RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 ARMCX5Q6P1M9 558 aa16.87■□□□□ 0.29
PDGFB-202ENST00000381551 SASS6Q6UVJ0 657 aa16.87■□□□□ 0.29
PDGFB-202ENST00000381551 CRELD2Q6UXH1 353 aaPredicted RBP16.87■□□□□ 0.29
PDGFB-202ENST00000381551 SLC9A9Q8IVB4 645 aa16.87■□□□□ 0.29
PDGFB-202ENST00000381551 P2RX5Q93086 422 aa16.87■□□□□ 0.29
PDGFB-202ENST00000381551 ZNF689Q96CS4 500 aaPredicted RBP16.87■□□□□ 0.29
PDGFB-202ENST00000381551 ACAP3Q96P50 834 aa16.87■□□□□ 0.29
PDGFB-202ENST00000381551 RAD9AQ99638 391 aa16.87■□□□□ 0.29
PDGFB-202ENST00000381551 ZBED2Q9BTP6 218 aa16.87■□□□□ 0.29
PDGFB-202ENST00000381551 CCDC94Q9BW85 323 aaPredicted RBP16.87■□□□□ 0.29
PDGFB-202ENST00000381551 HSPBP1Q9NZL4 362 aa16.87■□□□□ 0.29
PDGFB-202ENST00000381551 PARP2Q9UGN5 583 aa16.87■□□□□ 0.29
PDGFB-202ENST00000381551 CPSF3Q9UKF6 684 aaKnown RBP16.87■□□□□ 0.29
PDGFB-202ENST00000381551 PTPRSQ13332 1948 aa16.86■□□□□ 0.29
PDGFB-202ENST00000381551 MEFVO15553 781 aaPredicted RBP16.86■□□□□ 0.29
PDGFB-202ENST00000381551 HOXA2O43364 376 aa16.86■□□□□ 0.29
PDGFB-202ENST00000381551 EXTL3O43909 919 aa16.86■□□□□ 0.29
PDGFB-202ENST00000381551 RECQL4O94761 1208 aa16.86■□□□□ 0.29
PDGFB-202ENST00000381551 LDHAP00338 332 aaKnown RBP16.86■□□□□ 0.29
PDGFB-202ENST00000381551 NR3C1P04150 777 aa16.86■□□□□ 0.29
PDGFB-202ENST00000381551 TNFSF9P41273 254 aa16.86■□□□□ 0.29
PDGFB-202ENST00000381551 GATMP50440 423 aa16.86■□□□□ 0.29
PDGFB-202ENST00000381551 AFF1P51825 1210 aaKnown RBP16.86■□□□□ 0.29
PDGFB-202ENST00000381551 POU5F1Q01860 360 aaKnown RBP16.86■□□□□ 0.29
PDGFB-202ENST00000381551 NFIL3Q16649 462 aa16.86■□□□□ 0.29
PDGFB-202ENST00000381551 EDRF1Q3B7T1 1238 aa16.86■□□□□ 0.29
PDGFB-202ENST00000381551 SLC10A6Q3KNW5 377 aa16.86■□□□□ 0.29
PDGFB-202ENST00000381551 KLHL10Q6JEL2 608 aa16.86■□□□□ 0.29
PDGFB-202ENST00000381551 ALKAL1Q6UXT8 129 aa16.86■□□□□ 0.29
PDGFB-202ENST00000381551 GSTCDQ8NEC7 633 aa16.86■□□□□ 0.29
PDGFB-202ENST00000381551 HELQQ8TDG4 1101 aa16.86■□□□□ 0.29
PDGFB-202ENST00000381551 SAAL1Q96ER3 474 aa16.86■□□□□ 0.29
PDGFB-202ENST00000381551 FBXL18Q96ME1 805 aa16.86■□□□□ 0.29
PDGFB-202ENST00000381551 CASD1Q96PB1 797 aa16.86■□□□□ 0.29
PDGFB-202ENST00000381551 GAD1Q99259 594 aa16.86■□□□□ 0.29
PDGFB-202ENST00000381551 FAM213AQ9BRX8 229 aa16.86■□□□□ 0.29
PDGFB-202ENST00000381551 CXCL16Q9H2A7 254 aa16.86■□□□□ 0.29
PDGFB-202ENST00000381551 RSAD1Q9HA92 442 aa16.86■□□□□ 0.29
PDGFB-202ENST00000381551 RC3H2Q9HBD1 1191 aaKnown RBP16.86■□□□□ 0.29
PDGFB-202ENST00000381551 KLK14Q9P0G3 267 aa16.86■□□□□ 0.29
PDGFB-202ENST00000381551 INSL6Q9Y581 213 aa16.86■□□□□ 0.29
PDGFB-202ENST00000381551 GOLGA8IPA6NC78 632 aa16.85■□□□□ 0.29
PDGFB-202ENST00000381551 ARL5CA6NH57 179 aa16.85■□□□□ 0.29
PDGFB-202ENST00000381551 GOLGA8JA6NMD2 632 aa16.85■□□□□ 0.29
PDGFB-202ENST00000381551 INPPL1O15357 1258 aa16.85■□□□□ 0.29
PDGFB-202ENST00000381551 ADRB2P07550 413 aa16.85■□□□□ 0.29
PDGFB-202ENST00000381551 CYP2J2P51589 502 aa16.85■□□□□ 0.29
PDGFB-202ENST00000381551 RABGGTBP53611 331 aa16.85■□□□□ 0.29
PDGFB-202ENST00000381551 LRRC63Q05C16 580 aa16.85■□□□□ 0.29
PDGFB-202ENST00000381551 ENOX2Q16206 610 aaKnown RBP16.85■□□□□ 0.29
PDGFB-202ENST00000381551 XKR4Q5GH76 650 aa16.85■□□□□ 0.29
PDGFB-202ENST00000381551 CT47A1Q5JQC4 288 aaPredicted RBP16.85■□□□□ 0.29
PDGFB-202ENST00000381551 FOXR2Q6PJQ5 311 aa16.85■□□□□ 0.29
PDGFB-202ENST00000381551 GLB1LQ6UWU2 654 aa16.85■□□□□ 0.29
PDGFB-202ENST00000381551 GPD1LQ8N335 351 aa16.85■□□□□ 0.29
PDGFB-202ENST00000381551 XXYLT1Q8NBI6 393 aa16.85■□□□□ 0.29
PDGFB-202ENST00000381551 NELFBQ8WX92 580 aa16.85■□□□□ 0.29
PDGFB-202ENST00000381551 ZFP42Q96MM3 310 aa16.85■□□□□ 0.29
PDGFB-202ENST00000381551 MED15Q96RN5 788 aa16.85■□□□□ 0.29
PDGFB-202ENST00000381551 TMEM117Q9H0C3 514 aa16.85■□□□□ 0.29
PDGFB-202ENST00000381551 KIAA1586Q9HCI6 787 aa16.85■□□□□ 0.29
PDGFB-202ENST00000381551 MIOSQ9NXC5 875 aa16.85■□□□□ 0.29
PDGFB-202ENST00000381551 TRIM49BA6NDI0 452 aa16.84■□□□□ 0.29
PDGFB-202ENST00000381551 TLL1O43897 1013 aa16.84■□□□□ 0.29
PDGFB-202ENST00000381551 NR2F2P24468 414 aa16.84■□□□□ 0.29
PDGFB-202ENST00000381551 RPL13P26373 211 aaKnown RBP16.84■□□□□ 0.29
PDGFB-202ENST00000381551 YARSP54577 528 aaKnown RBP16.84■□□□□ 0.29
PDGFB-202ENST00000381551 PAK1Q13153 545 aa16.84■□□□□ 0.29
PDGFB-202ENST00000381551 ADAM9Q13443 819 aa16.84■□□□□ 0.29
PDGFB-202ENST00000381551 ZSCAN23Q3MJ62 389 aa16.84■□□□□ 0.29
PDGFB-202ENST00000381551 TTI2Q6NXR4 508 aa16.84■□□□□ 0.29
PDGFB-202ENST00000381551 ABI1Q8IZP0 508 aa16.84■□□□□ 0.29
PDGFB-202ENST00000381551 YME1L1Q96TA2 773 aa16.84■□□□□ 0.29
PDGFB-202ENST00000381551 TSG101Q99816 390 aa16.84■□□□□ 0.29
PDGFB-202ENST00000381551 RPF1Q9H9Y2 349 aaKnown RBP16.84■□□□□ 0.29
PDGFB-202ENST00000381551 PLEKHA5Q9HAU0 1116 aa16.84■□□□□ 0.29
PDGFB-202ENST00000381551 TOPORSQ9NS56 1045 aaPredicted RBP16.84■□□□□ 0.29
PDGFB-202ENST00000381551 KANSL3Q9P2N6 904 aa16.84■□□□□ 0.29
PDGFB-202ENST00000381551 DACH1Q9UI36 760 aa16.84■□□□□ 0.29
PDGFB-202ENST00000381551 RWDD2AQ9UIY3 292 aa16.84■□□□□ 0.29
PDGFB-202ENST00000381551 CTNND2Q9UQB3 1225 aa16.84■□□□□ 0.29
PDGFB-202ENST00000381551 LAMA2P24043 3122 aaKnown RBP16.83■□□□□ 0.29
PDGFB-202ENST00000381551 TTC26A0AVF1 554 aa16.83■□□□□ 0.28
PDGFB-202ENST00000381551 BICDL2A1A5D9 508 aa16.83■□□□□ 0.28
PDGFB-202ENST00000381551 SYCE3A1L190 88 aa16.83■□□□□ 0.28
PDGFB-202ENST00000381551 ZNF233A6NK53 670 aa16.83■□□□□ 0.28
PDGFB-202ENST00000381551 TBKBP1A7MCY6 615 aa16.83■□□□□ 0.28
PDGFB-202ENST00000381551 EXOC3O60645 756 aa16.83■□□□□ 0.28
PDGFB-202ENST00000381551 CXCL8P10145 99 aa16.83■□□□□ 0.28
PDGFB-202ENST00000381551 ERCC5P28715 1186 aaPredicted RBP16.83■□□□□ 0.28
PDGFB-202ENST00000381551 MLH1P40692 756 aa16.83■□□□□ 0.28
PDGFB-202ENST00000381551 STX17P56962 302 aa16.83■□□□□ 0.28
PDGFB-202ENST00000381551 FKBP3Q00688 224 aaKnown RBP16.83■□□□□ 0.28
PDGFB-202ENST00000381551 TYRO3Q06418 890 aa16.83■□□□□ 0.28
PDGFB-202ENST00000381551 SNRNP35Q16560 246 aaKnown RBP16.83■□□□□ 0.28
PDGFB-202ENST00000381551 STX1AQ16623 288 aa16.83■□□□□ 0.28
PDGFB-202ENST00000381551 LRIT3Q3SXY7 679 aa16.83■□□□□ 0.28
PDGFB-202ENST00000381551 NOMO2Q5JPE7 1267 aa16.83■□□□□ 0.28
PDGFB-202ENST00000381551 LRRC55Q6ZSA7 311 aa16.83■□□□□ 0.28
PDGFB-202ENST00000381551 CBWD2Q8IUF1 395 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms