■□□ 2.26
NPHP3-202ENST00000383282 DUSP12Q9UNI6 340 aa29.18■■■□□ 2.26
NPHP3-202ENST00000383282 CLUHO75153 1309 aa29.18■■■□□ 2.26
NPHP3-202ENST00000383282 RFPL2O75678 378 aa29.17■■■□□ 2.26
NPHP3-202ENST00000383282 PRKCBP05771 671 aa29.17■■■□□ 2.26
NPHP3-202ENST00000383282 CYP11B2P19099 503 aa29.17■■■□□ 2.26
NPHP3-202ENST00000383282 NAMPTP43490 491 aa29.17■■■□□ 2.26
NPHP3-202ENST00000383282 PPP2R5AQ15172 486 aa29.17■■■□□ 2.26
NPHP3-202ENST00000383282 GLYCTKQ8IVS8 523 aa29.17■■■□□ 2.26
NPHP3-202ENST00000383282 PDZD7Q9H5P4 517 aa29.17■■■□□ 2.26
NPHP3-202ENST00000383282 ZDHHC7Q9NXF8 308 aa29.17■■■□□ 2.26
NPHP3-202ENST00000383282 FBXL21Q9UKT6 434 aa29.17■■■□□ 2.26
NPHP3-202ENST00000383282 TGM5O43548 720 aa29.16■■■□□ 2.26
NPHP3-202ENST00000383282 SPATA31D3P0C874 917 aa29.16■■■□□ 2.26
NPHP3-202ENST00000383282 LIG1P18858 919 aa29.16■■■□□ 2.26
NPHP3-202ENST00000383282 RBM25P49756 843 aaKnown RBP29.16■■■□□ 2.26
NPHP3-202ENST00000383282 CLCN5P51795 746 aa29.16■■■□□ 2.26
NPHP3-202ENST00000383282 HMGN5P82970 282 aaKnown RBP29.16■■■□□ 2.26
NPHP3-202ENST00000383282 TTC38Q5R3I4 469 aa29.16■■■□□ 2.26
NPHP3-202ENST00000383282 SPATA31D4Q6ZUB0 917 aa29.16■■■□□ 2.26
NPHP3-202ENST00000383282 FAM184AQ8NB25 1140 aa29.16■■■□□ 2.26
NPHP3-202ENST00000383282 FLCNQ8NFG4 579 aa29.16■■■□□ 2.26
NPHP3-202ENST00000383282 RABGGTAQ92696 567 aa29.16■■■□□ 2.26
NPHP3-202ENST00000383282 SNTG2Q9NY99 539 aa29.16■■■□□ 2.26
NPHP3-202ENST00000383282 DAXXQ9UER7 740 aaPredicted RBP29.16■■■□□ 2.26
NPHP3-202ENST00000383282 NOL7Q9UMY1 257 aaKnown RBP29.16■■■□□ 2.26
NPHP3-202ENST00000383282 CASTOR2A6NHX0 329 aa29.15■■■□□ 2.26
NPHP3-202ENST00000383282 ACKR2O00590 384 aa29.15■■■□□ 2.26
NPHP3-202ENST00000383282 THP07101 528 aa29.15■■■□□ 2.26
NPHP3-202ENST00000383282 BSNDQ8WZ55 320 aa29.15■■■□□ 2.26
NPHP3-202ENST00000383282 IFT74Q96LB3 600 aa29.15■■■□□ 2.26
NPHP3-202ENST00000383282 ST18O60284 1047 aa29.14■■■□□ 2.26
NPHP3-202ENST00000383282 TRAPPC10P48553 1259 aa29.14■■■□□ 2.26
NPHP3-202ENST00000383282 FBXO18Q8NFZ0 1043 aa29.14■■■□□ 2.26
NPHP3-202ENST00000383282 ZNF707Q96C28 371 aaPredicted RBP29.14■■■□□ 2.26
NPHP3-202ENST00000383282 ZSCAN31Q96LW9 406 aaPredicted RBP29.14■■■□□ 2.26
NPHP3-202ENST00000383282 NT5C3AQ9H0P0 336 aa29.14■■■□□ 2.26
NPHP3-202ENST00000383282 GFRA3O60609 400 aa29.13■■■□□ 2.25
NPHP3-202ENST00000383282 N4BP1O75113 896 aaKnown RBP29.13■■■□□ 2.25
NPHP3-202ENST00000383282 RECQL4O94761 1208 aa29.13■■■□□ 2.25
NPHP3-202ENST00000383282 SEC24BO95487 1268 aa29.13■■■□□ 2.25
NPHP3-202ENST00000383282 RPL17P18621 184 aaKnown RBP29.13■■■□□ 2.25
NPHP3-202ENST00000383282 CCT6AP40227 531 aaKnown RBP29.13■■■□□ 2.25
NPHP3-202ENST00000383282 DCAF4L1Q3SXM0 396 aa29.13■■■□□ 2.25
NPHP3-202ENST00000383282 NOSTRINQ8IVI9 506 aa29.13■■■□□ 2.25
NPHP3-202ENST00000383282 HASPINQ8TF76 798 aa29.13■■■□□ 2.25
NPHP3-202ENST00000383282 PAAF1Q9BRP4 392 aa29.13■■■□□ 2.25
NPHP3-202ENST00000383282 TTPALQ9BTX7 342 aa29.13■■■□□ 2.25
NPHP3-202ENST00000383282 EPS15L1Q9UBC2 864 aa29.13■■■□□ 2.25
NPHP3-202ENST00000383282 CACNG4Q9UBN1 327 aa29.13■■■□□ 2.25
NPHP3-202ENST00000383282 C2orf16Q68DN1 1984 aa29.13■■■□□ 2.25
NPHP3-202ENST00000383282 TTLL13PA6NNM8 815 aa29.12■■■□□ 2.25
NPHP3-202ENST00000383282 PAPLNO95428 1278 aa29.12■■■□□ 2.25
NPHP3-202ENST00000383282 EFNA5P52803 228 aa29.12■■■□□ 2.25
NPHP3-202ENST00000383282 ELAVL2Q12926 359 aaKnown RBP29.12■■■□□ 2.25
NPHP3-202ENST00000383282 RTP2Q5QGT7 225 aa29.12■■■□□ 2.25
NPHP3-202ENST00000383282 LILRA6Q6PI73 481 aa29.12■■■□□ 2.25
NPHP3-202ENST00000383282 CEP57Q86XR8 500 aa29.12■■■□□ 2.25
NPHP3-202ENST00000383282 KIFAP3Q92845 792 aa29.12■■■□□ 2.25
NPHP3-202ENST00000383282 NXPE3Q969Y0 559 aa29.12■■■□□ 2.25
NPHP3-202ENST00000383282 PRKD2Q9BZL6 878 aa29.12■■■□□ 2.25
NPHP3-202ENST00000383282 CCDC113Q9H0I3 377 aa29.12■■■□□ 2.25
NPHP3-202ENST00000383282 STK24Q9Y6E0 443 aa29.12■■■□□ 2.25
NPHP3-202ENST00000383282 CACNA1HO95180 2353 aa29.11■■■□□ 2.25
NPHP3-202ENST00000383282 PLXNA3P51805 1871 aa29.11■■■□□ 2.25
NPHP3-202ENST00000383282 PTGESO14684 152 aa29.11■■■□□ 2.25
NPHP3-202ENST00000383282 KIF4AO95239 1232 aa29.11■■■□□ 2.25
NPHP3-202ENST00000383282 FXR2P51116 673 aaKnown RBP eCLIP29.11■■■□□ 2.25
NPHP3-202ENST00000383282 PRSS55Q6UWB4 352 aaPredicted RBP29.11■■■□□ 2.25
NPHP3-202ENST00000383282 APBB1IPQ7Z5R6 666 aaPredicted RBP29.11■■■□□ 2.25
NPHP3-202ENST00000383282 MYADMQ96S97 322 aa29.11■■■□□ 2.25
NPHP3-202ENST00000383282 RAB34Q9BZG1 259 aa29.11■■■□□ 2.25
NPHP3-202ENST00000383282 BHMT2Q9H2M3 363 aa29.11■■■□□ 2.25
NPHP3-202ENST00000383282 SH2B1Q9NRF2 756 aaPredicted RBP29.11■■■□□ 2.25
NPHP3-202ENST00000383282 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP29.11■■■□□ 2.25
NPHP3-202ENST00000383282 LRWD1Q9UFC0 647 aa29.11■■■□□ 2.25
NPHP3-202ENST00000383282 FAM171A1Q5VUB5 890 aa29.1■■■□□ 2.25
NPHP3-202ENST00000383282 CWF19L1Q69YN2 538 aaKnown RBP29.1■■■□□ 2.25
NPHP3-202ENST00000383282 PDXDC1Q6P996 788 aa29.1■■■□□ 2.25
NPHP3-202ENST00000383282 SIX5Q8N196 739 aa29.1■■■□□ 2.25
NPHP3-202ENST00000383282 PIK3R5Q8WYR1 880 aa29.1■■■□□ 2.25
NPHP3-202ENST00000383282 ZMYND10O75800 440 aa29.09■■■□□ 2.25
NPHP3-202ENST00000383282 AOC1P19801 751 aa29.09■■■□□ 2.25
NPHP3-202ENST00000383282 PSMD5Q16401 504 aa29.09■■■□□ 2.25
NPHP3-202ENST00000383282 LIN9Q5TKA1 542 aa29.09■■■□□ 2.25
NPHP3-202ENST00000383282 GET4Q7L5D6 327 aaPredicted RBP29.09■■■□□ 2.25
NPHP3-202ENST00000383282 RTP3Q9BQQ7 232 aa29.09■■■□□ 2.25
NPHP3-202ENST00000383282 KIFC3Q9BVG8 833 aa29.09■■■□□ 2.25
NPHP3-202ENST00000383282 USP20Q9Y2K6 914 aa29.09■■■□□ 2.25
NPHP3-202ENST00000383282 GDAQ9Y2T3 454 aa29.09■■■□□ 2.25
NPHP3-202ENST00000383282 NARSO43776 548 aaKnown RBP29.08■■■□□ 2.25
NPHP3-202ENST00000383282 RFX1P22670 979 aa29.08■■■□□ 2.25
NPHP3-202ENST00000383282 ATF7IP2Q5U623 682 aa29.08■■■□□ 2.25
NPHP3-202ENST00000383282 EEF1DP3Q658K8 133 aa29.08■■■□□ 2.25
NPHP3-202ENST00000383282 RSAD2Q8WXG1 361 aa29.08■■■□□ 2.25
NPHP3-202ENST00000383282 WNT16Q9UBV4 365 aa29.08■■■□□ 2.25
NPHP3-202ENST00000383282 FBXW11Q9UKB1 542 aa29.08■■■□□ 2.25
NPHP3-202ENST00000383282 KIAA1024Q9UPX6 916 aa29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms