RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 TMED2Q15363 201 aa14.82□□□□□ -0.04
SDC1-202ENST00000381150 CPNE8Q86YQ8 564 aa14.82□□□□□ -0.04
SDC1-202ENST00000381150 ZC3H3Q8IXZ2 948 aaKnown RBP14.82□□□□□ -0.04
SDC1-202ENST00000381150 SLFN12Q8IYM2 578 aa14.82□□□□□ -0.04
SDC1-202ENST00000381150 CNKSR1Q969H4 720 aa14.82□□□□□ -0.04
SDC1-202ENST00000381150 CENPTQ96BT3 561 aa14.82□□□□□ -0.04
SDC1-202ENST00000381150 C9orf72Q96LT7 481 aa14.82□□□□□ -0.04
SDC1-202ENST00000381150 ALG6Q9Y672 507 aa14.82□□□□□ -0.04
SDC1-202ENST00000381150 ATAD5Q96QE3 1844 aa14.82□□□□□ -0.04
SDC1-202ENST00000381150 TBX3O15119 743 aa14.82□□□□□ -0.04
SDC1-202ENST00000381150 CIITAP33076 1130 aa14.82□□□□□ -0.04
SDC1-202ENST00000381150 PSMC6P62333 389 aa14.82□□□□□ -0.04
SDC1-202ENST00000381150 SLMAPQ14BN4 828 aa14.82□□□□□ -0.04
SDC1-202ENST00000381150 TSNAXIP1Q2TAA8 658 aa14.82□□□□□ -0.04
SDC1-202ENST00000381150 SYDE2Q5VT97 1194 aa14.82□□□□□ -0.04
SDC1-202ENST00000381150 PRUNE1Q86TP1 453 aa14.82□□□□□ -0.04
SDC1-202ENST00000381150 FBXO11Q86XK2 927 aa14.82□□□□□ -0.04
SDC1-202ENST00000381150 RAB3IPQ96QF0 476 aaPredicted RBP14.82□□□□□ -0.04
SDC1-202ENST00000381150 C2CD2Q9Y426 696 aa14.82□□□□□ -0.04
SDC1-202ENST00000381150 RSPH10B2B2RC85 870 aa14.81□□□□□ -0.04
SDC1-202ENST00000381150 POC1B-GALNT4F8VUJ3 575 aa14.81□□□□□ -0.04
SDC1-202ENST00000381150 RSPH10BP0C881 870 aa14.81□□□□□ -0.04
SDC1-202ENST00000381150 BNIP1Q12981 228 aa14.81□□□□□ -0.04
SDC1-202ENST00000381150 TBC1D10BQ4KMP7 808 aaPredicted RBP14.81□□□□□ -0.04
SDC1-202ENST00000381150 C10orf76Q5T2E6 689 aa14.81□□□□□ -0.04
SDC1-202ENST00000381150 ZDHHC24Q6UX98 284 aa14.81□□□□□ -0.04
SDC1-202ENST00000381150 SLC30A10Q6XR72 485 aa14.81□□□□□ -0.04
SDC1-202ENST00000381150 GBP7Q8N8V2 638 aaPredicted RBP14.81□□□□□ -0.04
SDC1-202ENST00000381150 CEP63Q96MT8 703 aa14.81□□□□□ -0.04
SDC1-202ENST00000381150 CDC42EP4Q9H3Q1 356 aaKnown RBP14.81□□□□□ -0.04
SDC1-202ENST00000381150 ZDHHC18Q9NUE0 388 aa14.81□□□□□ -0.04
SDC1-202ENST00000381150 DCTN4Q9UJW0 460 aa14.81□□□□□ -0.04
SDC1-202ENST00000381150 DNAJC12Q9UKB3 198 aa14.81□□□□□ -0.04
SDC1-202ENST00000381150 RGPD3A6NKT7 1758 aaPredicted RBP14.81□□□□□ -0.04
SDC1-202ENST00000381150 RGPD4Q7Z3J3 1758 aa14.81□□□□□ -0.04
SDC1-202ENST00000381150 A0A1B0GVG6 124 aa14.81□□□□□ -0.04
SDC1-202ENST00000381150 BMP3P12645 472 aa14.81□□□□□ -0.04
SDC1-202ENST00000381150 MARSP56192 900 aaKnown RBP14.81□□□□□ -0.04
SDC1-202ENST00000381150 UBL4BQ8N7F7 174 aa14.81□□□□□ -0.04
SDC1-202ENST00000381150 LNX1Q8TBB1 728 aaPredicted RBP14.81□□□□□ -0.04
SDC1-202ENST00000381150 SLCO1B3Q9NPD5 702 aa14.81□□□□□ -0.04
SDC1-202ENST00000381150 UTRNP46939 3433 aa14.81□□□□□ -0.04
SDC1-202ENST00000381150 MTM1Q13496 603 aa14.81□□□□□ -0.04
SDC1-202ENST00000381150 RCN2Q14257 317 aa14.81□□□□□ -0.04
SDC1-202ENST00000381150 PRR16Q569H4 304 aa14.81□□□□□ -0.04
SDC1-202ENST00000381150 SUPT20HQ8NEM7 779 aa14.81□□□□□ -0.04
SDC1-202ENST00000381150 ATG4AQ8WYN0 398 aa14.81□□□□□ -0.04
SDC1-202ENST00000381150 RFFLQ8WZ73 363 aa14.81□□□□□ -0.04
SDC1-202ENST00000381150 LRRC37BQ96QE4 947 aa14.81□□□□□ -0.04
SDC1-202ENST00000381150 MYLK2Q9H1R3 596 aa14.81□□□□□ -0.04
SDC1-202ENST00000381150 PFASO15067 1338 aa14.81□□□□□ -0.04
SDC1-202ENST00000381150 PITPNM2Q9BZ72 1349 aa14.81□□□□□ -0.04
SDC1-202ENST00000381150 RPA1P27694 616 aa14.8□□□□□ -0.04
SDC1-202ENST00000381150 USH1GQ495M9 461 aa14.8□□□□□ -0.04
SDC1-202ENST00000381150 TTC27Q6P3X3 843 aa14.8□□□□□ -0.04
SDC1-202ENST00000381150 CEP120Q8N960 986 aa14.8□□□□□ -0.04
SDC1-202ENST00000381150 CYP2W1Q8TAV3 490 aa14.8□□□□□ -0.04
SDC1-202ENST00000381150 PIGOQ8TEQ8 1089 aa14.8□□□□□ -0.04
SDC1-202ENST00000381150 UCMAQ8WVF2 138 aa14.8□□□□□ -0.04
SDC1-202ENST00000381150 HES6Q96HZ4 224 aa14.8□□□□□ -0.04
SDC1-202ENST00000381150 SYT15Q9BQS2 421 aa14.8□□□□□ -0.04
SDC1-202ENST00000381150 RXFP1Q9HBX9 757 aa14.8□□□□□ -0.04
SDC1-202ENST00000381150 SYNPO2Q9UMS6 1093 aa14.8□□□□□ -0.04
SDC1-202ENST00000381150 PIK3CDO00329 1044 aa14.8□□□□□ -0.04
SDC1-202ENST00000381150 FOSP01100 380 aaPredicted RBP14.8□□□□□ -0.04
SDC1-202ENST00000381150 CC2D2BQ6DHV5 1058 aa14.8□□□□□ -0.04
SDC1-202ENST00000381150 ANO7Q6IWH7 933 aa14.8□□□□□ -0.04
SDC1-202ENST00000381150 ECHDC2Q86YB7 292 aa14.8□□□□□ -0.04
SDC1-202ENST00000381150 CSRNP1Q96S65 589 aa14.8□□□□□ -0.04
SDC1-202ENST00000381150 DDX50Q9BQ39 737 aaKnown RBP14.8□□□□□ -0.04
SDC1-202ENST00000381150 VAV3Q9UKW4 847 aa14.8□□□□□ -0.04
SDC1-202ENST00000381150 PRR12Q9ULL5 1215 aa14.8□□□□□ -0.04
SDC1-202ENST00000381150 MSH4O15457 936 aa14.79□□□□□ -0.04
SDC1-202ENST00000381150 TBCAO75347 108 aaKnown RBP14.79□□□□□ -0.04
SDC1-202ENST00000381150 CYP3A4P08684 503 aa14.79□□□□□ -0.04
SDC1-202ENST00000381150 NUDT17P0C025 328 aa14.79□□□□□ -0.04
SDC1-202ENST00000381150 KRT15P19012 456 aa14.79□□□□□ -0.04
SDC1-202ENST00000381150 ECE1P42892 770 aa14.79□□□□□ -0.04
SDC1-202ENST00000381150 KLC1Q07866 573 aa14.79□□□□□ -0.04
SDC1-202ENST00000381150 GIT2Q14161 759 aa14.79□□□□□ -0.04
SDC1-202ENST00000381150 MPP2Q14168 576 aa14.79□□□□□ -0.04
SDC1-202ENST00000381150 NBPF20Q3BBV1 942 aa14.79□□□□□ -0.04
SDC1-202ENST00000381150 EIF1ADQ8N9N8 165 aaKnown RBP14.79□□□□□ -0.04
SDC1-202ENST00000381150 DNAJC9Q8WXX5 260 aa14.79□□□□□ -0.04
SDC1-202ENST00000381150 ELMO3Q96BJ8 720 aa14.79□□□□□ -0.04
SDC1-202ENST00000381150 GMLQ99445 158 aa14.79□□□□□ -0.04
SDC1-202ENST00000381150 ALG13Q9NP73 1137 aaKnown RBP14.79□□□□□ -0.04
SDC1-202ENST00000381150 ACP6Q9NPH0 428 aa14.79□□□□□ -0.04
SDC1-202ENST00000381150 MTUS1Q9ULD2 1270 aa14.79□□□□□ -0.04
SDC1-202ENST00000381150 RASA4BC9J798 803 aa14.79□□□□□ -0.04
SDC1-202ENST00000381150 RASA4O43374 803 aa14.79□□□□□ -0.04
SDC1-202ENST00000381150 CHMP2AO43633 222 aa14.79□□□□□ -0.04
SDC1-202ENST00000381150 PIAS1O75925 651 aa14.79□□□□□ -0.04
SDC1-202ENST00000381150 HOXD13P35453 343 aa14.79□□□□□ -0.04
SDC1-202ENST00000381150 ADCY8P40145 1251 aa14.79□□□□□ -0.04
SDC1-202ENST00000381150 SEPT7Q16181 437 aaKnown RBP14.79□□□□□ -0.04
SDC1-202ENST00000381150 C4orf33Q8N1A6 199 aa14.79□□□□□ -0.04
SDC1-202ENST00000381150 TAB3Q8N5C8 712 aaPredicted RBP14.79□□□□□ -0.04
SDC1-202ENST00000381150 PRELID2Q8N945 189 aa14.79□□□□□ -0.04
SDC1-202ENST00000381150 SYT2Q8N9I0 419 aaPredicted RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms