RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 SLC35G2Q8TBE7 412 aa13.05□□□□□ -0.32
GABPB1-203ENST00000380877 RNPC3Q96LT9 517 aaKnown RBP13.05□□□□□ -0.32
GABPB1-203ENST00000380877 PARVAQ9NVD7 372 aa13.05□□□□□ -0.32
GABPB1-203ENST00000380877 TBC1D12O60347 775 aa13.05□□□□□ -0.32
GABPB1-203ENST00000380877 KRT7P08729 469 aa13.05□□□□□ -0.32
GABPB1-203ENST00000380877 CTSHP09668 335 aa13.05□□□□□ -0.32
GABPB1-203ENST00000380877 PRPSAP1Q14558 356 aa13.05□□□□□ -0.32
GABPB1-203ENST00000380877 MUM1L1Q5H9M0 696 aa13.05□□□□□ -0.32
GABPB1-203ENST00000380877 NIPA1Q7RTP0 329 aa13.05□□□□□ -0.32
GABPB1-203ENST00000380877 TTC13Q8NBP0 860 aa13.05□□□□□ -0.32
GABPB1-203ENST00000380877 FBXO41Q8TF61 875 aa13.05□□□□□ -0.32
GABPB1-203ENST00000380877 P2RX7Q99572 595 aaKnown RBP13.05□□□□□ -0.32
GABPB1-203ENST00000380877 DNAJC7Q99615 494 aa13.05□□□□□ -0.32
GABPB1-203ENST00000380877 ZNF185O15231 689 aa13.05□□□□□ -0.32
GABPB1-203ENST00000380877 CYP3A4P08684 503 aa13.05□□□□□ -0.32
GABPB1-203ENST00000380877 PPP2R5CQ13362 524 aa13.05□□□□□ -0.32
GABPB1-203ENST00000380877 GSPT2Q8IYD1 628 aaKnown RBP13.05□□□□□ -0.32
GABPB1-203ENST00000380877 RAET1EQ8TD07 263 aa13.05□□□□□ -0.32
GABPB1-203ENST00000380877 UVRAGQ9P2Y5 699 aa13.05□□□□□ -0.32
GABPB1-203ENST00000380877 ZNF142P52746 1687 aaPredicted RBP13.05□□□□□ -0.32
GABPB1-203ENST00000380877 CPP00450 1065 aa13.05□□□□□ -0.32
GABPB1-203ENST00000380877 KLRC1P26715 233 aa13.05□□□□□ -0.32
GABPB1-203ENST00000380877 PON1P27169 355 aa13.05□□□□□ -0.32
GABPB1-203ENST00000380877 ADORA2BP29275 332 aa13.05□□□□□ -0.32
GABPB1-203ENST00000380877 NLRP11P59045 1033 aaKnown RBP13.05□□□□□ -0.32
GABPB1-203ENST00000380877 NNTQ13423 1086 aa13.05□□□□□ -0.32
GABPB1-203ENST00000380877 NYAP1Q6ZVC0 841 aa13.05□□□□□ -0.32
GABPB1-203ENST00000380877 CACNA2D3Q8IZS8 1091 aa13.05□□□□□ -0.32
GABPB1-203ENST00000380877 DNAAF3Q8N9W5 541 aa13.05□□□□□ -0.32
GABPB1-203ENST00000380877 PRPF31Q8WWY3 499 aaKnown RBP13.05□□□□□ -0.32
GABPB1-203ENST00000380877 CFAP57Q96MR6 1250 aa13.05□□□□□ -0.32
GABPB1-203ENST00000380877 FHDC1Q9C0D6 1143 aaPredicted RBP13.05□□□□□ -0.32
GABPB1-203ENST00000380877 RASGRF2O14827 1237 aa13.04□□□□□ -0.32
GABPB1-203ENST00000380877 RARBP10826 455 aa13.04□□□□□ -0.32
GABPB1-203ENST00000380877 ARHGAP25P42331 645 aa13.04□□□□□ -0.32
GABPB1-203ENST00000380877 TSPY1Q01534 308 aa13.04□□□□□ -0.32
GABPB1-203ENST00000380877 GNASQ5JWF2 1037 aa13.04□□□□□ -0.32
GABPB1-203ENST00000380877 ANKRD20A3Q5VUR7 823 aa13.04□□□□□ -0.32
GABPB1-203ENST00000380877 METTL7BQ6UX53 244 aa13.04□□□□□ -0.32
GABPB1-203ENST00000380877 SCN4BQ8IWT1 228 aa13.04□□□□□ -0.32
GABPB1-203ENST00000380877 REXO1L1PQ8IX06 675 aa13.04□□□□□ -0.32
GABPB1-203ENST00000380877 CPA5Q8WXQ8 436 aa13.04□□□□□ -0.32
GABPB1-203ENST00000380877 A1CFQ9NQ94 594 aaKnown RBP13.04□□□□□ -0.32
GABPB1-203ENST00000380877 DBR1Q9UK59 544 aaKnown RBP13.04□□□□□ -0.32
GABPB1-203ENST00000380877 GIPC1O14908 333 aa13.04□□□□□ -0.32
GABPB1-203ENST00000380877 CHRNA3P32297 505 aa13.04□□□□□ -0.32
GABPB1-203ENST00000380877 NAMPTP43490 491 aa13.04□□□□□ -0.32
GABPB1-203ENST00000380877 CLCN3P51790 818 aa13.04□□□□□ -0.32
GABPB1-203ENST00000380877 MDM2Q00987 491 aaPredicted RBP13.04□□□□□ -0.32
GABPB1-203ENST00000380877 GKAP1Q5VSY0 366 aaPredicted RBP13.04□□□□□ -0.32
GABPB1-203ENST00000380877 HAS1Q92839 578 aa13.04□□□□□ -0.32
GABPB1-203ENST00000380877 ZMYND15Q9H091 742 aa13.04□□□□□ -0.32
GABPB1-203ENST00000380877 TFR2Q9UP52 801 aa13.04□□□□□ -0.32
GABPB1-203ENST00000380877 ACSL3O95573 720 aa13.04□□□□□ -0.32
GABPB1-203ENST00000380877 TROVE2P10155 538 aaKnown RBP eCLIP13.04□□□□□ -0.32
GABPB1-203ENST00000380877 EIF3BP55884 814 aaKnown RBP13.04□□□□□ -0.32
GABPB1-203ENST00000380877 BZW1Q7L1Q6 419 aaKnown RBP13.04□□□□□ -0.32
GABPB1-203ENST00000380877 PLEKHH3Q7Z736 793 aa13.04□□□□□ -0.32
GABPB1-203ENST00000380877 TRIM59Q8IWR1 403 aa13.04□□□□□ -0.32
GABPB1-203ENST00000380877 C18orf8Q96DM3 657 aa13.04□□□□□ -0.32
GABPB1-203ENST00000380877 A0A087X0T9 212 aa13.04□□□□□ -0.32
GABPB1-203ENST00000380877 RRN3P2A6NIE6 340 aa13.04□□□□□ -0.32
GABPB1-203ENST00000380877 CRCPO75575 148 aa13.04□□□□□ -0.32
GABPB1-203ENST00000380877 FAM228BP0C875 321 aa13.04□□□□□ -0.32
GABPB1-203ENST00000380877 PDE1BQ01064 536 aa13.04□□□□□ -0.32
GABPB1-203ENST00000380877 MAPK8IP2Q13387 824 aaPredicted RBP13.04□□□□□ -0.32
GABPB1-203ENST00000380877 PLCD3Q8N3E9 789 aa13.04□□□□□ -0.32
GABPB1-203ENST00000380877 BBS5Q8N3I7 341 aa13.04□□□□□ -0.32
GABPB1-203ENST00000380877 ZNF384Q8TF68 577 aa13.04□□□□□ -0.32
GABPB1-203ENST00000380877 STAP1Q9ULZ2 295 aa13.04□□□□□ -0.32
GABPB1-203ENST00000380877 ROBO3Q96MS0 1386 aa13.03□□□□□ -0.32
GABPB1-203ENST00000380877 IL18RAPO95256 599 aa13.03□□□□□ -0.32
GABPB1-203ENST00000380877 TGFB3P10600 412 aa13.03□□□□□ -0.32
GABPB1-203ENST00000380877 ADCY1Q08828 1119 aa13.03□□□□□ -0.32
GABPB1-203ENST00000380877 MAP7D1Q3KQU3 841 aa13.03□□□□□ -0.32
GABPB1-203ENST00000380877 TNIP3Q96KP6 325 aa13.03□□□□□ -0.32
GABPB1-203ENST00000380877 DUSP9Q99956 384 aaKnown RBP13.03□□□□□ -0.32
GABPB1-203ENST00000380877 ASCC2Q9H1I8 757 aaPredicted RBP13.03□□□□□ -0.32
GABPB1-203ENST00000380877 SLITRK6Q9H5Y7 841 aa13.03□□□□□ -0.32
GABPB1-203ENST00000380877 KCNMB3Q9NPA1 279 aa13.03□□□□□ -0.32
GABPB1-203ENST00000380877 HEY1Q9Y5J3 304 aa13.03□□□□□ -0.32
GABPB1-203ENST00000380877 EXOC1LA0A1B0GW35 172 aa13.03□□□□□ -0.32
GABPB1-203ENST00000380877 CNTN2Q02246 1040 aa13.03□□□□□ -0.32
GABPB1-203ENST00000380877 VGLL4Q14135 290 aa13.03□□□□□ -0.32
GABPB1-203ENST00000380877 SEZ6Q53EL9 994 aa13.03□□□□□ -0.32
GABPB1-203ENST00000380877 CENPUQ71F23 418 aa13.03□□□□□ -0.32
GABPB1-203ENST00000380877 PKNOX2Q96KN3 472 aa13.03□□□□□ -0.32
GABPB1-203ENST00000380877 NIF3L1Q9GZT8 377 aa13.03□□□□□ -0.32
GABPB1-203ENST00000380877 TBK1Q9UHD2 729 aa13.03□□□□□ -0.32
GABPB1-203ENST00000380877 OGTO15294 1046 aa13.03□□□□□ -0.32
GABPB1-203ENST00000380877 TMEM253P0C7T8 217 aa13.03□□□□□ -0.32
GABPB1-203ENST00000380877 KRT3P12035 628 aa13.03□□□□□ -0.32
GABPB1-203ENST00000380877 ZNF131P52739 623 aa13.03□□□□□ -0.32
GABPB1-203ENST00000380877 TAP1Q03518 808 aa13.03□□□□□ -0.32
GABPB1-203ENST00000380877 PPATQ06203 517 aa13.03□□□□□ -0.32
GABPB1-203ENST00000380877 BTNL9Q6UXG8 535 aa13.03□□□□□ -0.32
GABPB1-203ENST00000380877 MMS22LQ6ZRQ5 1243 aa13.03□□□□□ -0.32
GABPB1-203ENST00000380877 AMIGO3Q86WK7 504 aa13.03□□□□□ -0.32
GABPB1-203ENST00000380877 CCT6BQ92526 530 aa13.03□□□□□ -0.32
GABPB1-203ENST00000380877 NOVA2Q9UNW9 492 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms