RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 RGMBQ6NW40 437 aa20.76■□□□□ 0.91
GMDS-201ENST00000380805 ZNF467Q7Z7K2 595 aaPredicted RBP20.76■□□□□ 0.91
GMDS-201ENST00000380805 PALB2Q86YC2 1186 aa20.76■□□□□ 0.91
GMDS-201ENST00000380805 DHX37Q8IY37 1157 aaKnown RBP20.76■□□□□ 0.91
GMDS-201ENST00000380805 PPM1KQ8N3J5 372 aa20.76■□□□□ 0.91
GMDS-201ENST00000380805 UBXN6Q9BZV1 441 aa20.76■□□□□ 0.91
GMDS-201ENST00000380805 EFCC1Q9HA90 598 aa20.76■□□□□ 0.91
GMDS-201ENST00000380805 ABCB6Q9NP58 842 aa20.76■□□□□ 0.91
GMDS-201ENST00000380805 L1RE1Q9UN81 338 aa20.76■□□□□ 0.91
GMDS-201ENST00000380805 ZNF236Q9UL36 1845 aa20.76■□□□□ 0.91
GMDS-201ENST00000380805 EDN1P05305 212 aa20.75■□□□□ 0.91
GMDS-201ENST00000380805 GZMAP12544 262 aa20.75■□□□□ 0.91
GMDS-201ENST00000380805 CXCR5P32302 372 aa20.75■□□□□ 0.91
GMDS-201ENST00000380805 GTF2A2P52657 109 aa20.75■□□□□ 0.91
GMDS-201ENST00000380805 NLRP11P59045 1033 aaKnown RBP20.75■□□□□ 0.91
GMDS-201ENST00000380805 MKRN4PQ13434 485 aaPredicted RBP20.75■□□□□ 0.91
GMDS-201ENST00000380805 MXD4Q14582 209 aaPredicted RBP20.75■□□□□ 0.91
GMDS-201ENST00000380805 PLCB4Q15147 1175 aa20.75■□□□□ 0.91
GMDS-201ENST00000380805 CCDC181Q5TID7 509 aa20.75■□□□□ 0.91
GMDS-201ENST00000380805 ANKRD23Q86SG2 305 aa20.75■□□□□ 0.91
GMDS-201ENST00000380805 SLC20A1Q8WUM9 679 aa20.75■□□□□ 0.91
GMDS-201ENST00000380805 CTNNBL1Q8WYA6 563 aaPredicted RBP20.75■□□□□ 0.91
GMDS-201ENST00000380805 ZNF516Q92618 1163 aa20.75■□□□□ 0.91
GMDS-201ENST00000380805 SPATA33Q96N06 139 aa20.75■□□□□ 0.91
GMDS-201ENST00000380805 JPH2Q9BR39 696 aaPredicted RBP20.75■□□□□ 0.91
GMDS-201ENST00000380805 SMARCAD1Q9H4L7 1026 aa20.75■□□□□ 0.91
GMDS-201ENST00000380805 SUCLA2Q9P2R7 463 aaPredicted RBP20.75■□□□□ 0.91
GMDS-201ENST00000380805 RBM47A0AV96 593 aaKnown RBP20.75■□□□□ 0.91
GMDS-201ENST00000380805 C4BPAP04003 597 aaKnown RBP20.75■□□□□ 0.91
GMDS-201ENST00000380805 NOP2P46087 812 aaKnown RBP20.75■□□□□ 0.91
GMDS-201ENST00000380805 GCLCP48506 637 aaPredicted RBP20.75■□□□□ 0.91
GMDS-201ENST00000380805 DRP2Q13474 957 aa20.75■□□□□ 0.91
GMDS-201ENST00000380805 RPS6KA1Q15418 735 aa20.75■□□□□ 0.91
GMDS-201ENST00000380805 ARMCX2Q7L311 632 aa20.75■□□□□ 0.91
GMDS-201ENST00000380805 DNAAF5Q86Y56 855 aa20.75■□□□□ 0.91
GMDS-201ENST00000380805 PRPF31Q8WWY3 499 aaKnown RBP20.75■□□□□ 0.91
GMDS-201ENST00000380805 GLG1Q92896 1179 aa20.75■□□□□ 0.91
GMDS-201ENST00000380805 PBKQ96KB5 322 aa20.75■□□□□ 0.91
GMDS-201ENST00000380805 PCNTO95613 3336 aa20.75■□□□□ 0.91
GMDS-201ENST00000380805 PDHXO00330 501 aa20.74■□□□□ 0.91
GMDS-201ENST00000380805 MSCO60682 206 aa20.74■□□□□ 0.91
GMDS-201ENST00000380805 DLATP10515 647 aaKnown RBP20.74■□□□□ 0.91
GMDS-201ENST00000380805 TXNP10599 105 aaKnown RBP20.74■□□□□ 0.91
GMDS-201ENST00000380805 CHRNB2P17787 502 aa20.74■□□□□ 0.91
GMDS-201ENST00000380805 PLA2G4AP47712 749 aa20.74■□□□□ 0.91
GMDS-201ENST00000380805 CBX1P83916 185 aa20.74■□□□□ 0.91
GMDS-201ENST00000380805 CCDC70Q6NSX1 233 aa20.74■□□□□ 0.91
GMDS-201ENST00000380805 NOP9Q86U38 636 aaKnown RBP20.74■□□□□ 0.91
GMDS-201ENST00000380805 TRIM50Q86XT4 487 aa20.74■□□□□ 0.91
GMDS-201ENST00000380805 RASAL3Q86YV0 1011 aa20.74■□□□□ 0.91
GMDS-201ENST00000380805 RHOT2Q8IXI1 618 aa20.74■□□□□ 0.91
GMDS-201ENST00000380805 PSMB7Q99436 277 aa20.74■□□□□ 0.91
GMDS-201ENST00000380805 TARS2Q9BW92 718 aaKnown RBP20.74■□□□□ 0.91
GMDS-201ENST00000380805 VTA1Q9NP79 307 aa20.74■□□□□ 0.91
GMDS-201ENST00000380805 TAS2R14Q9NYV8 317 aa20.74■□□□□ 0.91
GMDS-201ENST00000380805 BTBD19C9JJ37 291 aa20.73■□□□□ 0.91
GMDS-201ENST00000380805 FAM189A1O60320 539 aa20.73■□□□□ 0.91
GMDS-201ENST00000380805 GRM1Q13255 1194 aa20.73■□□□□ 0.91
GMDS-201ENST00000380805 GLE1Q53GS7 698 aaKnown RBP20.73■□□□□ 0.91
GMDS-201ENST00000380805 CYP4F22Q6NT55 531 aa20.73■□□□□ 0.91
GMDS-201ENST00000380805 NT5DC3Q86UY8 548 aa20.73■□□□□ 0.91
GMDS-201ENST00000380805 SLC35G2Q8TBE7 412 aa20.73■□□□□ 0.91
GMDS-201ENST00000380805 UBE2Q2Q8WVN8 375 aa20.73■□□□□ 0.91
GMDS-201ENST00000380805 EMID1Q96A84 441 aaPredicted RBP20.73■□□□□ 0.91
GMDS-201ENST00000380805 HES6Q96HZ4 224 aa20.73■□□□□ 0.91
GMDS-201ENST00000380805 MSTO1Q9BUK6 570 aa20.73■□□□□ 0.91
GMDS-201ENST00000380805 C2orf40Q9H1Z8 148 aa20.73■□□□□ 0.91
GMDS-201ENST00000380805 CNTNAP2Q9UHC6 1331 aa20.73■□□□□ 0.91
GMDS-201ENST00000380805 CEP350Q5VT06 3117 aa20.73■□□□□ 0.91
GMDS-201ENST00000380805 FAM155AB1AL88 458 aaPredicted RBP20.73■□□□□ 0.91
GMDS-201ENST00000380805 STRNO43815 780 aa20.73■□□□□ 0.91
GMDS-201ENST00000380805 HBP1O60381 514 aa20.73■□□□□ 0.91
GMDS-201ENST00000380805 RTN2O75298 545 aa20.73■□□□□ 0.91
GMDS-201ENST00000380805 SGPL1O95470 568 aa20.73■□□□□ 0.91
GMDS-201ENST00000380805 WNT7BP56706 349 aa20.73■□□□□ 0.91
GMDS-201ENST00000380805 ARHGAP1Q07960 439 aa20.73■□□□□ 0.91
GMDS-201ENST00000380805 LAMTOR4Q0VGL1 99 aa20.73■□□□□ 0.91
GMDS-201ENST00000380805 DEFB115Q30KQ5 88 aa20.73■□□□□ 0.91
GMDS-201ENST00000380805 WDR78Q5VTH9 848 aa20.73■□□□□ 0.91
GMDS-201ENST00000380805 SPRYD7Q5W111 196 aa20.73■□□□□ 0.91
GMDS-201ENST00000380805 SMYD5Q6GMV2 418 aa20.73■□□□□ 0.91
GMDS-201ENST00000380805 TAPT1Q6NXT6 567 aa20.73■□□□□ 0.91
GMDS-201ENST00000380805 RPUSD2Q8IZ73 545 aaKnown RBP20.73■□□□□ 0.91
GMDS-201ENST00000380805 ACTRT1Q8TDG2 376 aa20.73■□□□□ 0.91
GMDS-201ENST00000380805 BRI3BPQ8WY22 251 aa20.73■□□□□ 0.91
GMDS-201ENST00000380805 TAF4BQ92750 862 aa20.73■□□□□ 0.91
GMDS-201ENST00000380805 ZBTB45Q96K62 511 aaPredicted RBP20.73■□□□□ 0.91
GMDS-201ENST00000380805 FNBP1Q96RU3 617 aa20.73■□□□□ 0.91
GMDS-201ENST00000380805 CGRRF1Q99675 332 aa20.73■□□□□ 0.91
GMDS-201ENST00000380805 MRPL4Q9BYD3 311 aaKnown RBP20.73■□□□□ 0.91
GMDS-201ENST00000380805 RBAKQ9NYW8 714 aaPredicted RBP20.73■□□□□ 0.91
GMDS-201ENST00000380805 TMEM59LQ9UK28 342 aa20.73■□□□□ 0.91
GMDS-201ENST00000380805 PACSIN2Q9UNF0 486 aaPredicted RBP20.73■□□□□ 0.91
GMDS-201ENST00000380805 CCL15-CCL14A0A0B4J2E2 113 aa20.72■□□□□ 0.91
GMDS-201ENST00000380805 CYP26A1O43174 497 aa20.72■□□□□ 0.91
GMDS-201ENST00000380805 TOM1L1O75674 476 aa20.72■□□□□ 0.91
GMDS-201ENST00000380805 MTA2O94776 668 aa20.72■□□□□ 0.91
GMDS-201ENST00000380805 CYP11B1P15538 503 aa20.72■□□□□ 0.91
GMDS-201ENST00000380805 FMO1Q01740 532 aa20.72■□□□□ 0.91
GMDS-201ENST00000380805 CDR2Q01850 454 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms