RNA–Protein interactions for RNA: ENST00000382671.8

PSMD13-202, Transcript of proteasome 26S subunit, non-ATPase 13, humanhuman

TSL 1 (best)

Gene PSMD13, Length 1,489 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD13-202ENST00000382671 PPP2R3CQ969Q6 453 aa17.31■□□□□ 0.36
PSMD13-202ENST00000382671 DHX58Q96C10 678 aa17.31■□□□□ 0.36
PSMD13-202ENST00000382671 ZBTB45Q96K62 511 aaPredicted RBP17.31■□□□□ 0.36
PSMD13-202ENST00000382671 PYM1Q9BRP8 204 aaKnown RBP17.31■□□□□ 0.36
PSMD13-202ENST00000382671 FAN1Q9Y2M0 1017 aa17.31■□□□□ 0.36
PSMD13-202ENST00000382671 TCF20Q9UGU0 1960 aaKnown RBP17.3■□□□□ 0.36
PSMD13-202ENST00000382671 ANK1P16157 1881 aa17.3■□□□□ 0.36
PSMD13-202ENST00000382671 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.3■□□□□ 0.36
PSMD13-202ENST00000382671 PTGESO14684 152 aa17.3■□□□□ 0.36
PSMD13-202ENST00000382671 NRP1O14786 923 aa17.3■□□□□ 0.36
PSMD13-202ENST00000382671 NCK2O43639 380 aa17.3■□□□□ 0.36
PSMD13-202ENST00000382671 PIGRP01833 764 aa17.3■□□□□ 0.36
PSMD13-202ENST00000382671 AMPD3Q01432 767 aa17.3■□□□□ 0.36
PSMD13-202ENST00000382671 MCL1Q07820 350 aa17.3■□□□□ 0.36
PSMD13-202ENST00000382671 NOLC1Q14978 699 aaKnown RBP eCLIP17.3■□□□□ 0.361e-7■□□□□ 9.1
PSMD13-202ENST00000382671 ZNF720Q7Z2F6 126 aa17.3■□□□□ 0.36
PSMD13-202ENST00000382671 ZBTB33Q86T24 672 aa17.3■□□□□ 0.36
PSMD13-202ENST00000382671 DDX53Q86TM3 631 aaKnown RBP17.3■□□□□ 0.36
PSMD13-202ENST00000382671 CEP120Q8N960 986 aa17.3■□□□□ 0.36
PSMD13-202ENST00000382671 MICAL1Q8TDZ2 1067 aa17.3■□□□□ 0.36
PSMD13-202ENST00000382671 BCL7CQ8WUZ0 217 aaPredicted RBP17.3■□□□□ 0.36
PSMD13-202ENST00000382671 BICD1Q96G01 975 aa17.3■□□□□ 0.36
PSMD13-202ENST00000382671 CCDC94Q9BW85 323 aaPredicted RBP17.3■□□□□ 0.36
PSMD13-202ENST00000382671 NGRNQ9NPE2 291 aaKnown RBP17.3■□□□□ 0.36
PSMD13-202ENST00000382671 STK39Q9UEW8 545 aa17.3■□□□□ 0.36
PSMD13-202ENST00000382671 CLDN3O15551 220 aa17.29■□□□□ 0.36
PSMD13-202ENST00000382671 THP07101 528 aa17.29■□□□□ 0.36
PSMD13-202ENST00000382671 IDEP14735 1019 aa17.29■□□□□ 0.36
PSMD13-202ENST00000382671 CMA1P23946 247 aa17.29■□□□□ 0.36
PSMD13-202ENST00000382671 HYAL1Q12794 435 aa17.29■□□□□ 0.36
PSMD13-202ENST00000382671 CNNM4Q6P4Q7 775 aa17.29■□□□□ 0.36
PSMD13-202ENST00000382671 ADGRD2Q7Z7M1 963 aa17.29■□□□□ 0.36
PSMD13-202ENST00000382671 MAP4K3Q8IVH8 894 aa17.29■□□□□ 0.36
PSMD13-202ENST00000382671 STAMQ92783 540 aa17.29■□□□□ 0.36
PSMD13-202ENST00000382671 HVCN1Q96D96 273 aa17.29■□□□□ 0.36
PSMD13-202ENST00000382671 STRA6Q9BX79 667 aa17.29■□□□□ 0.36
PSMD13-202ENST00000382671 TRIM9Q9C026 710 aa17.29■□□□□ 0.36
PSMD13-202ENST00000382671 UBE2ZQ9H832 354 aaPredicted RBP17.29■□□□□ 0.36
PSMD13-202ENST00000382671 ENTPD7Q9NQZ7 604 aa17.29■□□□□ 0.36
PSMD13-202ENST00000382671 OLFML3Q9NRN5 406 aa17.29■□□□□ 0.36
PSMD13-202ENST00000382671 TOPORSQ9NS56 1045 aaPredicted RBP17.29■□□□□ 0.36
PSMD13-202ENST00000382671 PANK4Q9NVE7 773 aa17.29■□□□□ 0.36
PSMD13-202ENST00000382671 ANKFY1Q9P2R3 1169 aa17.29■□□□□ 0.36
PSMD13-202ENST00000382671 KCNH3Q9ULD8 1083 aa17.29■□□□□ 0.36
PSMD13-202ENST00000382671 PCDHGC5Q9Y5F6 944 aa17.29■□□□□ 0.36
PSMD13-202ENST00000382671 XIRP2A4UGR9 3374 aa17.28■□□□□ 0.36
PSMD13-202ENST00000382671 NCOR1O75376 2440 aa17.28■□□□□ 0.36
PSMD13-202ENST00000382671 HNRNPDLO14979 420 aaKnown RBP17.28■□□□□ 0.36
PSMD13-202ENST00000382671 NR1I2O75469 434 aa17.28■□□□□ 0.36
PSMD13-202ENST00000382671 PPP1R37O75864 691 aa17.28■□□□□ 0.36
PSMD13-202ENST00000382671 OR1G1P47890 313 aa17.28■□□□□ 0.36
PSMD13-202ENST00000382671 LIG4P49917 911 aa17.28■□□□□ 0.36
PSMD13-202ENST00000382671 YARSP54577 528 aaKnown RBP17.28■□□□□ 0.36
PSMD13-202ENST00000382671 MRPS5P82675 430 aaKnown RBP17.28■□□□□ 0.36
PSMD13-202ENST00000382671 TUSC3Q13454 348 aa17.28■□□□□ 0.36
PSMD13-202ENST00000382671 NAB2Q15742 525 aa17.28■□□□□ 0.36
PSMD13-202ENST00000382671 ZC2HC1CQ53FD0 456 aaPredicted RBP17.28■□□□□ 0.36
PSMD13-202ENST00000382671 HERC4Q5GLZ8 1057 aaPredicted RBP17.28■□□□□ 0.36
PSMD13-202ENST00000382671 TMC7Q7Z402 723 aa17.28■□□□□ 0.36
PSMD13-202ENST00000382671 CCDC65Q8IXS2 484 aa17.28■□□□□ 0.36
PSMD13-202ENST00000382671 PABPC5Q96DU9 382 aaKnown RBP17.28■□□□□ 0.36
PSMD13-202ENST00000382671 C7orf25Q9BPX7 421 aa17.28■□□□□ 0.36
PSMD13-202ENST00000382671 TCF25Q9BQ70 676 aa17.28■□□□□ 0.36
PSMD13-202ENST00000382671 CXCL16Q9H2A7 254 aa17.28■□□□□ 0.36
PSMD13-202ENST00000382671 MRPL44Q9H9J2 332 aaKnown RBP17.28■□□□□ 0.36
PSMD13-202ENST00000382671 OSTNP61366 133 aa17.27■□□□□ 0.36
PSMD13-202ENST00000382671 TFF2Q03403 129 aa17.27■□□□□ 0.36
PSMD13-202ENST00000382671 BMS1Q14692 1282 aaKnown RBP17.27■□□□□ 0.36
PSMD13-202ENST00000382671 AAK1Q2M2I8 961 aa17.27■□□□□ 0.36
PSMD13-202ENST00000382671 CTC1Q2NKJ3 1217 aa17.27■□□□□ 0.36
PSMD13-202ENST00000382671 XKR4Q5GH76 650 aa17.27■□□□□ 0.36
PSMD13-202ENST00000382671 PLPP4Q5VZY2 271 aa17.27■□□□□ 0.36
PSMD13-202ENST00000382671 ALKAL1Q6UXT8 129 aa17.27■□□□□ 0.36
PSMD13-202ENST00000382671 VPS52Q8N1B4 723 aa17.27■□□□□ 0.36
PSMD13-202ENST00000382671 ACAP3Q96P50 834 aa17.27■□□□□ 0.36
PSMD13-202ENST00000382671 PPP1R10Q96QC0 940 aaKnown RBP17.27■□□□□ 0.36
PSMD13-202ENST00000382671 VN1R3Q9BXE9 311 aa17.27■□□□□ 0.36
PSMD13-202ENST00000382671 HAPLN2Q9GZV7 340 aa17.27■□□□□ 0.36
PSMD13-202ENST00000382671 ZBP1Q9H171 429 aa17.27■□□□□ 0.36
PSMD13-202ENST00000382671 MARCH5Q9NX47 278 aa17.27■□□□□ 0.36
PSMD13-202ENST00000382671 HPSEQ9Y251 543 aa17.27■□□□□ 0.36
PSMD13-202ENST00000382671 PRG3Q9Y2Y8 225 aaPredicted RBP17.27■□□□□ 0.36
PSMD13-202ENST00000382671 FAM237AA0A1B0GTK4 181 aa17.26■□□□□ 0.35
PSMD13-202ENST00000382671 HARSP12081 509 aaKnown RBP17.26■□□□□ 0.35
PSMD13-202ENST00000382671 PFKFB1P16118 471 aa17.26■□□□□ 0.35
PSMD13-202ENST00000382671 GTF2F1P35269 517 aaKnown RBP eCLIP17.26■□□□□ 0.357e-11■■■■■ 36.4
PSMD13-202ENST00000382671 MATR3P43243 847 aaKnown RBP eCLIP17.26■□□□□ 0.351e-9■■■□□ 18.2
PSMD13-202ENST00000382671 NRIP1P48552 1158 aa17.26■□□□□ 0.35
PSMD13-202ENST00000382671 ALCAMQ13740 583 aa17.26■□□□□ 0.35
PSMD13-202ENST00000382671 SMC1AQ14683 1233 aaKnown RBP17.26■□□□□ 0.35
PSMD13-202ENST00000382671 SLC39A4Q6P5W5 647 aa17.26■□□□□ 0.35
PSMD13-202ENST00000382671 EFHBQ8N7U6 833 aa17.26■□□□□ 0.35
PSMD13-202ENST00000382671 SNX27Q96L92 541 aa17.26■□□□□ 0.35
PSMD13-202ENST00000382671 ASB2Q96Q27 587 aa17.26■□□□□ 0.35
PSMD13-202ENST00000382671 CDCA3Q99618 268 aaPredicted RBP17.26■□□□□ 0.35
PSMD13-202ENST00000382671 COLEC11Q9BWP8 271 aa17.26■□□□□ 0.35
PSMD13-202ENST00000382671 IGFLR1Q9H665 355 aa17.26■□□□□ 0.35
PSMD13-202ENST00000382671 TLE6Q9H808 572 aa17.26■□□□□ 0.35
PSMD13-202ENST00000382671 TBC1D7Q9P0N9 293 aa17.26■□□□□ 0.35
PSMD13-202ENST00000382671 USP25Q9UHP3 1055 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms