RNA–Protein interactions for RNA: ENST00000381118.7

ERCC8-202, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-202ENST00000381118 ARHGEF6Q15052 776 aa8.68□□□□□ -1.02
ERCC8-202ENST00000381118 AMHR2Q16671 573 aa8.68□□□□□ -1.02
ERCC8-202ENST00000381118 KRT39Q6A163 491 aa8.68□□□□□ -1.02
ERCC8-202ENST00000381118 GDF6Q6KF10 455 aaPredicted RBP8.68□□□□□ -1.02
ERCC8-202ENST00000381118 DPY19L2P1Q6NXN4 242 aa8.68□□□□□ -1.02
ERCC8-202ENST00000381118 PDXDC1Q6P996 788 aa8.68□□□□□ -1.02
ERCC8-202ENST00000381118 USP37Q86T82 979 aa8.68□□□□□ -1.02
ERCC8-202ENST00000381118 ZNF410Q86VK4 478 aa8.68□□□□□ -1.02
ERCC8-202ENST00000381118 TMTC1Q8IUR5 882 aa8.68□□□□□ -1.02
ERCC8-202ENST00000381118 CCAR2Q8N163 923 aaKnown RBP8.68□□□□□ -1.02
ERCC8-202ENST00000381118 SLAIN1Q8ND83 568 aa8.68□□□□□ -1.02
ERCC8-202ENST00000381118 ACRBPQ8NEB7 543 aa8.68□□□□□ -1.02
ERCC8-202ENST00000381118 IQCDQ96DY2 449 aa8.68□□□□□ -1.02
ERCC8-202ENST00000381118 INTS2Q9H0H0 1204 aaKnown RBP8.68□□□□□ -1.02
ERCC8-202ENST00000381118 SIX2Q9NPC8 291 aa8.68□□□□□ -1.02
ERCC8-202ENST00000381118 GTF2IRD1Q9UHL9 959 aa8.68□□□□□ -1.02
ERCC8-202ENST00000381118 PTPRJQ12913 1337 aa8.67□□□□□ -1.02
ERCC8-202ENST00000381118 KIAA0391O15091 583 aaKnown RBP8.67□□□□□ -1.02
ERCC8-202ENST00000381118 OGTO15294 1046 aa8.67□□□□□ -1.02
ERCC8-202ENST00000381118 FAM189A1O60320 539 aa8.67□□□□□ -1.02
ERCC8-202ENST00000381118 TSPAN1O60635 241 aa8.67□□□□□ -1.02
ERCC8-202ENST00000381118 N4BP1O75113 896 aaKnown RBP8.67□□□□□ -1.02
ERCC8-202ENST00000381118 POU5F1BQ06416 359 aa8.67□□□□□ -1.02
ERCC8-202ENST00000381118 C1QBPQ07021 282 aaKnown RBP8.67□□□□□ -1.02
ERCC8-202ENST00000381118 MCL1Q07820 350 aa8.67□□□□□ -1.02
ERCC8-202ENST00000381118 BIRC3Q13489 604 aa8.67□□□□□ -1.02
ERCC8-202ENST00000381118 ARHGAP44Q17R89 818 aa8.67□□□□□ -1.02
ERCC8-202ENST00000381118 TDRD12Q587J7 1177 aaKnown RBP8.67□□□□□ -1.02
ERCC8-202ENST00000381118 SV2AQ7L0J3 742 aa8.67□□□□□ -1.02
ERCC8-202ENST00000381118 RNF180Q86T96 592 aa8.67□□□□□ -1.02
ERCC8-202ENST00000381118 IFNLR1Q8IU57 520 aaPredicted RBP8.67□□□□□ -1.02
ERCC8-202ENST00000381118 TMEM192Q8IY95 271 aa8.67□□□□□ -1.02
ERCC8-202ENST00000381118 KLHDC9Q8NEP7 349 aa8.67□□□□□ -1.02
ERCC8-202ENST00000381118 TMEM40Q8WWA1 233 aa8.67□□□□□ -1.02
ERCC8-202ENST00000381118 PRIMPOLQ96LW4 560 aa8.67□□□□□ -1.02
ERCC8-202ENST00000381118 GCOM2Q9BZD3 368 aaPredicted RBP8.67□□□□□ -1.02
ERCC8-202ENST00000381118 CDT1Q9H211 546 aa8.67□□□□□ -1.02
ERCC8-202ENST00000381118 ADAMTS10Q9H324 1103 aa8.67□□□□□ -1.02
ERCC8-202ENST00000381118 PDZD7Q9H5P4 517 aa8.67□□□□□ -1.02
ERCC8-202ENST00000381118 TMEM8AQ9HCN3 771 aa8.67□□□□□ -1.02
ERCC8-202ENST00000381118 PTPRHQ9HD43 1115 aa8.67□□□□□ -1.02
ERCC8-202ENST00000381118 HMX1Q9NP08 348 aaPredicted RBP8.67□□□□□ -1.02
ERCC8-202ENST00000381118 PLCB1Q9NQ66 1216 aa8.67□□□□□ -1.02
ERCC8-202ENST00000381118 PLAGL2Q9UPG8 496 aa8.67□□□□□ -1.02
ERCC8-202ENST00000381118 CNTNAP2Q9UHC6 1331 aa8.67□□□□□ -1.02
ERCC8-202ENST00000381118 A0A0U1RQJ8 604 aa8.66□□□□□ -1.02
ERCC8-202ENST00000381118 CTSHP09668 335 aa8.66□□□□□ -1.02
ERCC8-202ENST00000381118 PROZP22891 400 aa8.66□□□□□ -1.02
ERCC8-202ENST00000381118 PSMD6Q15008 389 aa8.66□□□□□ -1.02
ERCC8-202ENST00000381118 MEA1Q16626 185 aa8.66□□□□□ -1.02
ERCC8-202ENST00000381118 FAM187BQ17R55 369 aa8.66□□□□□ -1.02
ERCC8-202ENST00000381118 EPC2Q52LR7 807 aa8.66□□□□□ -1.02
ERCC8-202ENST00000381118 SFMBT2Q5VUG0 894 aa8.66□□□□□ -1.02
ERCC8-202ENST00000381118 IQCEQ6IPM2 695 aa8.66□□□□□ -1.02
ERCC8-202ENST00000381118 PHLDB3Q6NSJ2 640 aa8.66□□□□□ -1.02
ERCC8-202ENST00000381118 CATSPER4Q7RTX7 472 aa8.66□□□□□ -1.02
ERCC8-202ENST00000381118 SRGAP1Q7Z6B7 1085 aa8.66□□□□□ -1.02
ERCC8-202ENST00000381118 PCSK9Q8NBP7 692 aaKnown RBP8.66□□□□□ -1.02
ERCC8-202ENST00000381118 EHBP1Q8NDI1 1231 aa8.66□□□□□ -1.02
ERCC8-202ENST00000381118 LMO3Q8TAP4 145 aa8.66□□□□□ -1.02
ERCC8-202ENST00000381118 TMC2Q8TDI7 906 aa8.66□□□□□ -1.02
ERCC8-202ENST00000381118 TAS1R2Q8TE23 839 aa8.66□□□□□ -1.02
ERCC8-202ENST00000381118 ATRIPQ8WXE1 791 aa8.66□□□□□ -1.02
ERCC8-202ENST00000381118 ZNF516Q92618 1163 aa8.66□□□□□ -1.02
ERCC8-202ENST00000381118 SEMA4DQ92854 862 aa8.66□□□□□ -1.02
ERCC8-202ENST00000381118 PPP1R13BQ96KQ4 1090 aa8.66□□□□□ -1.02
ERCC8-202ENST00000381118 PI4K2AQ9BTU6 479 aa8.66□□□□□ -1.02
ERCC8-202ENST00000381118 DEF6Q9H4E7 631 aa8.66□□□□□ -1.02
ERCC8-202ENST00000381118 NHEJ1Q9H9Q4 299 aaPredicted RBP8.66□□□□□ -1.02
ERCC8-202ENST00000381118 SPTLC3Q9NUV7 552 aa8.66□□□□□ -1.02
ERCC8-202ENST00000381118 ARHGAP20Q9P2F6 1191 aa8.66□□□□□ -1.02
ERCC8-202ENST00000381118 APEX2Q9UBZ4 518 aa8.66□□□□□ -1.02
ERCC8-202ENST00000381118 TNFSF13BQ9Y275 285 aa8.66□□□□□ -1.02
ERCC8-202ENST00000381118 PPP2R2CQ9Y2T4 447 aa8.66□□□□□ -1.02
ERCC8-202ENST00000381118 CXCL8P10145 99 aa8.66□□□□□ -1.02
ERCC8-202ENST00000381118 HSPA6P17066 643 aa8.66□□□□□ -1.02
ERCC8-202ENST00000381118 FECHP22830 423 aa8.66□□□□□ -1.02
ERCC8-202ENST00000381118 EIF4BP23588 611 aaKnown RBP8.66□□□□□ -1.02
ERCC8-202ENST00000381118 HOXC8P31273 242 aa8.66□□□□□ -1.02
ERCC8-202ENST00000381118 CLCN1P35523 988 aa8.66□□□□□ -1.02
ERCC8-202ENST00000381118 CCSAPQ6IQ19 270 aaPredicted RBP8.66□□□□□ -1.02
ERCC8-202ENST00000381118 ARHGEF19Q8IW93 802 aa8.66□□□□□ -1.02
ERCC8-202ENST00000381118 BRSK2Q8IWQ3 736 aa8.66□□□□□ -1.02
ERCC8-202ENST00000381118 PPM1KQ8N3J5 372 aa8.66□□□□□ -1.02
ERCC8-202ENST00000381118 FBXL13Q8NEE6 735 aa8.66□□□□□ -1.02
ERCC8-202ENST00000381118 WNT8BQ93098 351 aa8.66□□□□□ -1.02
ERCC8-202ENST00000381118 UBE2TQ9NPD8 197 aaPredicted RBP8.66□□□□□ -1.02
ERCC8-202ENST00000381118 RAB20Q9NX57 234 aa8.66□□□□□ -1.02
ERCC8-202ENST00000381118 DNAJC12Q9UKB3 198 aa8.66□□□□□ -1.02
ERCC8-202ENST00000381118 CPSF3Q9UKF6 684 aaKnown RBP8.66□□□□□ -1.02
ERCC8-202ENST00000381118 GRIN2DO15399 1336 aa8.66□□□□□ -1.02
ERCC8-202ENST00000381118 P4HA2O15460 535 aa8.65□□□□□ -1.02
ERCC8-202ENST00000381118 NDUFA10O95299 355 aa8.65□□□□□ -1.02
ERCC8-202ENST00000381118 CCDC175P0C221 793 aa8.65□□□□□ -1.02
ERCC8-202ENST00000381118 DARSP14868 501 aaKnown RBP8.65□□□□□ -1.02
ERCC8-202ENST00000381118 CST5P28325 142 aaPredicted RBP8.65□□□□□ -1.02
ERCC8-202ENST00000381118 KCNJ6P48051 423 aa8.65□□□□□ -1.02
ERCC8-202ENST00000381118 ACLYP53396 1101 aa8.65□□□□□ -1.02
ERCC8-202ENST00000381118 ITGA7Q13683 1181 aa8.65□□□□□ -1.02
ERCC8-202ENST00000381118 SNX17Q15036 470 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms