RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 ATP4AP20648 1035 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 HADHAP40939 763 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 PPARAQ07869 468 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 AP1B1Q10567 949 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 CWF19L1Q69YN2 538 aaKnown RBP6.07□□□□□ -1.44
RFC1-202ENST00000381897 SRRM1Q8IYB3 904 aaKnown RBP6.07□□□□□ -1.44
RFC1-202ENST00000381897 RGL4Q8IZJ4 473 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 MYOCDQ8IZQ8 938 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 SUPT20HQ8NEM7 779 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 PIP4K2CQ8TBX8 421 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 LZTS2Q9BRK4 669 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 ZKSCAN3Q9BRR0 538 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 ZC3H12CQ9C0D7 883 aaKnown RBP6.07□□□□□ -1.44
RFC1-202ENST00000381897 KLHL25Q9H0H3 589 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 DHX36Q9H2U1 1008 aaKnown RBP6.07□□□□□ -1.44
RFC1-202ENST00000381897 AZI2Q9H6S1 392 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 ETNK1Q9HBU6 452 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 NOC2LQ9Y3T9 749 aaKnown RBP6.07□□□□□ -1.44
RFC1-202ENST00000381897 ZNF233A6NK53 670 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 RAD51CO43502 376 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 RNASEH2AO75792 299 aaKnown RBP6.07□□□□□ -1.44
RFC1-202ENST00000381897 MAPK3P27361 379 aaPredicted RBP6.07□□□□□ -1.44
RFC1-202ENST00000381897 RFC4P35249 363 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 NT5C2P49902 561 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 RAB27AP51159 221 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 PSMD7P51665 324 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 PROSER3Q2NL68 480 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 MAP3K21Q5TCX8 1036 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 LLGL2Q6P1M3 1020 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 CCDC105Q8IYK2 499 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 C10orf53Q8N6V4 93 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 KLHL23Q8NBE8 558 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 ATP6V1C2Q8NEY4 427 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 JPH3Q8WXH2 748 aaPredicted RBP6.07□□□□□ -1.44
RFC1-202ENST00000381897 EDEM1Q92611 657 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 HAUS1Q96CS2 278 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 B3GALT6Q96L58 329 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 ROPN1BQ9BZX4 212 aaPredicted RBP6.07□□□□□ -1.44
RFC1-202ENST00000381897 ROPN1Q9HAT0 212 aaPredicted RBP6.07□□□□□ -1.44
RFC1-202ENST00000381897 STK17AQ9UEE5 414 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 HCN4Q9Y3Q4 1203 aa6.07□□□□□ -1.44
RFC1-202ENST00000381897 MAGEA13PA6NCF6 341 aa6.06□□□□□ -1.44
RFC1-202ENST00000381897 SPDYE3A6NKU9 549 aa6.06□□□□□ -1.44
RFC1-202ENST00000381897 PIK3CDO00329 1044 aa6.06□□□□□ -1.44
RFC1-202ENST00000381897 NVLO15381 856 aaKnown RBP6.06□□□□□ -1.44
RFC1-202ENST00000381897 PJA2O43164 708 aa6.06□□□□□ -1.44
RFC1-202ENST00000381897 GAS8O95995 478 aa6.06□□□□□ -1.44
RFC1-202ENST00000381897 FOSL2P15408 326 aa6.06□□□□□ -1.44
RFC1-202ENST00000381897 CD44P16070 742 aaKnown RBP6.06□□□□□ -1.44
RFC1-202ENST00000381897 CTNNA2P26232 953 aa6.06□□□□□ -1.44
RFC1-202ENST00000381897 RPS6KA3P51812 740 aa6.06□□□□□ -1.44
RFC1-202ENST00000381897 MRPS25P82663 173 aaKnown RBP6.06□□□□□ -1.44
RFC1-202ENST00000381897 GRIK3Q13003 919 aa6.06□□□□□ -1.44
RFC1-202ENST00000381897 PWP1Q13610 501 aa6.06□□□□□ -1.44
RFC1-202ENST00000381897 KPNB1Q14974 876 aaKnown RBP6.06□□□□□ -1.44
RFC1-202ENST00000381897 NAB2Q15742 525 aa6.06□□□□□ -1.44
RFC1-202ENST00000381897 LINC01559Q495D7 138 aa6.06□□□□□ -1.44
RFC1-202ENST00000381897 BTNL9Q6UXG8 535 aa6.06□□□□□ -1.44
RFC1-202ENST00000381897 FOXP4Q8IVH2 680 aaPredicted RBP6.06□□□□□ -1.44
RFC1-202ENST00000381897 ZSCAN10Q96SZ4 725 aaPredicted RBP6.06□□□□□ -1.44
RFC1-202ENST00000381897 TGIF2Q9GZN2 237 aa6.06□□□□□ -1.44
RFC1-202ENST00000381897 SLC52A2Q9HAB3 445 aa6.06□□□□□ -1.44
RFC1-202ENST00000381897 ZSWIM5Q9P217 1185 aa6.06□□□□□ -1.44
RFC1-202ENST00000381897 PAIP2BQ9ULR5 123 aaKnown RBP6.06□□□□□ -1.44
RFC1-202ENST00000381897 PLAGL2Q9UPG8 496 aa6.06□□□□□ -1.44
RFC1-202ENST00000381897 H0Y3Z8 333 aa6.06□□□□□ -1.44
RFC1-202ENST00000381897 OPHN1O60890 802 aa6.06□□□□□ -1.44
RFC1-202ENST00000381897 GFPT2O94808 682 aa6.06□□□□□ -1.44
RFC1-202ENST00000381897 RHOBTB3O94955 611 aa6.06□□□□□ -1.44
RFC1-202ENST00000381897 VHLP40337 213 aa6.06□□□□□ -1.44
RFC1-202ENST00000381897 ANTXR2P58335 489 aa6.06□□□□□ -1.44
RFC1-202ENST00000381897 BTG3Q14201 252 aaPredicted RBP6.06□□□□□ -1.44
RFC1-202ENST00000381897 LRRC41Q15345 812 aa6.06□□□□□ -1.44
RFC1-202ENST00000381897 LETM2Q2VYF4 491 aa6.06□□□□□ -1.44
RFC1-202ENST00000381897 HEATR3Q7Z4Q2 680 aa6.06□□□□□ -1.44
RFC1-202ENST00000381897 ZC3H18Q86VM9 953 aaKnown RBP6.06□□□□□ -1.44
RFC1-202ENST00000381897 ERMNQ8TAM6 284 aa6.06□□□□□ -1.44
RFC1-202ENST00000381897 MAGEB10Q96LZ2 347 aaPredicted RBP6.06□□□□□ -1.44
RFC1-202ENST00000381897 MFRPQ9BY79 579 aa6.06□□□□□ -1.44
RFC1-202ENST00000381897 CRNKL1Q9BZJ0 848 aaKnown RBP6.06□□□□□ -1.44
RFC1-202ENST00000381897 ATP6V0A2Q9Y487 856 aa6.06□□□□□ -1.44
RFC1-202ENST00000381897 XRN1Q8IZH2 1706 aaKnown RBP6.06□□□□□ -1.44
RFC1-202ENST00000381897 PCDH11XQ9BZA7 1347 aa6.06□□□□□ -1.44
RFC1-202ENST00000381897 PCDH11YQ9BZA8 1340 aa6.06□□□□□ -1.44
RFC1-202ENST00000381897 FOXP2O15409 715 aa6.06□□□□□ -1.44
RFC1-202ENST00000381897 SKAP2O75563 359 aaPredicted RBP6.06□□□□□ -1.44
RFC1-202ENST00000381897 ZWINTO95229 277 aa6.06□□□□□ -1.44
RFC1-202ENST00000381897 GGPS1O95749 300 aa6.06□□□□□ -1.44
RFC1-202ENST00000381897 OR52Z1P0C646 297 aa6.06□□□□□ -1.44
RFC1-202ENST00000381897 CYP7A1P22680 504 aa6.06□□□□□ -1.44
RFC1-202ENST00000381897 NPTX2P47972 431 aa6.06□□□□□ -1.44
RFC1-202ENST00000381897 PLTPP55058 493 aa6.06□□□□□ -1.44
RFC1-202ENST00000381897 GRSF1Q12849 480 aaKnown RBP eCLIP6.06□□□□□ -1.44
RFC1-202ENST00000381897 CAMK2DQ13557 499 aa6.06□□□□□ -1.44
RFC1-202ENST00000381897 BLMHQ13867 455 aa6.06□□□□□ -1.44
RFC1-202ENST00000381897 NONOQ15233 471 aaKnown RBP eCLIP6.06□□□□□ -1.44
RFC1-202ENST00000381897 TBCCQ15814 346 aa6.06□□□□□ -1.44
RFC1-202ENST00000381897 GJC2Q5T442 439 aaPredicted RBP6.06□□□□□ -1.44
RFC1-202ENST00000381897 EMC10Q5UCC4 262 aa6.06□□□□□ -1.44
RFC1-202ENST00000381897 THOC7Q6I9Y2 204 aaKnown RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms