RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 CHGBP05060 677 aa16.98■□□□□ 0.31
COL2A1-202ENST00000380518 UCHL3P15374 230 aa16.98■□□□□ 0.31
COL2A1-202ENST00000380518 FXR1P51114 621 aaKnown RBP eCLIP16.98■□□□□ 0.31
COL2A1-202ENST00000380518 EDRF1Q3B7T1 1238 aa16.98■□□□□ 0.31
COL2A1-202ENST00000380518 HSPBP1Q9NZL4 362 aa16.98■□□□□ 0.31
COL2A1-202ENST00000380518 ABT1Q9ULW3 272 aaKnown RBP16.98■□□□□ 0.31
COL2A1-202ENST00000380518 RNF103-CHMP3A0A140T963 221 aa16.97■□□□□ 0.31
COL2A1-202ENST00000380518 AGTP01019 485 aa16.97■□□□□ 0.31
COL2A1-202ENST00000380518 GALCP54803 685 aa16.97■□□□□ 0.31
COL2A1-202ENST00000380518 EFTUD2Q15029 972 aaKnown RBP eCLIP16.97■□□□□ 0.316e-7■■■■■ 47.1
COL2A1-202ENST00000380518 KCNV1Q6PIU1 500 aa16.97■□□□□ 0.31
COL2A1-202ENST00000380518 CNPY4Q8N129 248 aa16.97■□□□□ 0.31
COL2A1-202ENST00000380518 ABTB1Q969K4 478 aaPredicted RBP16.97■□□□□ 0.31
COL2A1-202ENST00000380518 TNIP3Q96KP6 325 aa16.97■□□□□ 0.31
COL2A1-202ENST00000380518 IQGAP3Q86VI3 1631 aa16.97■□□□□ 0.31
COL2A1-202ENST00000380518 PDS5AQ29RF7 1337 aaKnown RBP16.97■□□□□ 0.31
COL2A1-202ENST00000380518 IMPG1Q17R60 797 aa16.97■□□□□ 0.31
COL2A1-202ENST00000380518 XKR3Q5GH77 459 aa16.97■□□□□ 0.31
COL2A1-202ENST00000380518 C1orf228Q6PIY5 440 aa16.97■□□□□ 0.31
COL2A1-202ENST00000380518 OR6P1Q8NGX9 317 aa16.97■□□□□ 0.31
COL2A1-202ENST00000380518 MMP19Q99542 508 aa16.97■□□□□ 0.31
COL2A1-202ENST00000380518 WWP1Q9H0M0 922 aa16.97■□□□□ 0.31
COL2A1-202ENST00000380518 DAGLAQ9Y4D2 1042 aa16.97■□□□□ 0.31
COL2A1-202ENST00000380518 CFAP69A5D8W1 941 aa16.97■□□□□ 0.31
COL2A1-202ENST00000380518 STAT5BP51692 787 aa16.97■□□□□ 0.31
COL2A1-202ENST00000380518 EIF3EP60228 445 aaKnown RBP16.97■□□□□ 0.31
COL2A1-202ENST00000380518 STK4Q13043 487 aa16.97■□□□□ 0.31
COL2A1-202ENST00000380518 NME3Q13232 169 aa16.97■□□□□ 0.31
COL2A1-202ENST00000380518 RGS9BPQ6ZS82 235 aa16.97■□□□□ 0.31
COL2A1-202ENST00000380518 PID1Q7Z2X4 250 aa16.97■□□□□ 0.31
COL2A1-202ENST00000380518 RNF149Q8NC42 400 aa16.97■□□□□ 0.31
COL2A1-202ENST00000380518 C18orf8Q96DM3 657 aa16.97■□□□□ 0.31
COL2A1-202ENST00000380518 ECT2Q9H8V3 914 aa16.97■□□□□ 0.31
COL2A1-202ENST00000380518 KCND2Q9NZV8 630 aa16.97■□□□□ 0.31
COL2A1-202ENST00000380518 WDR35Q9P2L0 1181 aa16.97■□□□□ 0.31
COL2A1-202ENST00000380518 APOL1O14791 398 aa16.97■□□□□ 0.31
COL2A1-202ENST00000380518 PPP1R12AO14974 1030 aaPredicted RBP16.97■□□□□ 0.31
COL2A1-202ENST00000380518 MCF2P10911 925 aa16.97■□□□□ 0.31
COL2A1-202ENST00000380518 FMO5P49326 533 aa16.97■□□□□ 0.31
COL2A1-202ENST00000380518 SF3B3Q15393 1217 aaKnown RBP16.97■□□□□ 0.31
COL2A1-202ENST00000380518 RASSF3Q86WH2 238 aa16.97■□□□□ 0.31
COL2A1-202ENST00000380518 KCNF1Q9H3M0 494 aa16.97■□□□□ 0.31
COL2A1-202ENST00000380518 RPAP3Q9H6T3 665 aaPredicted RBP16.97■□□□□ 0.31
COL2A1-202ENST00000380518 HACD3Q9P035 362 aa16.97■□□□□ 0.31
COL2A1-202ENST00000380518 ANP32DO95626 131 aa16.96■□□□□ 0.31
COL2A1-202ENST00000380518 FGFR4P22455 802 aa16.96■□□□□ 0.31
COL2A1-202ENST00000380518 WDR72Q3MJ13 1102 aa16.96■□□□□ 0.31
COL2A1-202ENST00000380518 ANO5Q75V66 913 aa16.96■□□□□ 0.31
COL2A1-202ENST00000380518 RCOR2Q8IZ40 523 aa16.96■□□□□ 0.31
COL2A1-202ENST00000380518 CEP19Q96LK0 163 aa16.96■□□□□ 0.31
COL2A1-202ENST00000380518 SP110Q9HB58 689 aa16.96■□□□□ 0.31
COL2A1-202ENST00000380518 ADA2Q9NZK5 511 aa16.96■□□□□ 0.31
COL2A1-202ENST00000380518 ZFATQ9P243 1243 aa16.96■□□□□ 0.31
COL2A1-202ENST00000380518 ARHGEF40Q8TER5 1519 aa16.96■□□□□ 0.31
COL2A1-202ENST00000380518 NPHP3-ACAD11A0A0J9YXS1 232 aa16.96■□□□□ 0.31
COL2A1-202ENST00000380518 ASB14A6NK59 587 aa16.96■□□□□ 0.31
COL2A1-202ENST00000380518 GUCY1A3Q02108 690 aa16.96■□□□□ 0.31
COL2A1-202ENST00000380518 TEX2Q8IWB9 1127 aa16.96■□□□□ 0.31
COL2A1-202ENST00000380518 URGCPQ8TCY9 931 aa16.96■□□□□ 0.31
COL2A1-202ENST00000380518 GLI2P10070 1586 aa16.96■□□□□ 0.31
COL2A1-202ENST00000380518 FLT1P17948 1338 aa16.96■□□□□ 0.31
COL2A1-202ENST00000380518 E5RI56 91 aa16.96■□□□□ 0.31
COL2A1-202ENST00000380518 CAPRIN1Q14444 709 aaKnown RBP16.96■□□□□ 0.31
COL2A1-202ENST00000380518 LMBRD2Q68DH5 695 aaPredicted RBP16.96■□□□□ 0.31
COL2A1-202ENST00000380518 SLC35G2Q8TBE7 412 aa16.96■□□□□ 0.31
COL2A1-202ENST00000380518 REEP2Q9BRK0 252 aa16.96■□□□□ 0.31
COL2A1-202ENST00000380518 NYAP2Q9P242 653 aa16.96■□□□□ 0.31
COL2A1-202ENST00000380518 WARS2Q9UGM6 360 aaKnown RBP16.96■□□□□ 0.31
COL2A1-202ENST00000380518 CDH16O75309 829 aa16.96■□□□□ 0.3
COL2A1-202ENST00000380518 PRKCBP05771 671 aa16.96■□□□□ 0.3
COL2A1-202ENST00000380518 AGPAT5Q9NUQ2 364 aa16.96■□□□□ 0.3
COL2A1-202ENST00000380518 POLIQ9UNA4 740 aa16.96■□□□□ 0.3
COL2A1-202ENST00000380518 SMG5Q9UPR3 1016 aaKnown RBP16.96■□□□□ 0.3
COL2A1-202ENST00000380518 F5H423 210 aaPredicted RBP16.95■□□□□ 0.3
COL2A1-202ENST00000380518 ZNF185O15231 689 aa16.95■□□□□ 0.3
COL2A1-202ENST00000380518 GANCQ8TET4 914 aa16.95■□□□□ 0.3
COL2A1-202ENST00000380518 SIK2Q9H0K1 926 aa16.95■□□□□ 0.3
COL2A1-202ENST00000380518 TRABDQ9H4I3 376 aa16.95■□□□□ 0.3
COL2A1-202ENST00000380518 NDUFB10O96000 172 aa16.95■□□□□ 0.3
COL2A1-202ENST00000380518 RAPGEF5Q92565 580 aa16.95■□□□□ 0.3
COL2A1-202ENST00000380518 TULP4Q9NRJ4 1543 aa16.95■□□□□ 0.3
COL2A1-202ENST00000380518 MYMKA6NI61 221 aa16.95■□□□□ 0.3
COL2A1-202ENST00000380518 PIK3R2O00459 728 aa16.95■□□□□ 0.3
COL2A1-202ENST00000380518 PHF2O75151 1096 aa16.95■□□□□ 0.3
COL2A1-202ENST00000380518 CSF1RP07333 972 aa16.95■□□□□ 0.3
COL2A1-202ENST00000380518 MDH1P40925 334 aaKnown RBP16.95■□□□□ 0.3
COL2A1-202ENST00000380518 CDK17Q00537 523 aa16.95■□□□□ 0.3
COL2A1-202ENST00000380518 STILQ15468 1287 aa16.95■□□□□ 0.3
COL2A1-202ENST00000380518 SPATA21Q7Z572 469 aa16.95■□□□□ 0.3
COL2A1-202ENST00000380518 TBC1D16Q8TBP0 767 aa16.95■□□□□ 0.3
COL2A1-202ENST00000380518 TMCC1O94876 653 aa16.95■□□□□ 0.3
COL2A1-202ENST00000380518 MOCS2O96007 188 aaPredicted RBP16.95■□□□□ 0.3
COL2A1-202ENST00000380518 ITIH2P19823 946 aa16.95■□□□□ 0.3
COL2A1-202ENST00000380518 TMED1Q13445 227 aa16.95■□□□□ 0.3
COL2A1-202ENST00000380518 FASTKD1Q53R41 847 aaKnown RBP16.95■□□□□ 0.3
COL2A1-202ENST00000380518 TC2NQ8N9U0 490 aa16.95■□□□□ 0.3
COL2A1-202ENST00000380518 AFG1LQ8WV93 481 aa16.95■□□□□ 0.3
COL2A1-202ENST00000380518 OTUD5Q96G74 571 aa16.95■□□□□ 0.3
COL2A1-202ENST00000380518 SPON2Q9BUD6 331 aa16.95■□□□□ 0.3
COL2A1-202ENST00000380518 SARS2Q9NP81 518 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms